| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735128
Identifier: 187735128
GI number: 187735128
Start: 730593
End: 731306
Strand: Direct
Name: 187735128
Synonym: Amuc_0622
Alternate gene names: NA
Gene position: 730593-731306 (Clockwise)
Preceding gene: 187735126
Following gene: 187735129
Centisome position: 27.42
GC content: 51.26
Gene sequence:
>714_bases ATGGCTATTCATTATTCACTTACCGCCATCATTCTGACCGGAAGCATGGCTTCCACGGGAATCGCGGCTACTACATGGAC AAGCGCCACCCCCGATCTCTCCCCCACATCCCAGTACCTGTGCACCGGATGGTCTTTCTGCCTGGGAGAAGCAGGGTCAA GGCTTATCACGACCAGCACGCCGCATTCCCAGCCAATGGATGCAGAAGTACGTCTAACGTCCATTGATTTCAATTTGAGA GAGGCCAGAAAGAACGGAACAGGCCTGCTCATCGTGCAACATTCAGGCGGTATCCAAACCATTATCGGCAAATCGGACAA TACCATTTCTACTGGAAACTATGTTTCCGGAACATGGACTTTTACCAACGGGCCAATTTTAAACACAGGCACTACTTATT ACGCCATGTTTACTGAAACGGATCTGTCCGCCATCAGCATAGGAGACTGCTGGGACAACGATTTCTTCTCCATCAACGGT TCCCGGCGTATCGACAATTCCATGGATAACGCAGCCGGAACGGGGCCGTCTGTCAACCAGCTCGCTTTAGTCGGCTCCAA TTGGCAAAAGGACTTTATTGCCCGTAACGATAACATGGTTCCCACAGGTCTTCAAATCCATACACAGGCCGTACCGGAAC CGGCAAGCGCATTGCTGCTTACGTTTGGCATGGCGCTTCTGCCCTTCAGACGCCGCAAATCTCCCACACTTTAA
Upstream 100 bases:
>100_bases AGTCACATACCTGTTCTTTTTAATTAAAAAACGGTCTTATTTCAAGCCTTCTCGAATATCCTTGAGCCGGAAGCCTCCGC CCTGTGATATTGGTTCCGTT
Downstream 100 bases:
>100_bases TTACAACATCCATTTCCCATGAATCTGCACCTATCATCCCTGGCAGCGTTGCTCCTGGCATCATACCTTCCGGCGCAGGC CACCGTACCGGCCCATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAIHYSLTAIILTGSMASTGIAATTWTSATPDLSPTSQYLCTGWSFCLGEAGSRLITTSTPHSQPMDAEVRLTSIDFNLR EARKNGTGLLIVQHSGGIQTIIGKSDNTISTGNYVSGTWTFTNGPILNTGTTYYAMFTETDLSAISIGDCWDNDFFSING SRRIDNSMDNAAGTGPSVNQLALVGSNWQKDFIARNDNMVPTGLQIHTQAVPEPASALLLTFGMALLPFRRRKSPTL
Sequences:
>Translated_237_residues MAIHYSLTAIILTGSMASTGIAATTWTSATPDLSPTSQYLCTGWSFCLGEAGSRLITTSTPHSQPMDAEVRLTSIDFNLR EARKNGTGLLIVQHSGGIQTIIGKSDNTISTGNYVSGTWTFTNGPILNTGTTYYAMFTETDLSAISIGDCWDNDFFSING SRRIDNSMDNAAGTGPSVNQLALVGSNWQKDFIARNDNMVPTGLQIHTQAVPEPASALLLTFGMALLPFRRRKSPTL >Mature_236_residues AIHYSLTAIILTGSMASTGIAATTWTSATPDLSPTSQYLCTGWSFCLGEAGSRLITTSTPHSQPMDAEVRLTSIDFNLRE ARKNGTGLLIVQHSGGIQTIIGKSDNTISTGNYVSGTWTFTNGPILNTGTTYYAMFTETDLSAISIGDCWDNDFFSINGS RRIDNSMDNAAGTGPSVNQLALVGSNWQKDFIARNDNMVPTGLQIHTQAVPEPASALLLTFGMALLPFRRRKSPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25437; Mature: 25306
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHYSLTAIILTGSMASTGIAATTWTSATPDLSPTSQYLCTGWSFCLGEAGSRLITTST CEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHCCCCEEEEECC PHSQPMDAEVRLTSIDFNLREARKNGTGLLIVQHSGGIQTIIGKSDNTISTGNYVSGTWT CCCCCCCCEEEEEEECCCHHHHCCCCCEEEEEECCCCEEEEECCCCCEEECCCEEEEEEE FTNGPILNTGTTYYAMFTETDLSAISIGDCWDNDFFSINGSRRIDNSMDNAAGTGPSVNQ ECCCCEEECCCEEEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE LALVGSNWQKDFIARNDNMVPTGLQIHTQAVPEPASALLLTFGMALLPFRRRKSPTL EEEECCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCCCCCC >Mature Secondary Structure AIHYSLTAIILTGSMASTGIAATTWTSATPDLSPTSQYLCTGWSFCLGEAGSRLITTST EEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHCCCCEEEEECC PHSQPMDAEVRLTSIDFNLREARKNGTGLLIVQHSGGIQTIIGKSDNTISTGNYVSGTWT CCCCCCCCEEEEEEECCCHHHHCCCCCEEEEEECCCCEEEEECCCCCEEECCCEEEEEEE FTNGPILNTGTTYYAMFTETDLSAISIGDCWDNDFFSINGSRRIDNSMDNAAGTGPSVNQ ECCCCEEECCCEEEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE LALVGSNWQKDFIARNDNMVPTGLQIHTQAVPEPASALLLTFGMALLPFRRRKSPTL EEEECCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA