Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734962

Identifier: 187734962

GI number: 187734962

Start: 543375

End: 544352

Strand: Direct

Name: 187734962

Synonym: Amuc_0455

Alternate gene names: NA

Gene position: 543375-544352 (Clockwise)

Preceding gene: 187734961

Following gene: 187734963

Centisome position: 20.4

GC content: 57.16

Gene sequence:

>978_bases
ATGAACCTTCATCTTTTCCTTGCTTCCCTGGCAGCCACGCTCTCACTGGGCATTGCGGCACAAGCTTCTCCCGCCAAAGT
GGCCTGCGTAGGGGACAGCATCACCTTCGGCTCCGGCCTTAAACCCGGAGAAGCCCGGTATCCGCAAGTGCTCGCCACGC
TAATGGGCCCGGACTTTGACGTCAGAGGATTCGGCAATCCCGGAAAAACGGCGGGCGACTATCCGGGCCAAGCAGGACGC
TGGTACGGCAGCACCAGGGAACACAAGCAAGCCCTGGACTTCAAGGCGGATATTTATATTTGCAACCTTGGCATCAACGA
CACAGGCCGATGGTGGAACCCCGAACTGTTCTCCAAAGGCTATGAAGCGCTGCTCCAGGCATGGAAAAACGCCAATCCCA
AAGCACGGTTCTTTGCCTGGGGCCTGCTGGGGCCGGACTACCGCGGCCCGCTCAACAAAAAGGCATTCCCCGGCAACTGC
TATCCGGACGTACGCAAATATGCAGGCTCGGACAACGGCTCCGCCGCCAACCGCCCGGAAGCGGAAAAATTGATTGCCGC
CGTAGCGCGCAAGTACAAAGTCAGTCTCTTTGATGCGCTGCACCCGCTCTCCGACCATCCGGAATGGTATGTTGACGGGC
TGCATCCTACGGAACAGGGCGCACGGCGTATTGCGGAAATCACCTTCGCCAAGCTGGCAAAAAGCCTCAAGATTAAGCAG
CCCGTCCCCAGGCTGGAACCGGGTACCGGCAACGTGATCATCAACAACCCCGGTAATTCCGGCATTCTTCTGGACGGATG
GAAATTGACGGACGGCTCCAATACGCTCATTTTTGAAAACTCCACCGTCATCCATCCCAAGGACAGGCTTATCATCGCCA
TTGGCCCGGAGACCCAAAAAGACCCGACCAGGCCCCTGCAAATCAAATCCGCCAAATCCCCCGCAGCTTTCCGCCTCATT
CCCGCAAAAAAATATTAA

Upstream 100 bases:

>100_bases
CGTGACCCCCAACCTGGTCAACGGCAACCAACTCCCCGCCCGTCCCTTCCGGACGGACACACCCGTTCTGAAAAAATAAC
TCTTACCACGCCATCATTCC

Downstream 100 bases:

>100_bases
AAACCACTGGAACAGTTTCATTGGGAACATGCAGCAGTTCCGTATGTTCCCAAATACCCGGCGCACTCTATTCGCGCCCT
TACGCACCGAGGCAGGCGGC

Product: lipolytic protein G-D-S-L family

Products: NA

Alternate protein names: Xylanase; O-Antigen-Like Protein; Lipolytic Protein G-D-S-L Family

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNLHLFLASLAATLSLGIAAQASPAKVACVGDSITFGSGLKPGEARYPQVLATLMGPDFDVRGFGNPGKTAGDYPGQAGR
WYGSTREHKQALDFKADIYICNLGINDTGRWWNPELFSKGYEALLQAWKNANPKARFFAWGLLGPDYRGPLNKKAFPGNC
YPDVRKYAGSDNGSAANRPEAEKLIAAVARKYKVSLFDALHPLSDHPEWYVDGLHPTEQGARRIAEITFAKLAKSLKIKQ
PVPRLEPGTGNVIINNPGNSGILLDGWKLTDGSNTLIFENSTVIHPKDRLIIAIGPETQKDPTRPLQIKSAKSPAAFRLI
PAKKY

Sequences:

>Translated_325_residues
MNLHLFLASLAATLSLGIAAQASPAKVACVGDSITFGSGLKPGEARYPQVLATLMGPDFDVRGFGNPGKTAGDYPGQAGR
WYGSTREHKQALDFKADIYICNLGINDTGRWWNPELFSKGYEALLQAWKNANPKARFFAWGLLGPDYRGPLNKKAFPGNC
YPDVRKYAGSDNGSAANRPEAEKLIAAVARKYKVSLFDALHPLSDHPEWYVDGLHPTEQGARRIAEITFAKLAKSLKIKQ
PVPRLEPGTGNVIINNPGNSGILLDGWKLTDGSNTLIFENSTVIHPKDRLIIAIGPETQKDPTRPLQIKSAKSPAAFRLI
PAKKY
>Mature_325_residues
MNLHLFLASLAATLSLGIAAQASPAKVACVGDSITFGSGLKPGEARYPQVLATLMGPDFDVRGFGNPGKTAGDYPGQAGR
WYGSTREHKQALDFKADIYICNLGINDTGRWWNPELFSKGYEALLQAWKNANPKARFFAWGLLGPDYRGPLNKKAFPGNC
YPDVRKYAGSDNGSAANRPEAEKLIAAVARKYKVSLFDALHPLSDHPEWYVDGLHPTEQGARRIAEITFAKLAKSLKIKQ
PVPRLEPGTGNVIINNPGNSGILLDGWKLTDGSNTLIFENSTVIHPKDRLIIAIGPETQKDPTRPLQIKSAKSPAAFRLI
PAKKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35408; Mature: 35408

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLHLFLASLAATLSLGIAAQASPAKVACVGDSITFGSGLKPGEARYPQVLATLMGPDFD
CCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHCCCCC
VRGFGNPGKTAGDYPGQAGRWYGSTREHKQALDFKADIYICNLGINDTGRWWNPELFSKG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHHHHH
YEALLQAWKNANPKARFFAWGLLGPDYRGPLNKKAFPGNCYPDVRKYAGSDNGSAANRPE
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
AEKLIAAVARKYKVSLFDALHPLSDHPEWYVDGLHPTEQGARRIAEITFAKLAKSLKIKQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PVPRLEPGTGNVIINNPGNSGILLDGWKLTDGSNTLIFENSTVIHPKDRLIIAIGPETQK
CCCCCCCCCCCEEEECCCCCCEEEECEEEECCCCEEEECCCEEECCCCCEEEEECCCCCC
DPTRPLQIKSAKSPAAFRLIPAKKY
CCCCCEEEECCCCCCEEEEECCCCC
>Mature Secondary Structure
MNLHLFLASLAATLSLGIAAQASPAKVACVGDSITFGSGLKPGEARYPQVLATLMGPDFD
CCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHCCCCC
VRGFGNPGKTAGDYPGQAGRWYGSTREHKQALDFKADIYICNLGINDTGRWWNPELFSKG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHHHHH
YEALLQAWKNANPKARFFAWGLLGPDYRGPLNKKAFPGNCYPDVRKYAGSDNGSAANRPE
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
AEKLIAAVARKYKVSLFDALHPLSDHPEWYVDGLHPTEQGARRIAEITFAKLAKSLKIKQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PVPRLEPGTGNVIINNPGNSGILLDGWKLTDGSNTLIFENSTVIHPKDRLIIAIGPETQK
CCCCCCCCCCCEEEECCCCCCEEEECEEEECCCCEEEECCCEEECCCCCEEEEECCCCCC
DPTRPLQIKSAKSPAAFRLIPAKKY
CCCCCEEEECCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA