Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734899

Identifier: 187734899

GI number: 187734899

Start: 472594

End: 473271

Strand: Reverse

Name: 187734899

Synonym: Amuc_0391

Alternate gene names: NA

Gene position: 473271-472594 (Counterclockwise)

Preceding gene: 187734902

Following gene: 187734898

Centisome position: 17.76

GC content: 56.49

Gene sequence:

>678_bases
ATGTCCTATTTCCGTTTTTTACTGCTGGCGCTGGTTTTTCTGACCGGTTCCGCGTTGATCAGCGAGAGCGCTCCCGTTTA
CATGGCCCGGCGGGACAGCAAGTTTGCGCTTGTTCCTCTTTGTGACGGTTTTGATTTTCCGGTAGGAAAGCCTGACGGCA
ACGGCTATTACCGGTCCCGCGGTCTGCGTCTGAAAAGCCCCCGTCACATGGGTGAGGATTGGAACGGCAATAAAGGAGGC
AATTCCGATTTGGGCGATCCCGTTTATTCCGTAGGCCACGGGGTGGTAACTTATGCGGCGGACGCCCGGGGCGCGTGGGG
AAAGGTGGTGATTGTGCGCCATGCTTTCCGCGAACCCAAGTCCGGAAAGGTTCTTTGCTGCCAGACGCTTTATTCCCATT
TGAACGATATTAACGTTGTTTTGGGGCAGTTGGTGCTGCGCGGCACCCAGGTGGGCACTATCGGCACGAACCGCGGCATG
TATCCGGCCCATCTTCATGTGGAGCTGCATTACAATCCGGATGTGAATTGCGGCCATCAGGGGATTCCCAAGACGGAGCG
CAATTACGGCCGCCTGACGGATTTTATTACCCGCTTCCGCCGCCTGCCTCTGGAGAAAAGGATGGTGCGCGTTCCCATCG
GCGGGTTTCTGCCTTACAAGGGAACGGAAGGACTCTGA

Upstream 100 bases:

>100_bases
ACATGGGGGAGCGTGTTAGTGAATTCTAACTCCGACATGCGGGGAATTCCGCTTGATACGGAGTAGGGAGCCGTTTAGCA
TACAAAGGACTTTCGTTCCC

Downstream 100 bases:

>100_bases
CTTCTGGTGGATGACGGTGAAGCTGTGTATTTTCGGCGGTTCGTTTGATCCCGTGCATGAGGGGCACGTTTGCATGGCCG
AGCATGCTCGGAAATATTGC

Product: Peptidase M23

Products: NA

Alternate protein names: Metalloendopeptidase; M23 Family Metalloendopeptidase

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGG
NSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGM
YPAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL

Sequences:

>Translated_225_residues
MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGG
NSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGM
YPAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL
>Mature_224_residues
SYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGGN
SDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMY
PAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24997; Mature: 24866

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSR
CHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCC
GLRLKSPRHMGEDWNGNKGGNSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPK
CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEEEHHCCCC
SGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMYPAHLHVELHYNPDVNCGHQ
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCC
GIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL
CCCCCCCHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSR
HHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCC
GLRLKSPRHMGEDWNGNKGGNSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPK
CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEEEHHCCCC
SGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMYPAHLHVELHYNPDVNCGHQ
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCC
GIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL
CCCCCCCHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA