Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734941

Identifier: 187734941

GI number: 187734941

Start: 518185

End: 519105

Strand: Reverse

Name: 187734941

Synonym: Amuc_0434

Alternate gene names: NA

Gene position: 519105-518185 (Counterclockwise)

Preceding gene: 187734942

Following gene: 187734940

Centisome position: 19.49

GC content: 50.71

Gene sequence:

>921_bases
ATGATGCAATTCAGAAATATCATTGGTGTTGCGGGGGGTGCCGTTTTTCTTGCCGCTTCCGCTTTTGCGGGAATTTCCGT
TAAAACTGTTTCTCCTGTTCCCGTGGAACAGGACTGTCCTTTGTCCGGGGAAGTTGATGCCGGGTATGCTTCCAATTACA
CCTGCCGCGGCATTGTGGCTTCTCATTCACTGACGGAAGGAGATGGAATTATTCCTGCCAGTGTGGATTTGAATTATAAG
CTGGATGATTGTAATTCCGTTGTTGGGGCGGCATCTTGTACGTTCCTGATTTCAGGACACCACATGGCAGGGGAAAGAGA
TTTCTCTTTTCATAACGAGACTGATTTTCTTTTTGGATGGAAGAACCGGGACGGTTTACTGAAGAACCTGTCCACGACGC
TTGGCTGGAACCTGATTCACGGCGGCCTGCTTGGGAATTTTGCCAGGTATGATTATAACGCCACCTGGATGAGTGATGAA
GATGTGTATAGAAGGAATACCCATTCCGTCATTCAGGAATTTTATCTGACGCTGGATTACGGTTTGCCCGGAAACTGGTT
TGCCGGCGTAGCCATGAGCTATGCCTTCCAGGGCATGACCGGCTGGTGGTTCCGGCCGCATGTGGGGTATCAGGCTGCTA
TCTGCTCCGACGCCGATTTTGTATTGAGCGCCGGGATGTCTGCCACTTCCTCTTATTTTGACAATAAATCCCTTTTTATG
TCCAACGGTTCCCAGGCATGGTGGCTGAAGGCTGAACTTCCGGTGAAGCTGGGTGCCAAGAACCTGTCTCTCGTTCCCTT
CGTCAGCTTCAACTGGGCCGGAGAGGGCGCCTTGAAGGCCAACCGAGGTTCGGACAGGGGCGACAAGCCTTATAAGAATT
TCGGAGTAGTGGCCGGGGCTGGTCTCGTTTATTTTTTCTGA

Upstream 100 bases:

>100_bases
AGAAATCCGCCGCGCTTTTTTTAATTGATGGCGGCGCATTGTTTTTTATGAACTCCGTTTTTTGCAATGCGCCGATATCC
AAATTTTCATTTGAAGCGTG

Downstream 100 bases:

>100_bases
AGTTGGCAGCGGGCAGGCCTGAATGATGTTTCCTGAAGCAGAGCAGGAAACAGCGGCGTTTTTGCTTGTTGCCAAGAGGA
GTTTTTTTATCCAGAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MMQFRNIIGVAGGAVFLAASAFAGISVKTVSPVPVEQDCPLSGEVDAGYASNYTCRGIVASHSLTEGDGIIPASVDLNYK
LDDCNSVVGAASCTFLISGHHMAGERDFSFHNETDFLFGWKNRDGLLKNLSTTLGWNLIHGGLLGNFARYDYNATWMSDE
DVYRRNTHSVIQEFYLTLDYGLPGNWFAGVAMSYAFQGMTGWWFRPHVGYQAAICSDADFVLSAGMSATSSYFDNKSLFM
SNGSQAWWLKAELPVKLGAKNLSLVPFVSFNWAGEGALKANRGSDRGDKPYKNFGVVAGAGLVYFF

Sequences:

>Translated_306_residues
MMQFRNIIGVAGGAVFLAASAFAGISVKTVSPVPVEQDCPLSGEVDAGYASNYTCRGIVASHSLTEGDGIIPASVDLNYK
LDDCNSVVGAASCTFLISGHHMAGERDFSFHNETDFLFGWKNRDGLLKNLSTTLGWNLIHGGLLGNFARYDYNATWMSDE
DVYRRNTHSVIQEFYLTLDYGLPGNWFAGVAMSYAFQGMTGWWFRPHVGYQAAICSDADFVLSAGMSATSSYFDNKSLFM
SNGSQAWWLKAELPVKLGAKNLSLVPFVSFNWAGEGALKANRGSDRGDKPYKNFGVVAGAGLVYFF
>Mature_306_residues
MMQFRNIIGVAGGAVFLAASAFAGISVKTVSPVPVEQDCPLSGEVDAGYASNYTCRGIVASHSLTEGDGIIPASVDLNYK
LDDCNSVVGAASCTFLISGHHMAGERDFSFHNETDFLFGWKNRDGLLKNLSTTLGWNLIHGGLLGNFARYDYNATWMSDE
DVYRRNTHSVIQEFYLTLDYGLPGNWFAGVAMSYAFQGMTGWWFRPHVGYQAAICSDADFVLSAGMSATSSYFDNKSLFM
SNGSQAWWLKAELPVKLGAKNLSLVPFVSFNWAGEGALKANRGSDRGDKPYKNFGVVAGAGLVYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33296; Mature: 33296

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQFRNIIGVAGGAVFLAASAFAGISVKTVSPVPVEQDCPLSGEVDAGYASNYTCRGIVA
CCCCHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
SHSLTEGDGIIPASVDLNYKLDDCNSVVGAASCTFLISGHHMAGERDFSFHNETDFLFGW
ECCCCCCCCEEEEEEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE
KNRDGLLKNLSTTLGWNLIHGGLLGNFARYDYNATWMSDEDVYRRNTHSVIQEFYLTLDY
CCCCCHHHHHHHHHCHHHHCCCHHHCHHHCCCCEEECCCCHHHHHHHHHHHHHHHEEEEC
GLPGNWFAGVAMSYAFQGMTGWWFRPHVGYQAAICSDADFVLSAGMSATSSYFDNKSLFM
CCCCCHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCHHHHHCCCCHHHHHCCCCEEEE
SNGSQAWWLKAELPVKLGAKNLSLVPFVSFNWAGEGALKANRGSDRGDKPYKNFGVVAGA
ECCCEEEEEEEECCEEECCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCHHCCEEECC
GLVYFF
EEEEEC
>Mature Secondary Structure
MMQFRNIIGVAGGAVFLAASAFAGISVKTVSPVPVEQDCPLSGEVDAGYASNYTCRGIVA
CCCCHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
SHSLTEGDGIIPASVDLNYKLDDCNSVVGAASCTFLISGHHMAGERDFSFHNETDFLFGW
ECCCCCCCCEEEEEEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE
KNRDGLLKNLSTTLGWNLIHGGLLGNFARYDYNATWMSDEDVYRRNTHSVIQEFYLTLDY
CCCCCHHHHHHHHHCHHHHCCCHHHCHHHCCCCEEECCCCHHHHHHHHHHHHHHHEEEEC
GLPGNWFAGVAMSYAFQGMTGWWFRPHVGYQAAICSDADFVLSAGMSATSSYFDNKSLFM
CCCCCHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCHHHHHCCCCHHHHHCCCCEEEE
SNGSQAWWLKAELPVKLGAKNLSLVPFVSFNWAGEGALKANRGSDRGDKPYKNFGVVAGA
ECCCEEEEEEEECCEEECCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCHHCCEEECC
GLVYFF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA