Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734894

Identifier: 187734894

GI number: 187734894

Start: 462976

End: 464607

Strand: Reverse

Name: 187734894

Synonym: Amuc_0386

Alternate gene names: NA

Gene position: 464607-462976 (Counterclockwise)

Preceding gene: 187734895

Following gene: 187734893

Centisome position: 17.44

GC content: 57.78

Gene sequence:

>1632_bases
ATGGAAAATTCTAATCATTTGACGGAATCATGGAGCCTGCCGTGGCAGTCCGTCCTGTCCAGCCAGCTTTGGAGGCTGGA
ACACCTGTACTGGATAGAAAATAAAGCCGGTCAGCTCCAGCGTTTTTCCCTGAACAGGGCGCAGCGGCGGCTGCATGAGC
GGCTGTGGTACAGGAATGACATCCTGAAGGCGCGCCAGTTGGGCATTTCTACGTATGTGGCCATGCTGATGCTGGATATG
AGCCTGTTCCGGTCCAATTTCCATTGCGGAATCATTGATAAAAGCCTGCCGGACGCCCAGCAGAAACTGGCCAAGCTGCA
TTTTGCCTGGGACCATCTGGATTACGTGCCGCCCAACCCCTCTGCGATGGATGTGGCCCTGGCCCGGCTGGGAGAGAGAA
TCAAGAGCCTGTCCGGCGTGGAAAAAAAGGGGGAATGGCAACCCCGTACGTTGGCGCGCAGCCGCCTGGCTTTCTCCAAT
GGGAGCGATGTGCGGGTGGGGACTAATCTGCGAGGGGGAACCATGCAGTTTCTCCATGTTTCCGAGCTGGCGTATGTTTC
CGTGCATGCTCCGTGGAGAGCCAGGGAAATCCGTACGGGGGCAATCAATACAGTTCCCCCCGGAGGTTTTATTCTGAAGG
AAAGCACTCATGAGGGCGGACGGTACGGAGTGAATTATGAACTGACGCGCCAGGCCATGGAAAACATGGGCAAAAGCGAG
CTTTCCCCCTTGGATTTCAGATTCTTTTTTTTCAGCTGGTTTGACCAGGATGAGTACACTTTGCCGGGGCGCGGCAGATG
GAGCAGGGAACTGGATGAGTATTTCCTTTCTCTGGAACGGGAGACCGGAGTGGTTCTGGATGCGGGGCAGAAGAGATGGT
ATGCCCGGATGGCCCGGGTGATGGGCGCCTCCATGAAGCAGGAGTATCCGGGAACGCCGCAGGAGGCTTTTGCTACAGGG
GAAGAAGGCAGTATTTACGGCAGCCGTATCATGGCCCTGCGGGAGCGGGGGCAGGTAGGGGTGGAGTTTGAGGCTGATCC
GGACGCTCCCACTTTCACGGCATGGGATCTGGGGCTGAGTGACCATACGGCCATTTGGCTTGTGCAGATCATGGGAGACA
GTTTCCACTGGCTGGACCATTATGCCGCCAGCCAGCAGCCCCTGGCCCATTACGTTGAAAAAATGAAGGACTGGGAGAAA
AATCATGGTGTTGCGGTAACATTCCATCTTTTGCCTCATGATGCTGCACGGAGGGATGCGCACGGCATTTCCTATGTGGA
GAATATGGGGAGGCTGGGATTGGTGAATGTGCGCGTCGTCCCCAGAACCACGGATGTCTGGCGTGGCATTAATACGCTGA
GGGAATTGCTGGAGCGCAGTTTTTTCCATGCCCGCACCCAGGAAAAGGCGCGAGGCTTCTGTGGGGAAGAGGAGCCGGGA
GGCGTGGAGCATCTGGAGTTGTACAGGTCCAGGCCTCCCGGCGTAGGCGGAGCCATTGCGGAAAGCCCCGTGCATGACGG
GCATTCCCATACGGCGGATGCCGCACGAACCTTTGCGGAGGCTTGGTCCCATGGCCTGCTCCACGGAACCGGGAACGGCC
GGGAGCGCGGCAGGCGCGCCCGGATGTGGTAA

Upstream 100 bases:

>100_bases
AACGATCCACTGGCATACCGCCTTCCCCTGGACAAGGGGACGGAGGCCCAGAAGGGGATGACCAGGGAAGGAGCCCTGTT
GAAAGAATTAATAGAGGAGT

Downstream 100 bases:

>100_bases
CAGAGGGCAGGAGTAAAGGAAAAGAGATTTTTTTGATTGATAGTTGACAGTTTTGTCAAAAAGCGGTTCTTTTTTCCGGC
CTCCAGCTGTCTAACGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Terminase Large Subunit Protein; Large Subunit Terminase; Phage Terminase Large Subunit PBSX; Bacteriophage Terminase Large Subunit; PBSX Family Phage Terminase Large Subunit; Phage Terminase Large Subunit Pbsx; Terminase Large Subunit; DNA Packaging Protein GP; DNA Packaging Protein Gp

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MENSNHLTESWSLPWQSVLSSQLWRLEHLYWIENKAGQLQRFSLNRAQRRLHERLWYRNDILKARQLGISTYVAMLMLDM
SLFRSNFHCGIIDKSLPDAQQKLAKLHFAWDHLDYVPPNPSAMDVALARLGERIKSLSGVEKKGEWQPRTLARSRLAFSN
GSDVRVGTNLRGGTMQFLHVSELAYVSVHAPWRAREIRTGAINTVPPGGFILKESTHEGGRYGVNYELTRQAMENMGKSE
LSPLDFRFFFFSWFDQDEYTLPGRGRWSRELDEYFLSLERETGVVLDAGQKRWYARMARVMGASMKQEYPGTPQEAFATG
EEGSIYGSRIMALRERGQVGVEFEADPDAPTFTAWDLGLSDHTAIWLVQIMGDSFHWLDHYAASQQPLAHYVEKMKDWEK
NHGVAVTFHLLPHDAARRDAHGISYVENMGRLGLVNVRVVPRTTDVWRGINTLRELLERSFFHARTQEKARGFCGEEEPG
GVEHLELYRSRPPGVGGAIAESPVHDGHSHTADAARTFAEAWSHGLLHGTGNGRERGRRARMW

Sequences:

>Translated_543_residues
MENSNHLTESWSLPWQSVLSSQLWRLEHLYWIENKAGQLQRFSLNRAQRRLHERLWYRNDILKARQLGISTYVAMLMLDM
SLFRSNFHCGIIDKSLPDAQQKLAKLHFAWDHLDYVPPNPSAMDVALARLGERIKSLSGVEKKGEWQPRTLARSRLAFSN
GSDVRVGTNLRGGTMQFLHVSELAYVSVHAPWRAREIRTGAINTVPPGGFILKESTHEGGRYGVNYELTRQAMENMGKSE
LSPLDFRFFFFSWFDQDEYTLPGRGRWSRELDEYFLSLERETGVVLDAGQKRWYARMARVMGASMKQEYPGTPQEAFATG
EEGSIYGSRIMALRERGQVGVEFEADPDAPTFTAWDLGLSDHTAIWLVQIMGDSFHWLDHYAASQQPLAHYVEKMKDWEK
NHGVAVTFHLLPHDAARRDAHGISYVENMGRLGLVNVRVVPRTTDVWRGINTLRELLERSFFHARTQEKARGFCGEEEPG
GVEHLELYRSRPPGVGGAIAESPVHDGHSHTADAARTFAEAWSHGLLHGTGNGRERGRRARMW
>Mature_543_residues
MENSNHLTESWSLPWQSVLSSQLWRLEHLYWIENKAGQLQRFSLNRAQRRLHERLWYRNDILKARQLGISTYVAMLMLDM
SLFRSNFHCGIIDKSLPDAQQKLAKLHFAWDHLDYVPPNPSAMDVALARLGERIKSLSGVEKKGEWQPRTLARSRLAFSN
GSDVRVGTNLRGGTMQFLHVSELAYVSVHAPWRAREIRTGAINTVPPGGFILKESTHEGGRYGVNYELTRQAMENMGKSE
LSPLDFRFFFFSWFDQDEYTLPGRGRWSRELDEYFLSLERETGVVLDAGQKRWYARMARVMGASMKQEYPGTPQEAFATG
EEGSIYGSRIMALRERGQVGVEFEADPDAPTFTAWDLGLSDHTAIWLVQIMGDSFHWLDHYAASQQPLAHYVEKMKDWEK
NHGVAVTFHLLPHDAARRDAHGISYVENMGRLGLVNVRVVPRTTDVWRGINTLRELLERSFFHARTQEKARGFCGEEEPG
GVEHLELYRSRPPGVGGAIAESPVHDGHSHTADAARTFAEAWSHGLLHGTGNGRERGRRARMW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62001; Mature: 62001

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSNHLTESWSLPWQSVLSSQLWRLEHLYWIENKAGQLQRFSLNRAQRRLHERLWYRND
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILKARQLGISTYVAMLMLDMSLFRSNFHCGIIDKSLPDAQQKLAKLHFAWDHLDYVPPNP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SAMDVALARLGERIKSLSGVEKKGEWQPRTLARSRLAFSNGSDVRVGTNLRGGTMQFLHV
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE
SELAYVSVHAPWRAREIRTGAINTVPPGGFILKESTHEGGRYGVNYELTRQAMENMGKSE
CCEEEEEEECCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
LSPLDFRFFFFSWFDQDEYTLPGRGRWSRELDEYFLSLERETGVVLDAGQKRWYARMARV
CCCCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
MGASMKQEYPGTPQEAFATGEEGSIYGSRIMALRERGQVGVEFEADPDAPTFTAWDLGLS
HHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCC
DHTAIWLVQIMGDSFHWLDHYAASQQPLAHYVEKMKDWEKNHGVAVTFHLLPHDAARRDA
CCHHEEEEEHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHCC
HGISYVENMGRLGLVNVRVVPRTTDVWRGINTLRELLERSFFHARTQEKARGFCGEEEPG
CCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GVEHLELYRSRPPGVGGAIAESPVHDGHSHTADAARTFAEAWSHGLLHGTGNGRERGRRA
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHCCCC
RMW
CCC
>Mature Secondary Structure
MENSNHLTESWSLPWQSVLSSQLWRLEHLYWIENKAGQLQRFSLNRAQRRLHERLWYRND
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILKARQLGISTYVAMLMLDMSLFRSNFHCGIIDKSLPDAQQKLAKLHFAWDHLDYVPPNP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SAMDVALARLGERIKSLSGVEKKGEWQPRTLARSRLAFSNGSDVRVGTNLRGGTMQFLHV
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE
SELAYVSVHAPWRAREIRTGAINTVPPGGFILKESTHEGGRYGVNYELTRQAMENMGKSE
CCEEEEEEECCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
LSPLDFRFFFFSWFDQDEYTLPGRGRWSRELDEYFLSLERETGVVLDAGQKRWYARMARV
CCCCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
MGASMKQEYPGTPQEAFATGEEGSIYGSRIMALRERGQVGVEFEADPDAPTFTAWDLGLS
HHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCC
DHTAIWLVQIMGDSFHWLDHYAASQQPLAHYVEKMKDWEKNHGVAVTFHLLPHDAARRDA
CCHHEEEEEHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHCC
HGISYVENMGRLGLVNVRVVPRTTDVWRGINTLRELLERSFFHARTQEKARGFCGEEEPG
CCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GVEHLELYRSRPPGVGGAIAESPVHDGHSHTADAARTFAEAWSHGLLHGTGNGRERGRRA
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHCCCC
RMW
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA