Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734960

Identifier: 187734960

GI number: 187734960

Start: 541001

End: 541804

Strand: Direct

Name: 187734960

Synonym: Amuc_0453

Alternate gene names: NA

Gene position: 541001-541804 (Clockwise)

Preceding gene: 187734956

Following gene: 187734961

Centisome position: 20.31

GC content: 57.84

Gene sequence:

>804_bases
ATGATACAAATATTTCCCTCCGAATTCATGGATAAAACGCCAAACAAATCACAGTCCTCCCTGCTGGGAATTTTCATCAA
CATCCTCCTCCCGGTACTGATTCTGGACTACTGCAGCGCAGGCCCCGCCAATCCCCTGGAACGTCCGGAGGGAGAAAGTT
TCTGGCATATCGGCCCGGTATGGTCTCTCGTCATCGCCCTTTCCCTCCCACTCGTCTATGGCATCCGTTCCCTGGCCGTC
TCCAGGAAATTTGACCTGATGTCCGGCGTAGGCATGGCCGGCGTGCTGCTGACGGGCGTCATCAGCATCTTCGTCATCGG
GCCGGAAGGGCGCATCCACAGCGCCACACCCTGGCTGTTCGCCGGAAAAGAAGCCCTGATCCCCCTCATCCTGGCGGCGG
CCGTCGTCGTCTCCCGCTCCACCGGCACCCCCCTCCTCAACATGTTCATCTACACGACGGAGTTATTCGACGTGCGCAGG
ATAGAACAAACGGTGGCCGCCAACGGCGAGGAACAGGCTTACCAGAGCCTGCTGGCAAACTCGTCATGGATTCTGGCGGG
CACATTGGTCGCATCCTCCGTCGGCAATTTCTTCCTGAGCCTCTCTTTCATGTCCTCCGTCATACGCCAGCCGGAAGCGG
AACAGCAAGTGGCCTACAATGCCGCTATCGGCAGCATCACCTGGTGGGGCTTCCTGATCATCGGGATCCCCATTCTGGCA
GCTCTTGTCTTCATCATGACCCGCCTGATTAAACAGCTCGGCAGGCTGACCGGGCTCTCACGGAACGAACTCCTTCTCAA
ATAA

Upstream 100 bases:

>100_bases
CGATTTCCGCAAAGCCGCCTGCGAATAAAAAAACGGCTCTCCCCGCTTCTGGTCTTTACTGTCACACACGGGGTTGCAAC
TTGCAGGGGCGCATTCGCGT

Downstream 100 bases:

>100_bases
TCCTCAAACCATGCGCCTCCATACTTCATGCATCCTGGCTGCCGCCATCGCCCTTAACGCAGCGTGGGCGGACGCCCCCC
GGTTCGACCGGATTTTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIQIFPSEFMDKTPNKSQSSLLGIFINILLPVLILDYCSAGPANPLERPEGESFWHIGPVWSLVIALSLPLVYGIRSLAV
SRKFDLMSGVGMAGVLLTGVISIFVIGPEGRIHSATPWLFAGKEALIPLILAAAVVVSRSTGTPLLNMFIYTTELFDVRR
IEQTVAANGEEQAYQSLLANSSWILAGTLVASSVGNFFLSLSFMSSVIRQPEAEQQVAYNAAIGSITWWGFLIIGIPILA
ALVFIMTRLIKQLGRLTGLSRNELLLK

Sequences:

>Translated_267_residues
MIQIFPSEFMDKTPNKSQSSLLGIFINILLPVLILDYCSAGPANPLERPEGESFWHIGPVWSLVIALSLPLVYGIRSLAV
SRKFDLMSGVGMAGVLLTGVISIFVIGPEGRIHSATPWLFAGKEALIPLILAAAVVVSRSTGTPLLNMFIYTTELFDVRR
IEQTVAANGEEQAYQSLLANSSWILAGTLVASSVGNFFLSLSFMSSVIRQPEAEQQVAYNAAIGSITWWGFLIIGIPILA
ALVFIMTRLIKQLGRLTGLSRNELLLK
>Mature_267_residues
MIQIFPSEFMDKTPNKSQSSLLGIFINILLPVLILDYCSAGPANPLERPEGESFWHIGPVWSLVIALSLPLVYGIRSLAV
SRKFDLMSGVGMAGVLLTGVISIFVIGPEGRIHSATPWLFAGKEALIPLILAAAVVVSRSTGTPLLNMFIYTTELFDVRR
IEQTVAANGEEQAYQSLLANSSWILAGTLVASSVGNFFLSLSFMSSVIRQPEAEQQVAYNAAIGSITWWGFLIIGIPILA
ALVFIMTRLIKQLGRLTGLSRNELLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29023; Mature: 29023

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIFPSEFMDKTPNKSQSSLLGIFINILLPVLILDYCSAGPANPLERPEGESFWHIGPV
CCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHH
WSLVIALSLPLVYGIRSLAVSRKFDLMSGVGMAGVLLTGVISIFVIGPEGRIHSATPWLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCCCCHH
AGKEALIPLILAAAVVVSRSTGTPLLNMFIYTTELFDVRRIEQTVAANGEEQAYQSLLAN
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SSWILAGTLVASSVGNFFLSLSFMSSVIRQPEAEQQVAYNAAIGSITWWGFLIIGIPILA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVFIMTRLIKQLGRLTGLSRNELLLK
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIQIFPSEFMDKTPNKSQSSLLGIFINILLPVLILDYCSAGPANPLERPEGESFWHIGPV
CCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHH
WSLVIALSLPLVYGIRSLAVSRKFDLMSGVGMAGVLLTGVISIFVIGPEGRIHSATPWLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCCCCHH
AGKEALIPLILAAAVVVSRSTGTPLLNMFIYTTELFDVRRIEQTVAANGEEQAYQSLLAN
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SSWILAGTLVASSVGNFFLSLSFMSSVIRQPEAEQQVAYNAAIGSITWWGFLIIGIPILA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVFIMTRLIKQLGRLTGLSRNELLLK
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA