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The map label for this gene is yurY [H]

Identifier: 187734994

GI number: 187734994

Start: 574278

End: 575036

Strand: Direct

Name: yurY [H]

Synonym: Amuc_0487

Alternate gene names: 187734994

Gene position: 574278-575036 (Clockwise)

Preceding gene: 187734993

Following gene: 187734995

Centisome position: 21.56

GC content: 54.81

Gene sequence:

>759_bases
ATGAGTCTGGTCATTAAAAATTTGCACGCCAACGTGCAAGGCACGGAAATACTTAAAGGCATCAATCTGGAAATTCCCAA
GGGAGAGGTGCATGCAATCATGGGGCCCAACGGCTCCGGGAAAAGTACTTTATCCAAAGTTCTTTGCGGACATCCGGACT
ATGAGGTAACGGAGGGAGAAGCCTGGCTGGACGGACAGAACCTGCTGGACATGAGCATTGACGAACGCAGCAGGGCGGGA
CTCTTCCTGGCATTCCAGTACCCCATGGAAGTTCCCGGCGTTTCCAACGCCAACTTCCTTCGTGCGGCCATGCAGGCCCG
CATGCCCCATGGGGAGGAACTGGATGCGGTCACCTTCTACAAAACGCTCTATGCAAAAATGGACCAGCTCGGCATGGCCC
GCAAATTCACGTCACGCGCCGTTAACGAAGGTTTCTCCGGGGGAGAGAAAAAGCGCAATGAAGTGCTGCAAATGCTTCTC
CTGGATCCCCTCTATGCCATTCTGGACGAAACGGATTCCGGCCTGGACATAGATGCCCTCCGCATTGTCTCGGAAGGAGT
CAACTCCATGCGTTCCCCTTTCCGGAGCTTCCTGGTCATCACCCACTACAAACGCCTGCTGGACTACATCAGGCCGGATG
TGGTCCATGTACTGGCTGACGGGCGGATTGTCCGGACCGGAGGCGGAGAACTGGTGGACGAACTGGAAAGCAGGGGATAC
GAGTTCCTGAAAGAAACGGAAACAGCGGAAAAGGCATAA

Upstream 100 bases:

>100_bases
GGAATTCATCAACTTGCCCGACGACGTGTGCGTGGAAGAAGCCCAAATCACCCTGAGGGGTTCCATCACCACGCCGCAGG
GCTAACTCTCTTTCATCATC

Downstream 100 bases:

>100_bases
CGCCGCCAATCCGGCAATCAATCATGAGCGATACACCTGACATGTCAGAGAACGGGAACACACAGAACCTGTTTGACTTC
GACCGGAGCAAGGGAAACTT

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSLVIKNLHANVQGTEILKGINLEIPKGEVHAIMGPNGSGKSTLSKVLCGHPDYEVTEGEAWLDGQNLLDMSIDERSRAG
LFLAFQYPMEVPGVSNANFLRAAMQARMPHGEELDAVTFYKTLYAKMDQLGMARKFTSRAVNEGFSGGEKKRNEVLQMLL
LDPLYAILDETDSGLDIDALRIVSEGVNSMRSPFRSFLVITHYKRLLDYIRPDVVHVLADGRIVRTGGGELVDELESRGY
EFLKETETAEKA

Sequences:

>Translated_252_residues
MSLVIKNLHANVQGTEILKGINLEIPKGEVHAIMGPNGSGKSTLSKVLCGHPDYEVTEGEAWLDGQNLLDMSIDERSRAG
LFLAFQYPMEVPGVSNANFLRAAMQARMPHGEELDAVTFYKTLYAKMDQLGMARKFTSRAVNEGFSGGEKKRNEVLQMLL
LDPLYAILDETDSGLDIDALRIVSEGVNSMRSPFRSFLVITHYKRLLDYIRPDVVHVLADGRIVRTGGGELVDELESRGY
EFLKETETAEKA
>Mature_251_residues
SLVIKNLHANVQGTEILKGINLEIPKGEVHAIMGPNGSGKSTLSKVLCGHPDYEVTEGEAWLDGQNLLDMSIDERSRAGL
FLAFQYPMEVPGVSNANFLRAAMQARMPHGEELDAVTFYKTLYAKMDQLGMARKFTSRAVNEGFSGGEKKRNEVLQMLLL
DPLYAILDETDSGLDIDALRIVSEGVNSMRSPFRSFLVITHYKRLLDYIRPDVVHVLADGRIVRTGGGELVDELESRGYE
FLKETETAEKA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=213, Percent_Identity=28.169014084507, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI42490749, Length=249, Percent_Identity=28.9156626506024, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI9961250, Length=218, Percent_Identity=27.9816513761468, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=54.251012145749, Blast_Score=268, Evalue=3e-73,
Organism=Escherichia coli, GI1787143, Length=223, Percent_Identity=30.4932735426009, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787029, Length=243, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=24.1525423728814, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788225, Length=254, Percent_Identity=29.5275590551181, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786398, Length=230, Percent_Identity=27.3913043478261, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790162, Length=213, Percent_Identity=28.169014084507, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786654, Length=230, Percent_Identity=26.9565217391304, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787792, Length=230, Percent_Identity=25.2173913043478, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=235, Percent_Identity=28.0851063829787, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786345, Length=179, Percent_Identity=30.7262569832402, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=219, Percent_Identity=28.7671232876712, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=216, Percent_Identity=27.3148148148148, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=28.310502283105, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=28.310502283105, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=220, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=216, Percent_Identity=28.7037037037037, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=238, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=213, Percent_Identity=25.3521126760563, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24659289, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85726357, Length=214, Percent_Identity=26.1682242990654, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27979; Mature: 27848

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVIKNLHANVQGTEILKGINLEIPKGEVHAIMGPNGSGKSTLSKVLCGHPDYEVTEGE
CCEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
AWLDGQNLLDMSIDERSRAGLFLAFQYPMEVPGVSNANFLRAAMQARMPHGEELDAVTFY
EEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
KTLYAKMDQLGMARKFTSRAVNEGFSGGEKKRNEVLQMLLLDPLYAILDETDSGLDIDAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RIVSEGVNSMRSPFRSFLVITHYKRLLDYIRPDVVHVLADGRIVRTGGGELVDELESRGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCHHHHHHHHHCCH
EFLKETETAEKA
HHHHHHHHHCCC
>Mature Secondary Structure 
SLVIKNLHANVQGTEILKGINLEIPKGEVHAIMGPNGSGKSTLSKVLCGHPDYEVTEGE
CEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
AWLDGQNLLDMSIDERSRAGLFLAFQYPMEVPGVSNANFLRAAMQARMPHGEELDAVTFY
EEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
KTLYAKMDQLGMARKFTSRAVNEGFSGGEKKRNEVLQMLLLDPLYAILDETDSGLDIDAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RIVSEGVNSMRSPFRSFLVITHYKRLLDYIRPDVVHVLADGRIVRTGGGELVDELESRGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCHHHHHHHHHCCH
EFLKETETAEKA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]