| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734899
Identifier: 187734899
GI number: 187734899
Start: 472594
End: 473271
Strand: Reverse
Name: 187734899
Synonym: Amuc_0391
Alternate gene names: NA
Gene position: 473271-472594 (Counterclockwise)
Preceding gene: 187734902
Following gene: 187734898
Centisome position: 17.76
GC content: 56.49
Gene sequence:
>678_bases ATGTCCTATTTCCGTTTTTTACTGCTGGCGCTGGTTTTTCTGACCGGTTCCGCGTTGATCAGCGAGAGCGCTCCCGTTTA CATGGCCCGGCGGGACAGCAAGTTTGCGCTTGTTCCTCTTTGTGACGGTTTTGATTTTCCGGTAGGAAAGCCTGACGGCA ACGGCTATTACCGGTCCCGCGGTCTGCGTCTGAAAAGCCCCCGTCACATGGGTGAGGATTGGAACGGCAATAAAGGAGGC AATTCCGATTTGGGCGATCCCGTTTATTCCGTAGGCCACGGGGTGGTAACTTATGCGGCGGACGCCCGGGGCGCGTGGGG AAAGGTGGTGATTGTGCGCCATGCTTTCCGCGAACCCAAGTCCGGAAAGGTTCTTTGCTGCCAGACGCTTTATTCCCATT TGAACGATATTAACGTTGTTTTGGGGCAGTTGGTGCTGCGCGGCACCCAGGTGGGCACTATCGGCACGAACCGCGGCATG TATCCGGCCCATCTTCATGTGGAGCTGCATTACAATCCGGATGTGAATTGCGGCCATCAGGGGATTCCCAAGACGGAGCG CAATTACGGCCGCCTGACGGATTTTATTACCCGCTTCCGCCGCCTGCCTCTGGAGAAAAGGATGGTGCGCGTTCCCATCG GCGGGTTTCTGCCTTACAAGGGAACGGAAGGACTCTGA
Upstream 100 bases:
>100_bases ACATGGGGGAGCGTGTTAGTGAATTCTAACTCCGACATGCGGGGAATTCCGCTTGATACGGAGTAGGGAGCCGTTTAGCA TACAAAGGACTTTCGTTCCC
Downstream 100 bases:
>100_bases CTTCTGGTGGATGACGGTGAAGCTGTGTATTTTCGGCGGTTCGTTTGATCCCGTGCATGAGGGGCACGTTTGCATGGCCG AGCATGCTCGGAAATATTGC
Product: Peptidase M23
Products: NA
Alternate protein names: Metalloendopeptidase; M23 Family Metalloendopeptidase
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGG NSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGM YPAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL
Sequences:
>Translated_225_residues MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGG NSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGM YPAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL >Mature_224_residues SYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSRGLRLKSPRHMGEDWNGNKGGN SDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPKSGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMY PAHLHVELHYNPDVNCGHQGIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24997; Mature: 24866
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSR CHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCC GLRLKSPRHMGEDWNGNKGGNSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPK CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEEEHHCCCC SGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMYPAHLHVELHYNPDVNCGHQ CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCC GIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL CCCCCCCHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCC >Mature Secondary Structure SYFRFLLLALVFLTGSALISESAPVYMARRDSKFALVPLCDGFDFPVGKPDGNGYYRSR HHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCC GLRLKSPRHMGEDWNGNKGGNSDLGDPVYSVGHGVVTYAADARGAWGKVVIVRHAFREPK CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEEEHHCCCC SGKVLCCQTLYSHLNDINVVLGQLVLRGTQVGTIGTNRGMYPAHLHVELHYNPDVNCGHQ CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCC GIPKTERNYGRLTDFITRFRRLPLEKRMVRVPIGGFLPYKGTEGL CCCCCCCHHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA