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The map label for this gene is pimF [H]

Identifier: 187735006

GI number: 187735006

Start: 589661

End: 590599

Strand: Reverse

Name: pimF [H]

Synonym: Amuc_0499

Alternate gene names: 187735006

Gene position: 590599-589661 (Counterclockwise)

Preceding gene: 187735007

Following gene: 187735005

Centisome position: 22.17

GC content: 56.02

Gene sequence:

>939_bases
ATGACTGATCCACAGGTTCAATTGTCCATTGTGGCTACCGTGTATTGTACGGGCGGTTATCTGGCGGAGTTCTGTTCCCG
CAGTTTCGCCGCTGCGCTTGAGGCGGGTTATGACCCCTCCTGCACGGAGGTGGTGCTGGTGAATGACGGCTGCCCAAGGG
ACGGTCTGGAACAGGCGTTGAAGGAGCGGGAGAAGGACGGCCGGGTGCGCGTGGTGGACTTATCCCGCAACTTCGGCCAT
CATCTGGCCATGTACGTGGCCTGCGAAGAAGCCCGGGGAGAGCGCGTATTCTTGATTGACAGTGATTTGGAGGAATCTCC
CGAGTGGCTGGTTAATTTTTCCCGTGAGATGGATTCTACCGGGGCGGATGTGGTGTACGGGGTGCAGGAGAAGAGGAAGG
GCGGCTTGTTTGAAGCCGTTTCCGGAGAATTGTTCTACACATTGTTTAATTTGCTTTCCGATCAGCAGATTACCAGGAAT
ATGGTTACGGCGCGGCTGATGAGCGCGCGTTTTCTGCGGGAGATGCTGAAATTCCAGGACCGGGAGCCTTTTTTCTTTGG
GCTGTGCGTTTCCGCCGGTTTCCGGCAGGTGCCGTGCAGGGTGAAGAAAGCATCCTCTTCTCCAACGACCTACACTTTCC
GCAAAAAAATGGCGCTGGCGGTGAATTCCGTGGTTTCCTACAGCGCCAGGCCGTTGGTGTATATTTCATACTTTGGCCTG
GCGGTCACCCTAGTAGCCATGCTGTATGTCGCCTGGGTGGTTGTGCGCCAGCTTCTGTATAATGTAGCCCCTCCCGGCTG
GGCCTCTTCCGTGGCCTCCATCTGGCTGGTCGGAGGCTTGATTCTGATGAGCCTGGGCGTTATCGGCATTTACATTTCCA
AGATTTATAAGGAAACCAAGCACAGGCCCGCCGTGGTGGTAGCGCGCCGGTATGAGTGA

Upstream 100 bases:

>100_bases
GTTTTCATGAGCGCATGGGTTTTGCCCGTGTTCCGGAAAAGGACGAGGTGTGCGAGAAAAGCGGGGAAAGGAAGCGCGTT
CTCATGTATGTAAAAGCGTT

Downstream 100 bases:

>100_bases
ATTGTTCCCGTCTCTTTTTTTCTTTCATGATCAACTATCTGATTCTGCACCTGCTGTTTATCGTTTACGCGCTGAATACC
GTGCTGGGGCGCATGGCTGC

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTDPQVQLSIVATVYCTGGYLAEFCSRSFAAALEAGYDPSCTEVVLVNDGCPRDGLEQALKEREKDGRVRVVDLSRNFGH
HLAMYVACEEARGERVFLIDSDLEESPEWLVNFSREMDSTGADVVYGVQEKRKGGLFEAVSGELFYTLFNLLSDQQITRN
MVTARLMSARFLREMLKFQDREPFFFGLCVSAGFRQVPCRVKKASSSPTTYTFRKKMALAVNSVVSYSARPLVYISYFGL
AVTLVAMLYVAWVVVRQLLYNVAPPGWASSVASIWLVGGLILMSLGVIGIYISKIYKETKHRPAVVVARRYE

Sequences:

>Translated_312_residues
MTDPQVQLSIVATVYCTGGYLAEFCSRSFAAALEAGYDPSCTEVVLVNDGCPRDGLEQALKEREKDGRVRVVDLSRNFGH
HLAMYVACEEARGERVFLIDSDLEESPEWLVNFSREMDSTGADVVYGVQEKRKGGLFEAVSGELFYTLFNLLSDQQITRN
MVTARLMSARFLREMLKFQDREPFFFGLCVSAGFRQVPCRVKKASSSPTTYTFRKKMALAVNSVVSYSARPLVYISYFGL
AVTLVAMLYVAWVVVRQLLYNVAPPGWASSVASIWLVGGLILMSLGVIGIYISKIYKETKHRPAVVVARRYE
>Mature_311_residues
TDPQVQLSIVATVYCTGGYLAEFCSRSFAAALEAGYDPSCTEVVLVNDGCPRDGLEQALKEREKDGRVRVVDLSRNFGHH
LAMYVACEEARGERVFLIDSDLEESPEWLVNFSREMDSTGADVVYGVQEKRKGGLFEAVSGELFYTLFNLLSDQQITRNM
VTARLMSARFLREMLKFQDREPFFFGLCVSAGFRQVPCRVKKASSSPTTYTFRKKMALAVNSVVSYSARPLVYISYFGLA
VTLVAMLYVAWVVVRQLLYNVAPPGWASSVASIWLVGGLILMSLGVIGIYISKIYKETKHRPAVVVARRYE

Specific function: May play only a redundant role in maintaining cell wall viability and bacterial virulence [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=271, Percent_Identity=29.520295202952, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=21.4285714285714, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 34910; Mature: 34779

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPQVQLSIVATVYCTGGYLAEFCSRSFAAALEAGYDPSCTEVVLVNDGCPRDGLEQAL
CCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
KEREKDGRVRVVDLSRNFGHHLAMYVACEEARGERVFLIDSDLEESPEWLVNFSREMDST
HHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
GADVVYGVQEKRKGGLFEAVSGELFYTLFNLLSDQQITRNMVTARLMSARFLREMLKFQD
CCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
REPFFFGLCVSAGFRQVPCRVKKASSSPTTYTFRKKMALAVNSVVSYSARPLVYISYFGL
CCCEEEEHHHHCCCHHCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
AVTLVAMLYVAWVVVRQLLYNVAPPGWASSVASIWLVGGLILMSLGVIGIYISKIYKETK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HRPAVVVARRYE
CCCEEEEEECCC
>Mature Secondary Structure 
TDPQVQLSIVATVYCTGGYLAEFCSRSFAAALEAGYDPSCTEVVLVNDGCPRDGLEQAL
CCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
KEREKDGRVRVVDLSRNFGHHLAMYVACEEARGERVFLIDSDLEESPEWLVNFSREMDST
HHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
GADVVYGVQEKRKGGLFEAVSGELFYTLFNLLSDQQITRNMVTARLMSARFLREMLKFQD
CCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
REPFFFGLCVSAGFRQVPCRVKKASSSPTTYTFRKKMALAVNSVVSYSARPLVYISYFGL
CCCEEEEHHHHCCCHHCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
AVTLVAMLYVAWVVVRQLLYNVAPPGWASSVASIWLVGGLILMSLGVIGIYISKIYKETK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HRPAVVVARRYE
CCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]