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The map label for this gene is yfhR [C]

Identifier: 187734989

GI number: 187734989

Start: 571694

End: 572512

Strand: Direct

Name: yfhR [C]

Synonym: Amuc_0482

Alternate gene names: 187734989

Gene position: 571694-572512 (Clockwise)

Preceding gene: 187734988

Following gene: 187734991

Centisome position: 21.46

GC content: 57.26

Gene sequence:

>819_bases
ATGAATCTTCTGAGGATACTGAAAACGGGAACATGGAAAATCCCGTGCGCACTTCTGCTTGCCGGGGTTCTGGCTCTGGC
ATGCGTCCAGTGTTCCGTCCGTTCCCTAGTGTACCTGCCGCCCCAACCCAAGGACAAAACCGCGTATCTGGAAAAACGTG
CCGCCTGGGAACCGCATCGGCGCACCTTCCACCATAATGGGGCCAAACTCAGCGGATGGCTTATTGAAAAAAAGGGGCAG
CCCCTCCTAGTATATTACGGAGGGAACGCCATGGATATTTCCATGATGCTTCCCTACCTGGACCGTTTTCCCCATGCCAA
ACTCCTGGTCAATTACCGCGGGTACGGGCTCAGCACCGGCTCTCCTACGGAACAGGATATCATGGGAGACTCCCTGGCTA
TCCTTGACTCCGTGCTGAAGGAAACCGGAAGAACGCCGGACGACGTCATCCTGGTCGGGCAAAGCCTCGGTTCCGGAGTC
GCTACCCAGGTAGCCTCCGTCAGACACGTGAAAAAACTGGTGCTGCTGGTCCCTTTTGACAGCCTTCTGGAAACTGCCCG
CGGTCTCTTCCCATACCTGCCCGTCAGGCTTCTCCTTCCGGACCACTTCCGGTCAGACCTGGCCGCGCCCAAAGTCGCCT
GCCCTGTCAGCATCCTGGCTGCGGGAGCGGATGAAGTCATTCCTCCGCACCACGCCAAACGGCTCCGGGACTGTTTCTCC
GTACCGGTCAGTTACCAGGAATTCCCCGGAGCCATGCATAATACCATCTGGCTCAGCCCCGGCTTTGATAAAGCGTTTTC
TCAAAGCATCGGGTACTGA

Upstream 100 bases:

>100_bases
AAAAAACGGCCTTCCTGAATGGCTGGAGCTGCCAGGAACGGGGCACAGCCCTGCTCCGTTCCGGGACAACCGGAGCCATG
ACCACGGAAAAAAACGTCCC

Downstream 100 bases:

>100_bases
TCTCCGTTTTATTCCGCAGGAGCCAGAGATACGCGGCGCAGGCAGCTTCCTTCATGTTCCAGCAGCAGCCATGAGGTTTC
TTCCGGCAGCGCTTCCGGAA

Product: hydrolase of the alpha/beta superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNLLRILKTGTWKIPCALLLAGVLALACVQCSVRSLVYLPPQPKDKTAYLEKRAAWEPHRRTFHHNGAKLSGWLIEKKGQ
PLLVYYGGNAMDISMMLPYLDRFPHAKLLVNYRGYGLSTGSPTEQDIMGDSLAILDSVLKETGRTPDDVILVGQSLGSGV
ATQVASVRHVKKLVLLVPFDSLLETARGLFPYLPVRLLLPDHFRSDLAAPKVACPVSILAAGADEVIPPHHAKRLRDCFS
VPVSYQEFPGAMHNTIWLSPGFDKAFSQSIGY

Sequences:

>Translated_272_residues
MNLLRILKTGTWKIPCALLLAGVLALACVQCSVRSLVYLPPQPKDKTAYLEKRAAWEPHRRTFHHNGAKLSGWLIEKKGQ
PLLVYYGGNAMDISMMLPYLDRFPHAKLLVNYRGYGLSTGSPTEQDIMGDSLAILDSVLKETGRTPDDVILVGQSLGSGV
ATQVASVRHVKKLVLLVPFDSLLETARGLFPYLPVRLLLPDHFRSDLAAPKVACPVSILAAGADEVIPPHHAKRLRDCFS
VPVSYQEFPGAMHNTIWLSPGFDKAFSQSIGY
>Mature_272_residues
MNLLRILKTGTWKIPCALLLAGVLALACVQCSVRSLVYLPPQPKDKTAYLEKRAAWEPHRRTFHHNGAKLSGWLIEKKGQ
PLLVYYGGNAMDISMMLPYLDRFPHAKLLVNYRGYGLSTGSPTEQDIMGDSLAILDSVLKETGRTPDDVILVGQSLGSGV
ATQVASVRHVKKLVLLVPFDSLLETARGLFPYLPVRLLLPDHFRSDLAAPKVACPVSILAAGADEVIPPHHAKRLRDCFS
VPVSYQEFPGAMHNTIWLSPGFDKAFSQSIGY

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

Organism=Homo sapiens, GI49355781, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI32451492, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32528310, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71988362, Length=263, Percent_Identity=28.8973384030418, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI17137566, Length=203, Percent_Identity=31.0344827586207, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 29927; Mature: 29927

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLRILKTGTWKIPCALLLAGVLALACVQCSVRSLVYLPPQPKDKTAYLEKRAAWEPHR
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHH
RTFHHNGAKLSGWLIEKKGQPLLVYYGGNAMDISMMLPYLDRFPHAKLLVNYRGYGLSTG
HHHCCCCCEEEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCCCEEEEEECCCCCCCC
SPTEQDIMGDSLAILDSVLKETGRTPDDVILVGQSLGSGVATQVASVRHVKKLVLLVPFD
CCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCH
SLLETARGLFPYLPVRLLLPDHFRSDLAAPKVACPVSILAAGADEVIPPHHAKRLRDCFS
HHHHHHHCCHHHCCHHEECCHHHHHHHCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHH
VPVSYQEFPGAMHNTIWLSPGFDKAFSQSIGY
CCCCHHHCCCCHHCEEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MNLLRILKTGTWKIPCALLLAGVLALACVQCSVRSLVYLPPQPKDKTAYLEKRAAWEPHR
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHH
RTFHHNGAKLSGWLIEKKGQPLLVYYGGNAMDISMMLPYLDRFPHAKLLVNYRGYGLSTG
HHHCCCCCEEEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCCCEEEEEECCCCCCCC
SPTEQDIMGDSLAILDSVLKETGRTPDDVILVGQSLGSGVATQVASVRHVKKLVLLVPFD
CCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCH
SLLETARGLFPYLPVRLLLPDHFRSDLAAPKVACPVSILAAGADEVIPPHHAKRLRDCFS
HHHHHHHCCHHHCCHHEECCHHHHHHHCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHH
VPVSYQEFPGAMHNTIWLSPGFDKAFSQSIGY
CCCCHHHCCCCHHCEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]