| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735142
Identifier: 187735142
GI number: 187735142
Start: 748098
End: 749660
Strand: Reverse
Name: 187735142
Synonym: Amuc_0636
Alternate gene names: NA
Gene position: 749660-748098 (Counterclockwise)
Preceding gene: 187735149
Following gene: 187735138
Centisome position: 28.14
GC content: 47.86
Gene sequence:
>1563_bases ATGGAAGAATCCCGCGTAAAGAAAAGCCTGTTGAACGCCAGGGTCAATCTCATTTTTTATGTTTTGATTCTTCTCATTTC CTTTTTTTCAAGAAAGATATTCTTGAATTGCCTGGGTGCCGATTTTGTCGGTTTGACGGGAACATTAATGAGTCTGCTGA ATTTCCTCAATTTGGCGGAACTTGGTATAAGCACGGCTATCGGGTATGTGCTTTACAAGCCGATCTTTGAGCATGATGAG ACCAGGATTAATGAAATTATCTCCGTGCTGGGATACATGTACCGGTGGATAGGGCGGATAATCATTGCGGCTGGAGTAGC GCTTTCCTGTTTCCTGCCGGTTATTTTCCCTTCCACAGGTTTTTCCTATGGAATCATCTATTTTGCTTATTATTCCTTTC TGGCCTCTTCCCTGATCGGGTATTTTGCCAACTACAGGCAGACCCTTTTGGGAGCGGACCAGAGGAATTACGTAGTGGCG TTTTATTTCCAGACGGCATCCATCATCAAAATCATATGCCAGATGCTGTCTGCATGGTATACGGGAAGCTATTATTTATG GATAGGGATAGAGCTGTTCTTCGGCATTATTTATTCCTTCATCCTGAATTGGAAGATCAATCAGGTCTATCCCTGGCTGA AGAGCAATGTGGCCCTGGGAAAGGAGCTGTTCAAAAAATATCCTGAAGTCACTAAATACACCAAGCAGTTGTTTATGCAT CGGCTGGGAAGCTTTTTCCAGTTCCAGGTGACGCCGTTTCTGGTATATGCCTTTGTTTCCCTCCAGATGGCGGCCTACTT CGGCAACTATTCCACCATTGTGGAGAAACTGCACCTTCTGGTCAATAACCTGCTCGGCAGTACGGAAGCCAGTGTGGGCA ACTTGATTGCGGAGGGAAATGCGGGAAAAATCCGCAAGGTGTTCAGTGAATTGTTTTCCCTGCGCATGCTGATTGCCGGG ACGGTATGTTTCCCCCTTTACCAGCTTTTGGAGCCATTCATCACGCTTTGGCTGGGAGCGGGCTATATCCTTCCCCGGGA AATCATGCTGCTGCTCGTTATCAGGCTGTTCATCACCATTACGCGGGGGGTTGTGGATCAGTTTTTATACGGTTACGGTT TGTTCTGGGATGTATGGGCTCCTCTTGCGGAAAGCGTGATCAACATTTCCGTGGCGATCATCGGAGGTTATTTATGGGGA TTGCCCGGCGTTTTGCTGGGGGGCATCTCCAGCCTGATACTTATTGTGGGCATATGGAAGCCTTTCATGCTGTATAACTG GGGATTCAGGAAAAATGTGATGAACTACTGGTTCCAATTCGGTTACCAGCTGGCGCTGATTTTGATTTCGGCCGTGTTCA TGGGCTGGATCTGGAAATTTGTTCCTCTGCAGCCTTCCGCGTCTTTCTTTTCCTGGTTTTTATGCGCCTTCCTCATGGCC GCTTCTTATGGAGGTGTGACGGTTCTTTTAATGTATTGCGGTACGCAGGGCATGCGCGGAATGGTGCGCCGTGCGCTGGA GATGGCGGGAACCCGGTTGCCGTGGCGGAAAAAAACTGAATAG
Upstream 100 bases:
>100_bases GCCGTTGGTATATTGCCGGTTGAATAAATAATCCGGTTATTAATAAAACAGATATTTTTAACTTCTCCCGGGAAAGGATA AGGTTGATGGAATAAATAAC
Downstream 100 bases:
>100_bases GGACGCAGAGGTGTTGCTGGGTATCGGGAATGGGGAGGCTGCGTCATTCATGCTCAATCTTCGGTAATTGTTTCGGCTTC CGGGTCAACAAAATCCTCCA
Product: flippase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MEESRVKKSLLNARVNLIFYVLILLISFFSRKIFLNCLGADFVGLTGTLMSLLNFLNLAELGISTAIGYVLYKPIFEHDE TRINEIISVLGYMYRWIGRIIIAAGVALSCFLPVIFPSTGFSYGIIYFAYYSFLASSLIGYFANYRQTLLGADQRNYVVA FYFQTASIIKIICQMLSAWYTGSYYLWIGIELFFGIIYSFILNWKINQVYPWLKSNVALGKELFKKYPEVTKYTKQLFMH RLGSFFQFQVTPFLVYAFVSLQMAAYFGNYSTIVEKLHLLVNNLLGSTEASVGNLIAEGNAGKIRKVFSELFSLRMLIAG TVCFPLYQLLEPFITLWLGAGYILPREIMLLLVIRLFITITRGVVDQFLYGYGLFWDVWAPLAESVINISVAIIGGYLWG LPGVLLGGISSLILIVGIWKPFMLYNWGFRKNVMNYWFQFGYQLALILISAVFMGWIWKFVPLQPSASFFSWFLCAFLMA ASYGGVTVLLMYCGTQGMRGMVRRALEMAGTRLPWRKKTE
Sequences:
>Translated_520_residues MEESRVKKSLLNARVNLIFYVLILLISFFSRKIFLNCLGADFVGLTGTLMSLLNFLNLAELGISTAIGYVLYKPIFEHDE TRINEIISVLGYMYRWIGRIIIAAGVALSCFLPVIFPSTGFSYGIIYFAYYSFLASSLIGYFANYRQTLLGADQRNYVVA FYFQTASIIKIICQMLSAWYTGSYYLWIGIELFFGIIYSFILNWKINQVYPWLKSNVALGKELFKKYPEVTKYTKQLFMH RLGSFFQFQVTPFLVYAFVSLQMAAYFGNYSTIVEKLHLLVNNLLGSTEASVGNLIAEGNAGKIRKVFSELFSLRMLIAG TVCFPLYQLLEPFITLWLGAGYILPREIMLLLVIRLFITITRGVVDQFLYGYGLFWDVWAPLAESVINISVAIIGGYLWG LPGVLLGGISSLILIVGIWKPFMLYNWGFRKNVMNYWFQFGYQLALILISAVFMGWIWKFVPLQPSASFFSWFLCAFLMA ASYGGVTVLLMYCGTQGMRGMVRRALEMAGTRLPWRKKTE >Mature_520_residues MEESRVKKSLLNARVNLIFYVLILLISFFSRKIFLNCLGADFVGLTGTLMSLLNFLNLAELGISTAIGYVLYKPIFEHDE TRINEIISVLGYMYRWIGRIIIAAGVALSCFLPVIFPSTGFSYGIIYFAYYSFLASSLIGYFANYRQTLLGADQRNYVVA FYFQTASIIKIICQMLSAWYTGSYYLWIGIELFFGIIYSFILNWKINQVYPWLKSNVALGKELFKKYPEVTKYTKQLFMH RLGSFFQFQVTPFLVYAFVSLQMAAYFGNYSTIVEKLHLLVNNLLGSTEASVGNLIAEGNAGKIRKVFSELFSLRMLIAG TVCFPLYQLLEPFITLWLGAGYILPREIMLLLVIRLFITITRGVVDQFLYGYGLFWDVWAPLAESVINISVAIIGGYLWG LPGVLLGGISSLILIVGIWKPFMLYNWGFRKNVMNYWFQFGYQLALILISAVFMGWIWKFVPLQPSASFFSWFLCAFLMA ASYGGVTVLLMYCGTQGMRGMVRRALEMAGTRLPWRKKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59374; Mature: 59374
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESRVKKSLLNARVNLIFYVLILLISFFSRKIFLNCLGADFVGLTGTLMSLLNFLNLAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGISTAIGYVLYKPIFEHDETRINEIISVLGYMYRWIGRIIIAAGVALSCFLPVIFPSTG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FSYGIIYFAYYSFLASSLIGYFANYRQTLLGADQRNYVVAFYFQTASIIKIICQMLSAWY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH TGSYYLWIGIELFFGIIYSFILNWKINQVYPWLKSNVALGKELFKKYPEVTKYTKQLFMH CCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RLGSFFQFQVTPFLVYAFVSLQMAAYFGNYSTIVEKLHLLVNNLLGSTEASVGNLIAEGN HHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC AGKIRKVFSELFSLRMLIAGTVCFPLYQLLEPFITLWLGAGYILPREIMLLLVIRLFITI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TRGVVDQFLYGYGLFWDVWAPLAESVINISVAIIGGYLWGLPGVLLGGISSLILIVGIWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFMLYNWGFRKNVMNYWFQFGYQLALILISAVFMGWIWKFVPLQPSASFFSWFLCAFLMA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASYGGVTVLLMYCGTQGMRGMVRRALEMAGTRLPWRKKTE HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEESRVKKSLLNARVNLIFYVLILLISFFSRKIFLNCLGADFVGLTGTLMSLLNFLNLAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGISTAIGYVLYKPIFEHDETRINEIISVLGYMYRWIGRIIIAAGVALSCFLPVIFPSTG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FSYGIIYFAYYSFLASSLIGYFANYRQTLLGADQRNYVVAFYFQTASIIKIICQMLSAWY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH TGSYYLWIGIELFFGIIYSFILNWKINQVYPWLKSNVALGKELFKKYPEVTKYTKQLFMH CCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RLGSFFQFQVTPFLVYAFVSLQMAAYFGNYSTIVEKLHLLVNNLLGSTEASVGNLIAEGN HHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC AGKIRKVFSELFSLRMLIAGTVCFPLYQLLEPFITLWLGAGYILPREIMLLLVIRLFITI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TRGVVDQFLYGYGLFWDVWAPLAESVINISVAIIGGYLWGLPGVLLGGISSLILIVGIWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFMLYNWGFRKNVMNYWFQFGYQLALILISAVFMGWIWKFVPLQPSASFFSWFLCAFLMA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASYGGVTVLLMYCGTQGMRGMVRRALEMAGTRLPWRKKTE HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA