| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735003
Identifier: 187735003
GI number: 187735003
Start: 587034
End: 588830
Strand: Reverse
Name: 187735003
Synonym: Amuc_0496
Alternate gene names: NA
Gene position: 588830-587034 (Counterclockwise)
Preceding gene: 187735004
Following gene: 187734997
Centisome position: 22.1
GC content: 58.04
Gene sequence:
>1797_bases ATGTTGAAACAGATTTGGAGATGGGTATCGCTTTTTCCTCTGCTCCATCCCGTATGGTTCAACCTGTTGCTTCTGGTTCT GGCCTGGAGCCTTGTGGGCGTGGCGTACCAGTCCAATGACGATCTGGTGATTGCGTCCGTGCTTGACGGATGGGGGGATC CCTCTTATGCGGATGCCCATGTCATTTTCGTCAATCCCCTGTTGACCGGGCTTCTGTTGAAAGCTGCGCCTGTCCTTGGC GGGGTGTCCGTCTGGCCTGTGTTTCTGGCGCTTGCCACGTTGTCCAGCGGCGCGGCCATTTTCACGATGCTGACGGCGCA TGCCCGCAAGGCGCGCAGATATGATTTCAATACGCTGGTTCTGCTGCTGGTGTGGCTTCTGATCATGCCGGGCTTTTACG CCGCTCTGCAATTCAGCCATGCCGCCTTTCTGACGGGATTTACAGGTGTGCTGGCGTGTTTGAAGTACGGCTCTTCCTGG AGGGGGTGGTGCGCGGGAGTATTCCTGTGCGTGCTGGGCAGCATGGTCCGGCTGGATGCCGCCCTGGTGTGCGATGCTTT CTGGGGGGCCATCCTGCTGGCAGGCAGCCTGGAAGGGCTCAGGCCGTCCAGGGAAAAGCTGTTTGCCCTCAGTCGTCTCT GGCTGGCTCTGGCCTGTGTGCTCATTGCGTCCTTCAGCCTGAATGAATATAATAAATACGCCCACCGGAATGTGCTGGAG GGATGTGACGTGGCGGCATGGAACCAGGCCCGCGCCCTTCTCTCGGACACGTGTCCCATCAGGCAGGAGAGCGCCTACCA GTGTGAAAAGTACGGCGTGTTCTCCAACGATATCAGGATGGTCCGGATGTTTACCAATTGCGATATGGATGTATTCAATA CGGATTATCTGGAAAGGCTTCTGTTGGCGCGGGACGGAGGTGAATTCTGGCCCAGGGCGTGGGCCCGTGGAGAGAAAGCC TTGCATCTGTTTTCATGGGATTCCGTTATGGATCTTCTCCCCTGCTGGATTTTGTTCGGTCTGGCATGCCGCGTTTCTTT CCGGCGCGGGGATTCTCCGGCCCTGGTGTGCTGCGTAGGCTCCCTGCTGGTGCTGATTCTGCTGTATATGGCCAGCATAG ACCGCCTGTATTTCCGCGTAGTTTATCCAACGTTCCTGATTGCAGGGCTGTGTCTGCTGTGGTCGGATAAATATCGTCCC ATCCGCATCACCTGGACGGGGAAGGGAGCTCTTGCGGGCGGCGTGCCCATGTTCTGCGCGTTCTCCGTTTCTTTGTCCCA GGCGTGCGCCGCCGTGTGGGAGGCTAATCTGGAATCTTTTTCCCCGGATGCCGGGCGCCTGTTATGCGAGCGGGTGGACC GGGAGCCCGATTCCCTGTTTTGCGTCCAGATGTCCGGCGGCACTATTGACGATCTGGCCCCGGGGCAGTCTGTTTTCCGC AAGGCCTGGAGCTGTTCCCGGAAGAACGTTGTCACGCTGGGCGGCTGGAATTTTCCGTTGAAACCCGTACAGCGGAAACT GAAGGAGATGGGGTGGGAGGGGCAGTCCTCCCTGAACCTGTGCAGGGATAATGTGTACATTGTCTGTCTCACTCCGCAAG GTGACGTTTCCGATATGGACAGCAAGTTCATGGGGATGCTCAGCCGCCATATCTGGGAGCAGCACGGCGTTCGCACAGCC TGGCATCTGGATGAGAATATCCAGGGCGTGCGCGTTTACCGCCTGCGCAAGACATGGTTCCAACCCGGGAGGAAGGAAGC TGCCTCCGTCAGGGAAATGCGGCTCTCCGCAATGTAA
Upstream 100 bases:
>100_bases CGGTTTGTTCATCCGGATCGGCTCTTGACTTTCATTTTCCCCGTTCCTAGTATGCGTCCCCGGACAGGGAAAACAGTCTG TAAAGTCAGGAAATTTGCTT
Downstream 100 bases:
>100_bases AATCCCCCGGTGCGCGTTACGCAACGGGGGATGAGAAAGGAGGGAGGCTGGGGCTTGGCGACGATTGTTAAAAGCGAGGA CCGCCCGGCATGCGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MLKQIWRWVSLFPLLHPVWFNLLLLVLAWSLVGVAYQSNDDLVIASVLDGWGDPSYADAHVIFVNPLLTGLLLKAAPVLG GVSVWPVFLALATLSSGAAIFTMLTAHARKARRYDFNTLVLLLVWLLIMPGFYAALQFSHAAFLTGFTGVLACLKYGSSW RGWCAGVFLCVLGSMVRLDAALVCDAFWGAILLAGSLEGLRPSREKLFALSRLWLALACVLIASFSLNEYNKYAHRNVLE GCDVAAWNQARALLSDTCPIRQESAYQCEKYGVFSNDIRMVRMFTNCDMDVFNTDYLERLLLARDGGEFWPRAWARGEKA LHLFSWDSVMDLLPCWILFGLACRVSFRRGDSPALVCCVGSLLVLILLYMASIDRLYFRVVYPTFLIAGLCLLWSDKYRP IRITWTGKGALAGGVPMFCAFSVSLSQACAAVWEANLESFSPDAGRLLCERVDREPDSLFCVQMSGGTIDDLAPGQSVFR KAWSCSRKNVVTLGGWNFPLKPVQRKLKEMGWEGQSSLNLCRDNVYIVCLTPQGDVSDMDSKFMGMLSRHIWEQHGVRTA WHLDENIQGVRVYRLRKTWFQPGRKEAASVREMRLSAM
Sequences:
>Translated_598_residues MLKQIWRWVSLFPLLHPVWFNLLLLVLAWSLVGVAYQSNDDLVIASVLDGWGDPSYADAHVIFVNPLLTGLLLKAAPVLG GVSVWPVFLALATLSSGAAIFTMLTAHARKARRYDFNTLVLLLVWLLIMPGFYAALQFSHAAFLTGFTGVLACLKYGSSW RGWCAGVFLCVLGSMVRLDAALVCDAFWGAILLAGSLEGLRPSREKLFALSRLWLALACVLIASFSLNEYNKYAHRNVLE GCDVAAWNQARALLSDTCPIRQESAYQCEKYGVFSNDIRMVRMFTNCDMDVFNTDYLERLLLARDGGEFWPRAWARGEKA LHLFSWDSVMDLLPCWILFGLACRVSFRRGDSPALVCCVGSLLVLILLYMASIDRLYFRVVYPTFLIAGLCLLWSDKYRP IRITWTGKGALAGGVPMFCAFSVSLSQACAAVWEANLESFSPDAGRLLCERVDREPDSLFCVQMSGGTIDDLAPGQSVFR KAWSCSRKNVVTLGGWNFPLKPVQRKLKEMGWEGQSSLNLCRDNVYIVCLTPQGDVSDMDSKFMGMLSRHIWEQHGVRTA WHLDENIQGVRVYRLRKTWFQPGRKEAASVREMRLSAM >Mature_598_residues MLKQIWRWVSLFPLLHPVWFNLLLLVLAWSLVGVAYQSNDDLVIASVLDGWGDPSYADAHVIFVNPLLTGLLLKAAPVLG GVSVWPVFLALATLSSGAAIFTMLTAHARKARRYDFNTLVLLLVWLLIMPGFYAALQFSHAAFLTGFTGVLACLKYGSSW RGWCAGVFLCVLGSMVRLDAALVCDAFWGAILLAGSLEGLRPSREKLFALSRLWLALACVLIASFSLNEYNKYAHRNVLE GCDVAAWNQARALLSDTCPIRQESAYQCEKYGVFSNDIRMVRMFTNCDMDVFNTDYLERLLLARDGGEFWPRAWARGEKA LHLFSWDSVMDLLPCWILFGLACRVSFRRGDSPALVCCVGSLLVLILLYMASIDRLYFRVVYPTFLIAGLCLLWSDKYRP IRITWTGKGALAGGVPMFCAFSVSLSQACAAVWEANLESFSPDAGRLLCERVDREPDSLFCVQMSGGTIDDLAPGQSVFR KAWSCSRKNVVTLGGWNFPLKPVQRKLKEMGWEGQSSLNLCRDNVYIVCLTPQGDVSDMDSKFMGMLSRHIWEQHGVRTA WHLDENIQGVRVYRLRKTWFQPGRKEAASVREMRLSAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67058; Mature: 67058
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQIWRWVSLFPLLHPVWFNLLLLVLAWSLVGVAYQSNDDLVIASVLDGWGDPSYADAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHCCCCCCCCCCEE VIFVNPLLTGLLLKAAPVLGGVSVWPVFLALATLSSGAAIFTMLTAHARKARRYDFNTLV EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH LLLVWLLIMPGFYAALQFSHAAFLTGFTGVLACLKYGSSWRGWCAGVFLCVLGSMVRLDA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ALVCDAFWGAILLAGSLEGLRPSREKLFALSRLWLALACVLIASFSLNEYNKYAHRNVLE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GCDVAAWNQARALLSDTCPIRQESAYQCEKYGVFSNDIRMVRMFTNCDMDVFNTDYLERL CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHH LLARDGGEFWPRAWARGEKALHLFSWDSVMDLLPCWILFGLACRVSFRRGDSPALVCCVG HHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SLLVLILLYMASIDRLYFRVVYPTFLIAGLCLLWSDKYRPIRITWTGKGALAGGVPMFCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH FSVSLSQACAAVWEANLESFSPDAGRLLCERVDREPDSLFCVQMSGGTIDDLAPGQSVFR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHH KAWSCSRKNVVTLGGWNFPLKPVQRKLKEMGWEGQSSLNLCRDNVYIVCLTPQGDVSDMD HHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCHHHH SKFMGMLSRHIWEQHGVRTAWHLDENIQGVRVYRLRKTWFQPGRKEAASVREMRLSAM HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLKQIWRWVSLFPLLHPVWFNLLLLVLAWSLVGVAYQSNDDLVIASVLDGWGDPSYADAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHCCCCCCCCCCEE VIFVNPLLTGLLLKAAPVLGGVSVWPVFLALATLSSGAAIFTMLTAHARKARRYDFNTLV EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH LLLVWLLIMPGFYAALQFSHAAFLTGFTGVLACLKYGSSWRGWCAGVFLCVLGSMVRLDA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ALVCDAFWGAILLAGSLEGLRPSREKLFALSRLWLALACVLIASFSLNEYNKYAHRNVLE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GCDVAAWNQARALLSDTCPIRQESAYQCEKYGVFSNDIRMVRMFTNCDMDVFNTDYLERL CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHH LLARDGGEFWPRAWARGEKALHLFSWDSVMDLLPCWILFGLACRVSFRRGDSPALVCCVG HHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SLLVLILLYMASIDRLYFRVVYPTFLIAGLCLLWSDKYRPIRITWTGKGALAGGVPMFCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH FSVSLSQACAAVWEANLESFSPDAGRLLCERVDREPDSLFCVQMSGGTIDDLAPGQSVFR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHH KAWSCSRKNVVTLGGWNFPLKPVQRKLKEMGWEGQSSLNLCRDNVYIVCLTPQGDVSDMD HHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCHHHH SKFMGMLSRHIWEQHGVRTAWHLDENIQGVRVYRLRKTWFQPGRKEAASVREMRLSAM HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA