| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734988
Identifier: 187734988
GI number: 187734988
Start: 571230
End: 571697
Strand: Direct
Name: 187734988
Synonym: Amuc_0481
Alternate gene names: NA
Gene position: 571230-571697 (Clockwise)
Preceding gene: 187734984
Following gene: 187734989
Centisome position: 21.44
GC content: 58.76
Gene sequence:
>468_bases ATGCGATCAGCATTCTTCCTACTGCCCGGCATCCTGCCGGCTCTTTCCGCCTGCGGGCGCGGAGGCGCCACGCTTGAAAC GGATAACGTCCAGGCGGAATGGTTCCCCAACGGCAGCAGAACGGCGATTGTCCTGGAAGGGGAAAGCGAACCCGTTTCCG AACGGGAAATCCGGCATCCCCATTCCGGCATGACTCTTTTTTACCATTCGCTGGGGGACGGCAGAGGAACTTTGGAAATC GCAGGAGGGGTTCCGGAAACGGCTACAGTAACATACAACCAGGGAGCGGCTTCCACGGAGCTGCATTTCAAAACGGCCTC CAGGGAAATACTTCTGAATGACGTACGCCGCCCGGACGCGAACGAAAAAACGGCCTTCCTGAATGGCTGGAGCTGCCAGG AACGGGGCACAGCCCTGCTCCGTTCCGGGACAACCGGAGCCATGACCACGGAAAAAAACGTCCCATGA
Upstream 100 bases:
>100_bases CCCGTATTCCTTCTATCAGAAAAAATATGGATCGTCCAGAAGCTTCCATCAGAGAAAAAGAGAGATTGCCTTCCATACCG AATTCAGGGACACTGTCTCC
Downstream 100 bases:
>100_bases ATCTTCTGAGGATACTGAAAACGGGAACATGGAAAATCCCGTGCGCACTTCTGCTTGCCGGGGTTCTGGCTCTGGCATGC GTCCAGTGTTCCGTCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRSAFFLLPGILPALSACGRGGATLETDNVQAEWFPNGSRTAIVLEGESEPVSEREIRHPHSGMTLFYHSLGDGRGTLEI AGGVPETATVTYNQGAASTELHFKTASREILLNDVRRPDANEKTAFLNGWSCQERGTALLRSGTTGAMTTEKNVP
Sequences:
>Translated_155_residues MRSAFFLLPGILPALSACGRGGATLETDNVQAEWFPNGSRTAIVLEGESEPVSEREIRHPHSGMTLFYHSLGDGRGTLEI AGGVPETATVTYNQGAASTELHFKTASREILLNDVRRPDANEKTAFLNGWSCQERGTALLRSGTTGAMTTEKNVP >Mature_155_residues MRSAFFLLPGILPALSACGRGGATLETDNVQAEWFPNGSRTAIVLEGESEPVSEREIRHPHSGMTLFYHSLGDGRGTLEI AGGVPETATVTYNQGAASTELHFKTASREILLNDVRRPDANEKTAFLNGWSCQERGTALLRSGTTGAMTTEKNVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16648; Mature: 16648
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAFFLLPGILPALSACGRGGATLETDNVQAEWFPNGSRTAIVLEGESEPVSEREIRHP CCCCEEHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCCHHCCCC HSGMTLFYHSLGDGRGTLEIAGGVPETATVTYNQGAASTELHFKTASREILLNDVRRPDA CCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEEEHHCCCCCC NEKTAFLNGWSCQERGTALLRSGTTGAMTTEKNVP CCCEEEEECCCCCCCCCEEEECCCCCCEECCCCCC >Mature Secondary Structure MRSAFFLLPGILPALSACGRGGATLETDNVQAEWFPNGSRTAIVLEGESEPVSEREIRHP CCCCEEHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCCHHCCCC HSGMTLFYHSLGDGRGTLEIAGGVPETATVTYNQGAASTELHFKTASREILLNDVRRPDA CCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEEEHHCCCCCC NEKTAFLNGWSCQERGTALLRSGTTGAMTTEKNVP CCCEEEEECCCCCCCCCEEEECCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA