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The map label for this gene is ccsA [H]

Identifier: 187736549

GI number: 187736549

Start: 2518313

End: 2520964

Strand: Reverse

Name: ccsA [H]

Synonym: Amuc_2071

Alternate gene names: 187736549

Gene position: 2520964-2518313 (Counterclockwise)

Preceding gene: 187736550

Following gene: 187736546

Centisome position: 94.63

GC content: 58.11

Gene sequence:

>2652_bases
ATGGACAGGGAACGAACGGATGCGGTATGGAAAAAATATGGACGCAGCCTCTGGAATTTTGCCGGAAGCTACGGCTTAGG
CATTGCCCTGATGCTGATCCTTCTGGTGCTGACCTTTGCCGGGACGCTGCACCAGGTGCGGTTGTCTTCTGCCATGGGGT
CGGAGGCTGCCATAGAGTCTTTTTTCGGGGCGGCTTATGTGCTGATACCGCTGGGCGGGGAGAACTCCCTGATTTCCCTG
CCTTTGCCCGGCATGGGCATTACTTGTGTCCTGCTGTTCGCCAACCTGCTCATAGGCGGGGTATTCCGTATCCGGTGGAC
CTGGAGGCACGCAGGCGTGCTGGTGGCTCATGGGGGAATTTTGCTGCTGCTGGCCGGCATCATGCTGGGCAACAAAATGA
CGGTGGCTGTGGAACAGGTGGAACTGCCCCAGGGGGACCGGGTGCACGAGTATTCCCTTCCGTTTGATTTGCGCCTGAAC
CGCTTTGTGCCGGAGTTTTATCCGGGGACTTCCAAGCCTAAATCCTATGAATCCCAGATAACCGTTTTTCCGGAATCCGG
CGGTCAGTATGACGCCGTTATCCGCATGAATGAGCCTCTGCGCCTTTCCGGCTGGACGCTGTACCAGATGAGCTGGGGCC
AGGATTCCCTGCATCCGGGCAGGCTTATCTCCATTCTCCGTGCTTCCCATAATCCCCTGGAGCAAATGCCCAAATGGTCC
TCCTACATCATCGCTGTAGGGCTGCTGTGGCATTTTGCCTGTGTTTTTGGCAGATACCTGCGCCGCAAACCCGGTCTGGC
ATCTGCCGGAACGGCGGCGACGGATGAACTGCAGGCCGTTTCCGCCCCCGGCGGAAAAAAACGTCTGCGCCTGGCTGGCA
TTTGCCTGCTGGTAGCGGCCATCTTCGGCATCGGCATGCTGGCGGCGCGGCCTGACGTCCATCCGGTTCTGGTGGAACAT
TATGTGCCCTGGTCTCCCTTTTTGGTGGAGCGGGCCGGGGCCATGGCCGTCCAGGACGGCGGCCGCCTGAAGCCTGTTTC
TACTTATGCGGGCTTCCATCTGCTCCGGACACTGGGCAAAAGAAGCTTTGTTGTTGATACGCCGGAAGGGAAAAGGAAGC
TCTCCCCGGTGGAATGGATGCTGGACTGCATGTTCCGTCCGGAACTGGCGGAACAATACCCTGTTTTTCTGGTCAATCGG
GAAGAGGTGGTCAGGCGCCTGCACCTGCCGGACCAGAAAGACAAGCGTAAAAAATACTCCTACGCGCAGCTTGCGGAACG
CTGGGAGGAAATGACCCGTGCCGTCCGGGAAATCCGTTTGCTGGGAGAAACTAATCTGACAGAAGCCCAGAAGGAAATTT
TGTCCCTTGCCCGCAACTTTGATGTGATGCGGGGCTGGATGCTTGTCTCCCGGATCATGCTGGAAAACCCTGCCGCCATG
GAACGGATGGAATTCCCACGCTGGTTTCCTTCTGCCGGCCGCGATGGAGAACGCCTGTGGACGGCTTCCCCGGATAAAGC
TGCCGGAGCCTTTTTGGCAATGGCGTCCCTGCTGGAACGCAAAGCTATCGGCATGGCAGGGGCGGAGGCTTCCGCACTGC
GGATGAAAGCGGAAGGACTGCTGCTGGAAAAGCTGGCGCAACCCAATGAAGCCGCCTCCGCCGGAGAGCGGCACAGCCTG
GAAAGAGAAATTTTCTACTACCGTCTGGATCCGCTTTATGTTTCCCTGGCCGTTTTTGTGGCGGCGTTCGTGTGTCTGCT
GCTCTGCGCACTTTTCCGCCCAGCCGCCAACGCTCCCCTCTGGCGGCGTTTTCTCCGGCCCGGAGGTTTCAGCCTGGCGT
GGCTGACAGGCGCGGGCGGAGCCGGAGTGCTGGTTGCGGCGCTGGTCATCCGCGTGCTCATCACCATGAGGTCCCCGGTG
GGCAACACGTATGAAACCATCGCCTTTATCGCCTGCATGGGAGTTCTCTGCGCTCTTGTGGTGGAACTTTTCAGTAAAAA
GGGAATTGTACTGGCGGCCGGGCTTTTGCTTGGGGCTTTCTCCTGTCAGATGGGTATTTTGTATGAATCCTCCCAGGCTG
TGGACCATATGGATCCCCTGGTGGCCATCCTGCGCTCCAACTTCCTGCTTTCCACCCATGTCATTACCATTGTGCTGGGG
TACGCGGCCGGGTTGCTGGCGGCGGTGCTCTCCCATATATACCTGCTGGCTTCCCCCTTGCGCCTGATTGGCGGAAAAAC
GGAACAATCCCTGGACCGCATGGCTTACGGCATCTTGTGTTTTTCCCTGGTGTTTACGCTGGTGGGAACGGTTTTTGGGG
GGATTTGGGGCAATGAATCCTGGGGGCGCTTCTGGGGCTGGGATCCCAAGGAAAACGGAGCGTTGATGATTGTACTGTGG
CAATTGACCGTATTGCATGCCCGGAAAGCCGGATGGCTGTCTTCCTGGCTGCTCCACTTCAGCAATGTAGTGGGCGGCGT
TATCATTGCCTTTGCCTGGTGGGGCGTCAATATGCTGGGAGTGGGGCTGCACTCCTACGGTTTCACTTCCGGTCGGGATG
CGTTAGACATGTTCTATTGGTCCGAAGCTGTATTGTGCGTCCTCTTCATTATCCTGCATTACCGCGCGCTCCGGCGCGTA
GATGTCAGGTAG

Upstream 100 bases:

>100_bases
TAACTTTTAATAACCTTTTCTCCAGGAATATGATTGGGGCCGGTTTCACGAGTTGATCGTGCAATCGGCCCTCTTTTTGG
ACTACGGACGCCTTACGCTG

Downstream 100 bases:

>100_bases
GGAAACAGGTTTCGGAAATAATACGGAAACATATTCCCGGAAAGGAACAGGAAATCTTTGTCTGCCTTCTTTCCTTTTTC
TGTAATTTGCGGTGTCCGGA

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 883; Mature: 883

Protein sequence:

>883_residues
MDRERTDAVWKKYGRSLWNFAGSYGLGIALMLILLVLTFAGTLHQVRLSSAMGSEAAIESFFGAAYVLIPLGGENSLISL
PLPGMGITCVLLFANLLIGGVFRIRWTWRHAGVLVAHGGILLLLAGIMLGNKMTVAVEQVELPQGDRVHEYSLPFDLRLN
RFVPEFYPGTSKPKSYESQITVFPESGGQYDAVIRMNEPLRLSGWTLYQMSWGQDSLHPGRLISILRASHNPLEQMPKWS
SYIIAVGLLWHFACVFGRYLRRKPGLASAGTAATDELQAVSAPGGKKRLRLAGICLLVAAIFGIGMLAARPDVHPVLVEH
YVPWSPFLVERAGAMAVQDGGRLKPVSTYAGFHLLRTLGKRSFVVDTPEGKRKLSPVEWMLDCMFRPELAEQYPVFLVNR
EEVVRRLHLPDQKDKRKKYSYAQLAERWEEMTRAVREIRLLGETNLTEAQKEILSLARNFDVMRGWMLVSRIMLENPAAM
ERMEFPRWFPSAGRDGERLWTASPDKAAGAFLAMASLLERKAIGMAGAEASALRMKAEGLLLEKLAQPNEAASAGERHSL
EREIFYYRLDPLYVSLAVFVAAFVCLLLCALFRPAANAPLWRRFLRPGGFSLAWLTGAGGAGVLVAALVIRVLITMRSPV
GNTYETIAFIACMGVLCALVVELFSKKGIVLAAGLLLGAFSCQMGILYESSQAVDHMDPLVAILRSNFLLSTHVITIVLG
YAAGLLAAVLSHIYLLASPLRLIGGKTEQSLDRMAYGILCFSLVFTLVGTVFGGIWGNESWGRFWGWDPKENGALMIVLW
QLTVLHARKAGWLSSWLLHFSNVVGGVIIAFAWWGVNMLGVGLHSYGFTSGRDALDMFYWSEAVLCVLFIILHYRALRRV
DVR

Sequences:

>Translated_883_residues
MDRERTDAVWKKYGRSLWNFAGSYGLGIALMLILLVLTFAGTLHQVRLSSAMGSEAAIESFFGAAYVLIPLGGENSLISL
PLPGMGITCVLLFANLLIGGVFRIRWTWRHAGVLVAHGGILLLLAGIMLGNKMTVAVEQVELPQGDRVHEYSLPFDLRLN
RFVPEFYPGTSKPKSYESQITVFPESGGQYDAVIRMNEPLRLSGWTLYQMSWGQDSLHPGRLISILRASHNPLEQMPKWS
SYIIAVGLLWHFACVFGRYLRRKPGLASAGTAATDELQAVSAPGGKKRLRLAGICLLVAAIFGIGMLAARPDVHPVLVEH
YVPWSPFLVERAGAMAVQDGGRLKPVSTYAGFHLLRTLGKRSFVVDTPEGKRKLSPVEWMLDCMFRPELAEQYPVFLVNR
EEVVRRLHLPDQKDKRKKYSYAQLAERWEEMTRAVREIRLLGETNLTEAQKEILSLARNFDVMRGWMLVSRIMLENPAAM
ERMEFPRWFPSAGRDGERLWTASPDKAAGAFLAMASLLERKAIGMAGAEASALRMKAEGLLLEKLAQPNEAASAGERHSL
EREIFYYRLDPLYVSLAVFVAAFVCLLLCALFRPAANAPLWRRFLRPGGFSLAWLTGAGGAGVLVAALVIRVLITMRSPV
GNTYETIAFIACMGVLCALVVELFSKKGIVLAAGLLLGAFSCQMGILYESSQAVDHMDPLVAILRSNFLLSTHVITIVLG
YAAGLLAAVLSHIYLLASPLRLIGGKTEQSLDRMAYGILCFSLVFTLVGTVFGGIWGNESWGRFWGWDPKENGALMIVLW
QLTVLHARKAGWLSSWLLHFSNVVGGVIIAFAWWGVNMLGVGLHSYGFTSGRDALDMFYWSEAVLCVLFIILHYRALRRV
DVR
>Mature_883_residues
MDRERTDAVWKKYGRSLWNFAGSYGLGIALMLILLVLTFAGTLHQVRLSSAMGSEAAIESFFGAAYVLIPLGGENSLISL
PLPGMGITCVLLFANLLIGGVFRIRWTWRHAGVLVAHGGILLLLAGIMLGNKMTVAVEQVELPQGDRVHEYSLPFDLRLN
RFVPEFYPGTSKPKSYESQITVFPESGGQYDAVIRMNEPLRLSGWTLYQMSWGQDSLHPGRLISILRASHNPLEQMPKWS
SYIIAVGLLWHFACVFGRYLRRKPGLASAGTAATDELQAVSAPGGKKRLRLAGICLLVAAIFGIGMLAARPDVHPVLVEH
YVPWSPFLVERAGAMAVQDGGRLKPVSTYAGFHLLRTLGKRSFVVDTPEGKRKLSPVEWMLDCMFRPELAEQYPVFLVNR
EEVVRRLHLPDQKDKRKKYSYAQLAERWEEMTRAVREIRLLGETNLTEAQKEILSLARNFDVMRGWMLVSRIMLENPAAM
ERMEFPRWFPSAGRDGERLWTASPDKAAGAFLAMASLLERKAIGMAGAEASALRMKAEGLLLEKLAQPNEAASAGERHSL
EREIFYYRLDPLYVSLAVFVAAFVCLLLCALFRPAANAPLWRRFLRPGGFSLAWLTGAGGAGVLVAALVIRVLITMRSPV
GNTYETIAFIACMGVLCALVVELFSKKGIVLAAGLLLGAFSCQMGILYESSQAVDHMDPLVAILRSNFLLSTHVITIVLG
YAAGLLAAVLSHIYLLASPLRLIGGKTEQSLDRMAYGILCFSLVFTLVGTVFGGIWGNESWGRFWGWDPKENGALMIVLW
QLTVLHARKAGWLSSWLLHFSNVVGGVIIAFAWWGVNMLGVGLHSYGFTSGRDALDMFYWSEAVLCVLFIILHYRALRRV
DVR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 97828; Mature: 97828

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRERTDAVWKKYGRSLWNFAGSYGLGIALMLILLVLTFAGTLHQVRLSSAMGSEAAIES
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FFGAAYVLIPLGGENSLISLPLPGMGITCVLLFANLLIGGVFRIRWTWRHAGVLVAHGGI
HCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCHHEEEEEEEECCEEEECCHH
LLLLAGIMLGNKMTVAVEQVELPQGDRVHEYSLPFDLRLNRFVPEFYPGTSKPKSYESQI
HHHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCCHHHCCCHHCCCCCCCCCCCCEE
TVFPESGGQYDAVIRMNEPLRLSGWTLYQMSWGQDSLHPGRLISILRASHNPLEQMPKWS
EEEECCCCCEEEEEEECCCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCCCHH
SYIIAVGLLWHFACVFGRYLRRKPGLASAGTAATDELQAVSAPGGKKRLRLAGICLLVAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
IFGIGMLAARPDVHPVLVEHYVPWSPFLVERAGAMAVQDGGRLKPVSTYAGFHLLRTLGK
HHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCC
RSFVVDTPEGKRKLSPVEWMLDCMFRPELAEQYPVFLVNREEVVRRLHLPDQKDKRKKYS
CCEEEECCCCCCCCCHHHHHHHHHCCCCHHCCCCEEEECHHHHHHHHCCCCCHHHHHHHH
YAQLAERWEEMTRAVREIRLLGETNLTEAQKEILSLARNFDVMRGWMLVSRIMLENPAAM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERMEFPRWFPSAGRDGERLWTASPDKAAGAFLAMASLLERKAIGMAGAEASALRMKAEGL
HHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLEKLAQPNEAASAGERHSLEREIFYYRLDPLYVSLAVFVAAFVCLLLCALFRPAANAPL
HHHHHCCCCHHHCCCHHHCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WRRFLRPGGFSLAWLTGAGGAGVLVAALVIRVLITMRSPVGNTYETIAFIACMGVLCALV
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VELFSKKGIVLAAGLLLGAFSCQMGILYESSQAVDHMDPLVAILRSNFLLSTHVITIVLG
HHHHCCCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YAAGLLAAVLSHIYLLASPLRLIGGKTEQSLDRMAYGILCFSLVFTLVGTVFGGIWGNES
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WGRFWGWDPKENGALMIVLWQLTVLHARKAGWLSSWLLHFSNVVGGVIIAFAWWGVNMLG
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLHSYGFTSGRDALDMFYWSEAVLCVLFIILHYRALRRVDVR
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRERTDAVWKKYGRSLWNFAGSYGLGIALMLILLVLTFAGTLHQVRLSSAMGSEAAIES
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FFGAAYVLIPLGGENSLISLPLPGMGITCVLLFANLLIGGVFRIRWTWRHAGVLVAHGGI
HCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCHHEEEEEEEECCEEEECCHH
LLLLAGIMLGNKMTVAVEQVELPQGDRVHEYSLPFDLRLNRFVPEFYPGTSKPKSYESQI
HHHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCCHHHCCCHHCCCCCCCCCCCCEE
TVFPESGGQYDAVIRMNEPLRLSGWTLYQMSWGQDSLHPGRLISILRASHNPLEQMPKWS
EEEECCCCCEEEEEEECCCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCCCHH
SYIIAVGLLWHFACVFGRYLRRKPGLASAGTAATDELQAVSAPGGKKRLRLAGICLLVAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
IFGIGMLAARPDVHPVLVEHYVPWSPFLVERAGAMAVQDGGRLKPVSTYAGFHLLRTLGK
HHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCC
RSFVVDTPEGKRKLSPVEWMLDCMFRPELAEQYPVFLVNREEVVRRLHLPDQKDKRKKYS
CCEEEECCCCCCCCCHHHHHHHHHCCCCHHCCCCEEEECHHHHHHHHCCCCCHHHHHHHH
YAQLAERWEEMTRAVREIRLLGETNLTEAQKEILSLARNFDVMRGWMLVSRIMLENPAAM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERMEFPRWFPSAGRDGERLWTASPDKAAGAFLAMASLLERKAIGMAGAEASALRMKAEGL
HHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLEKLAQPNEAASAGERHSLEREIFYYRLDPLYVSLAVFVAAFVCLLLCALFRPAANAPL
HHHHHCCCCHHHCCCHHHCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WRRFLRPGGFSLAWLTGAGGAGVLVAALVIRVLITMRSPVGNTYETIAFIACMGVLCALV
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VELFSKKGIVLAAGLLLGAFSCQMGILYESSQAVDHMDPLVAILRSNFLLSTHVITIVLG
HHHHCCCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YAAGLLAAVLSHIYLLASPLRLIGGKTEQSLDRMAYGILCFSLVFTLVGTVFGGIWGNES
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WGRFWGWDPKENGALMIVLWQLTVLHARKAGWLSSWLLHFSNVVGGVIIAFAWWGVNMLG
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLHSYGFTSGRDALDMFYWSEAVLCVLFIILHYRALRRVDVR
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA