| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734948
Identifier: 187734948
GI number: 187734948
Start: 524048
End: 524971
Strand: Direct
Name: 187734948
Synonym: Amuc_0441
Alternate gene names: NA
Gene position: 524048-524971 (Clockwise)
Preceding gene: 187734939
Following gene: 187734949
Centisome position: 19.67
GC content: 59.96
Gene sequence:
>924_bases ATGAACATCCGGATTCTGAGCGATGGGAAACAGGGCCACCTCAACCAGTCCCTGGGGCTGGCGCAGGCTCTGATCTCCAA AGCGGGGGGAACCGTGGAAACGGTAGACCTGCAGGGGCTTTCCCTTTTGGGGAAAATCCGGAAGGTCGTCACAGGCAGCG ACATTCCACGGCCGGATCTGTTCATTTCCGCCGGACATGCAACGCATATCCCGCTCATCTGCGCGCGGCACCATTTCAAA ACCCGGGCCGTCCTCTGCATGAAGCCTACGCTTCCCTGCTCCTTTTTCGACCTCTGCCTTATTCCCCGCCATGACCTGGA TTCCGGCCGCGATTACACGGATACGGATATCTTCCCCACCCAGGGAGCTCTCCACCCCATGAGACCGGATCCCTCCGTAC CAAAGGATACCACACTGATTCTCATAGGAGGGCCCAGCAAAGATTTTGACTGGGATGACGAAAGCATGCTCAACCAGCTC GCGTCCATCAGCATCCACACCCCCGGACACCTTGTTCTAACCACCTCGCGCCGGACGCCGGACGGCTTTGCGGAAAAAAT CCGGACGGCCGTTCCGGAACTAACCGTCGTTCCCGTGGAGGAAACCCGGCCGGGGTGGGTAGCCCGGCATCTGGCGCACG CCTCCGCCGCCTGGGTCAGCCAGGACAGCGTCTCCATGGTATATGAGGCTCTTGGCTCCGGCGCGCCTGTAGGCATCCTT TCCGTACCGCGCCGACACGGCAGCCGCAAATCCCGCATCCTGTCCGGCCTGGAGACACTGGAAAAGGAAGGCATGGTTAC TGGATACAGTGACTGGAAAAAACAGAACTTCCGCCTGACGGCTCCCGGTTCCCCGCTTCTGGAAGCGGACCGTGCAGCAG ACTACATCCTCTCCAGATTTTTCCCTCAGCTCCGCGCCTTATGA
Upstream 100 bases:
>100_bases CGGAATCATGAACAAGAGCATGCCTCCCACCAAGAATTTTCTTCTGTCCGGTGGAAATTGGATTGCCTGCACCCCGCCGC CGCTTCATAATGCCGCATAT
Downstream 100 bases:
>100_bases AAATAGTACATCTCGTCCCCTCCATGGAATCCGGAGGCGTGGAACAAGTCGTTATGGAACTGGGCAGCGGCCTTTCTTCC CGGGGCGTGGAAAATATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL
Sequences:
>Translated_307_residues MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL >Mature_307_residues MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL
Specific function: Unknown
COG id: COG3660
COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33549; Mature: 33549
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDL CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCE FISAGHATHIPLICARHHFKTRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPT EEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC QGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQLASISIHTPGHLVLTTSRRTP CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCC DGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRF ECCCCCCCHHHHHHHHHHHHHHCCCEECCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH FPQLRAL HHHHHCC >Mature Secondary Structure MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDL CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCE FISAGHATHIPLICARHHFKTRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPT EEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC QGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQLASISIHTPGHLVLTTSRRTP CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCC DGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRF ECCCCCCCHHHHHHHHHHHHHHCCCEECCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH FPQLRAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA