Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is ssuA [C]

Identifier: 187734916

GI number: 187734916

Start: 489481

End: 490527

Strand: Reverse

Name: ssuA [C]

Synonym: Amuc_0409

Alternate gene names: 187734916

Gene position: 490527-489481 (Counterclockwise)

Preceding gene: 187734919

Following gene: 187734915

Centisome position: 18.41

GC content: 59.69

Gene sequence:

>1047_bases
ATGACCCGTTCCAGATTCCTGATGATTTTACCGGCCCTGTTTTTATGCCTGCTGGCTGTTTCCTGCGGAAAGAAGGAGAA
GGAAGATCCCAATGTCGTGGAGTTGAACTTCGGTCATTTTCCCAACGTGACACATGTGCAGGGCCTGGTGGCGCATCATT
TTTCCCGGCAGGGGAAGGGGTGGTTTGAAGAACGGCTGAAGGAGGCTACCGGAAAGGATGTCAGGATCAACTGGTACGTG
TACAATGCGGGCCCCAGCGCCATGGAAGCCGTGTTCGCCCGGTCCATTGAACTGGCTTATGTGGGGCCCAGCCCGGCCAT
CAATGCGTTTGTGCGTTCCCGCGGGGAGGATATCAGGATGATTGCCGGAGCTGTGGAAGGAGGCGCCGCCCTGGTGGTTC
CGAAGGATTCCTTGCTGAAGGAGCCTGCGGATTTCCGCGGCAAGGTGATTGCTACTCCCCAACTGGGGAATACGCAGGAT
GTTTCCGCCCGCGCCTGGTTTTCCCGCGGCGGCCTGCATGTGACGCAGCGCGGCGGGGACGTGACGATTCTGCCGACTCC
CAACCCCGAACAGCTCAGCCTGTTCCGGCAGGGCAAGCTGGACGGCGTGTGGACGGTGGAACCCTGGGTGAGCCGCCTGG
TGCTGACGGCGGGAGGCAGGGTGCTGGTGGACGAGAAGGAGTCCATCGCGACCGTACTGGTATGCGGAGCGGAGTTTCTC
AGGGAAAAGCCGGAGGTGGCGAAAGCCCTGGTGCAGGCGCATGAGGAACTGAACGAATGGATAAGGCTGCATCCGGATGA
GGCCCAGTTAATCGTGGTCAGGGAGCTGGAGGAGCTGACGCATTCCAGAATAGACCCGGCATTGATTGCGGAGGCCTGGA
AAAGCATTGTCATCAAGGACAGGATTTCCATTCCCAAGCTCCGGCAGTTTGTGCAGGACGCCCATCAGGCCGGATTTATG
AAAGAGGTTCCGGATATAGGCGGCCTGGTGGTGCCGGAGGCGGCGGAGGAACAGTTGACCATGGCGAAGGAGGCGGGCGG
AAGATGA

Upstream 100 bases:

>100_bases
GTTGCCTTTGGCTTCTTGCCTCCGGCGGCTTCTTCTGCTAGTCGGTGCCTGAAAGGCCGCGGAAAAACGGCTGTGCCTCA
GTATCCCATTCTTTTTGCTT

Downstream 100 bases:

>100_bases
TTGCGGGTGCAGAACATTGCGGCCCCGGAGGCTGCAAGCTCCGTATTGCCGGCGTGAGCAAGGTGTTTGACGGGAGGCGC
GGAAAGGTGGTGGCTCTGGA

Product: substrate-binding protein of aliphatic sulfonate ABC transporter

Products: NA

Alternate protein names: NLPA Lipoprotein; ABC-Type Sulfonate Import System Periplasmic Component; ABC Transporter

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTRSRFLMILPALFLCLLAVSCGKKEKEDPNVVELNFGHFPNVTHVQGLVAHHFSRQGKGWFEERLKEATGKDVRINWYV
YNAGPSAMEAVFARSIELAYVGPSPAINAFVRSRGEDIRMIAGAVEGGAALVVPKDSLLKEPADFRGKVIATPQLGNTQD
VSARAWFSRGGLHVTQRGGDVTILPTPNPEQLSLFRQGKLDGVWTVEPWVSRLVLTAGGRVLVDEKESIATVLVCGAEFL
REKPEVAKALVQAHEELNEWIRLHPDEAQLIVVRELEELTHSRIDPALIAEAWKSIVIKDRISIPKLRQFVQDAHQAGFM
KEVPDIGGLVVPEAAEEQLTMAKEAGGR

Sequences:

>Translated_348_residues
MTRSRFLMILPALFLCLLAVSCGKKEKEDPNVVELNFGHFPNVTHVQGLVAHHFSRQGKGWFEERLKEATGKDVRINWYV
YNAGPSAMEAVFARSIELAYVGPSPAINAFVRSRGEDIRMIAGAVEGGAALVVPKDSLLKEPADFRGKVIATPQLGNTQD
VSARAWFSRGGLHVTQRGGDVTILPTPNPEQLSLFRQGKLDGVWTVEPWVSRLVLTAGGRVLVDEKESIATVLVCGAEFL
REKPEVAKALVQAHEELNEWIRLHPDEAQLIVVRELEELTHSRIDPALIAEAWKSIVIKDRISIPKLRQFVQDAHQAGFM
KEVPDIGGLVVPEAAEEQLTMAKEAGGR
>Mature_347_residues
TRSRFLMILPALFLCLLAVSCGKKEKEDPNVVELNFGHFPNVTHVQGLVAHHFSRQGKGWFEERLKEATGKDVRINWYVY
NAGPSAMEAVFARSIELAYVGPSPAINAFVRSRGEDIRMIAGAVEGGAALVVPKDSLLKEPADFRGKVIATPQLGNTQDV
SARAWFSRGGLHVTQRGGDVTILPTPNPEQLSLFRQGKLDGVWTVEPWVSRLVLTAGGRVLVDEKESIATVLVCGAEFLR
EKPEVAKALVQAHEELNEWIRLHPDEAQLIVVRELEELTHSRIDPALIAEAWKSIVIKDRISIPKLRQFVQDAHQAGFMK
EVPDIGGLVVPEAAEEQLTMAKEAGGR

Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38401; Mature: 38269

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRFLMILPALFLCLLAVSCGKKEKEDPNVVELNFGHFPNVTHVQGLVAHHFSRQGKG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
WFEERLKEATGKDVRINWYVYNAGPSAMEAVFARSIELAYVGPSPAINAFVRSRGEDIRM
HHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCEEE
IAGAVEGGAALVVPKDSLLKEPADFRGKVIATPQLGNTQDVSARAWFSRGGLHVTQRGGD
EEEECCCCEEEEEECHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEEECCCC
VTILPTPNPEQLSLFRQGKLDGVWTVEPWVSRLVLTAGGRVLVDEKESIATVLVCGAEFL
EEEEECCCCHHHHHHHCCCCCCEEEECHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHH
REKPEVAKALVQAHEELNEWIRLHPDEAQLIVVRELEELTHSRIDPALIAEAWKSIVIKD
HCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RISIPKLRQFVQDAHQAGFMKEVPDIGGLVVPEAAEEQLTMAKEAGGR
CCCCHHHHHHHHHHHHCCCHHHCCCCCCEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRSRFLMILPALFLCLLAVSCGKKEKEDPNVVELNFGHFPNVTHVQGLVAHHFSRQGKG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
WFEERLKEATGKDVRINWYVYNAGPSAMEAVFARSIELAYVGPSPAINAFVRSRGEDIRM
HHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCEEE
IAGAVEGGAALVVPKDSLLKEPADFRGKVIATPQLGNTQDVSARAWFSRGGLHVTQRGGD
EEEECCCCEEEEEECHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEEECCCC
VTILPTPNPEQLSLFRQGKLDGVWTVEPWVSRLVLTAGGRVLVDEKESIATVLVCGAEFL
EEEEECCCCHHHHHHHCCCCCCEEEECHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHH
REKPEVAKALVQAHEELNEWIRLHPDEAQLIVVRELEELTHSRIDPALIAEAWKSIVIKD
HCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RISIPKLRQFVQDAHQAGFMKEVPDIGGLVVPEAAEEQLTMAKEAGGR
CCCCHHHHHHHHHHHHCCCHHHCCCCCCEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA