| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is epsE [H]
Identifier: 187735138
GI number: 187735138
Start: 742967
End: 744031
Strand: Reverse
Name: epsE [H]
Synonym: Amuc_0632
Alternate gene names: 187735138
Gene position: 744031-742967 (Counterclockwise)
Preceding gene: 187735142
Following gene: 187735131
Centisome position: 27.93
GC content: 55.12
Gene sequence:
>1065_bases ATGAACCCTTCGGAACTCCCTTCCATCAGCATTATCCTGACCGGGCATAATGAGGAGAGCAGCATCAGGGATGCTATCCG GAGCGTATTCGGGCAGGATTATGAAGGGCCGGTGGAAATCATCCTTTCGGACGACGGCTCTTCCGACGGAACCTTCTCCG TCATGCAGGAAATGGCGGCTCAATACAGGGGGCCGTACCGGGTAATCTTAAACCGGAATGAAACGCCGCTGGGGCGCGGG CCTCATATCCGGCAGGCGGTTGGTCTGGCTTCCCATGAATGGATTCTCCGTCAGGATGGGGACGATTGTTCCTTCCCCTG GAGATGCAGGCTTTTTGCCTGGGCAGTGATGGAACGCCCGGATGCCGTGGCTGTGGTCAGCCAGATGACCAGCGTCTATG AGGAACCGGGCATTGCGTTTGAATTCCCGGCCTTTCCTGCTGCTCCGCGGGAAAGGCCGGCTGTTGTGCTTCAGGCGGGA GCTTTTTCTTCTTCCGCCCATTACGGAGGAAGCATGATGATCAGGAAGAGCGCCTGCGAATGGGGTAGCTCCCTGCGGAT GACGGCCAGTTTTGAAGACGACTTGATGGGGTTCCACGCATGGCTTCAGGGCAACATTTATGAAATGCCGGGCATATCCT TATATTATTACCGGTTTGCGCTTAAAAATATTTGCGCTGTCAACAGCGCGTTCCGGTTTGCCGACATGCGGGCGGCGGCG GCCTTTGAAAAAAGGGAGCTGGAAATGAAAAGCCAGTTGAAAAAAAGCAAGGAGGCGGGGTTGGAACTGTGCGGGGAATT GCTGGAGGGCCTTGCTCCGGTTTTTCGCTCGCGGGAAGAACTGCTTGCCGAAATGGAGGAGAGGAGAAAAATCATAGACA GCATTGACCGGCAGCAGAATTGGTGGAGTTATCCCTTTCGGCGGAGATGGGCGTTGAGGCGGCCGGGATGGATGGGTATC GTCCACTGCCTGCCGCAAAAGCTGTATTTATTCTGCATGGTTTTCTTTTTCAAGCTCAGGAAAGTGAAACGGGCCGTTTG CGGTGCCCGGCAGGATTTGGAATAA
Upstream 100 bases:
>100_bases CCGGATTTGGAATCCGGTATGAACGTGATGCCTTATTAATAAACAGAAAAGGACATGGTCCTCTTCATGTTTGACGCTTT CTTTTCCGTGCTTTTTCTTC
Downstream 100 bases:
>100_bases GGGTAAGGAAACGCTTGAAGAAGGAGGGGAACTTTTGCTCGGACGGGTTCTCCCCGGTTCGGTGTTGTTTTTGATGGAGA GGGGGGCGGAAGATGGCTTC
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNPSELPSISIILTGHNEESSIRDAIRSVFGQDYEGPVEIILSDDGSSDGTFSVMQEMAAQYRGPYRVILNRNETPLGRG PHIRQAVGLASHEWILRQDGDDCSFPWRCRLFAWAVMERPDAVAVVSQMTSVYEEPGIAFEFPAFPAAPRERPAVVLQAG AFSSSAHYGGSMMIRKSACEWGSSLRMTASFEDDLMGFHAWLQGNIYEMPGISLYYYRFALKNICAVNSAFRFADMRAAA AFEKRELEMKSQLKKSKEAGLELCGELLEGLAPVFRSREELLAEMEERRKIIDSIDRQQNWWSYPFRRRWALRRPGWMGI VHCLPQKLYLFCMVFFFKLRKVKRAVCGARQDLE
Sequences:
>Translated_354_residues MNPSELPSISIILTGHNEESSIRDAIRSVFGQDYEGPVEIILSDDGSSDGTFSVMQEMAAQYRGPYRVILNRNETPLGRG PHIRQAVGLASHEWILRQDGDDCSFPWRCRLFAWAVMERPDAVAVVSQMTSVYEEPGIAFEFPAFPAAPRERPAVVLQAG AFSSSAHYGGSMMIRKSACEWGSSLRMTASFEDDLMGFHAWLQGNIYEMPGISLYYYRFALKNICAVNSAFRFADMRAAA AFEKRELEMKSQLKKSKEAGLELCGELLEGLAPVFRSREELLAEMEERRKIIDSIDRQQNWWSYPFRRRWALRRPGWMGI VHCLPQKLYLFCMVFFFKLRKVKRAVCGARQDLE >Mature_354_residues MNPSELPSISIILTGHNEESSIRDAIRSVFGQDYEGPVEIILSDDGSSDGTFSVMQEMAAQYRGPYRVILNRNETPLGRG PHIRQAVGLASHEWILRQDGDDCSFPWRCRLFAWAVMERPDAVAVVSQMTSVYEEPGIAFEFPAFPAAPRERPAVVLQAG AFSSSAHYGGSMMIRKSACEWGSSLRMTASFEDDLMGFHAWLQGNIYEMPGISLYYYRFALKNICAVNSAFRFADMRAAA AFEKRELEMKSQLKKSKEAGLELCGELLEGLAPVFRSREELLAEMEERRKIIDSIDRQQNWWSYPFRRRWALRRPGWMGI VHCLPQKLYLFCMVFFFKLRKVKRAVCGARQDLE
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 40415; Mature: 40415
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSELPSISIILTGHNEESSIRDAIRSVFGQDYEGPVEIILSDDGSSDGTFSVMQEMAA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHH QYRGPYRVILNRNETPLGRGPHIRQAVGLASHEWILRQDGDDCSFPWRCRLFAWAVMERP HHCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCC DAVAVVSQMTSVYEEPGIAFEFPAFPAAPRERPAVVLQAGAFSSSAHYGGSMMIRKSACE CHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHH WGSSLRMTASFEDDLMGFHAWLQGNIYEMPGISLYYYRFALKNICAVNSAFRFADMRAAA CCCCEEEEECCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFEKRELEMKSQLKKSKEAGLELCGELLEGLAPVFRSREELLAEMEERRKIIDSIDRQQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC WWSYPFRRRWALRRPGWMGIVHCLPQKLYLFCMVFFFKLRKVKRAVCGARQDLE CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure MNPSELPSISIILTGHNEESSIRDAIRSVFGQDYEGPVEIILSDDGSSDGTFSVMQEMAA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHH QYRGPYRVILNRNETPLGRGPHIRQAVGLASHEWILRQDGDDCSFPWRCRLFAWAVMERP HHCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCC DAVAVVSQMTSVYEEPGIAFEFPAFPAAPRERPAVVLQAGAFSSSAHYGGSMMIRKSACE CHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHH WGSSLRMTASFEDDLMGFHAWLQGNIYEMPGISLYYYRFALKNICAVNSAFRFADMRAAA CCCCEEEEECCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFEKRELEMKSQLKKSKEAGLELCGELLEGLAPVFRSREELLAEMEERRKIIDSIDRQQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC WWSYPFRRRWALRRPGWMGIVHCLPQKLYLFCMVFFFKLRKVKRAVCGARQDLE CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]