| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734870
Identifier: 187734870
GI number: 187734870
Start: 427932
End: 428354
Strand: Direct
Name: 187734870
Synonym: Amuc_0362
Alternate gene names: NA
Gene position: 427932-428354 (Clockwise)
Preceding gene: 187734864
Following gene: 187734871
Centisome position: 16.06
GC content: 59.34
Gene sequence:
>423_bases ATGGATATTTTAGTTTCTACTCTTTGTGACTTCGCCGCCGACTACCAGGGCAAGCTCTGCATCCAGGGCGGCTTTGACTC CCTGGTCGCCCGCCAGTTCCCGGTCGTGCATCCCGTCTGCGCCGTTGCTCTGCGCATCTGCCTCACTCCTGAAGACGAAG GCACGCACGAACTGGGCCTGAGCATCGTTGATGCCGACGGCACGCCGCTGGACAAGGAACGCATGCCCATCAAGATCAAT TTCCCGGTTCCCGCTTTCCCGGAAGGAGCCTCTTTCTTCACCCGCAACCTGATCATGAACTTCCAGGGCCTGCGTTTTGA AAAACCGGGCAACTACTCCATCGACCTGACGGTTGACGGCGAACTCGCCTCCCGCGTACCCTTCCGCGTAGTGCAGGTGC AGGAAGAAGCCGCCCAGGCCTAA
Upstream 100 bases:
>100_bases TACAGCTTTATCTTGCAATAGCTCCGGAGGAAGTATAGTTCTGTCCAATGTTCATGCTTTCCGCGTGAAAGCTAGCCAAA TACATCAACATTATCACAAC
Downstream 100 bases:
>100_bases GAAACCATCCCCTCTTCCATCAAACCGCCTCCCGTTCATCCGGCAGGCGGTTTTTTATTGGAGCGGCCGTCCGCCCGGAA GTGCGGAACAGGCCGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDILVSTLCDFAADYQGKLCIQGGFDSLVARQFPVVHPVCAVALRICLTPEDEGTHELGLSIVDADGTPLDKERMPIKIN FPVPAFPEGASFFTRNLIMNFQGLRFEKPGNYSIDLTVDGELASRVPFRVVQVQEEAAQA
Sequences:
>Translated_140_residues MDILVSTLCDFAADYQGKLCIQGGFDSLVARQFPVVHPVCAVALRICLTPEDEGTHELGLSIVDADGTPLDKERMPIKIN FPVPAFPEGASFFTRNLIMNFQGLRFEKPGNYSIDLTVDGELASRVPFRVVQVQEEAAQA >Mature_140_residues MDILVSTLCDFAADYQGKLCIQGGFDSLVARQFPVVHPVCAVALRICLTPEDEGTHELGLSIVDADGTPLDKERMPIKIN FPVPAFPEGASFFTRNLIMNFQGLRFEKPGNYSIDLTVDGELASRVPFRVVQVQEEAAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15358; Mature: 15358
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILVSTLCDFAADYQGKLCIQGGFDSLVARQFPVVHPVCAVALRICLTPEDEGTHELGL CCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCC SIVDADGTPLDKERMPIKINFPVPAFPEGASFFTRNLIMNFQGLRFEKPGNYSIDLTVDG EEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEEEECC ELASRVPFRVVQVQEEAAQA CHHCCCCEEEEEEEHHHHCC >Mature Secondary Structure MDILVSTLCDFAADYQGKLCIQGGFDSLVARQFPVVHPVCAVALRICLTPEDEGTHELGL CCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCC SIVDADGTPLDKERMPIKINFPVPAFPEGASFFTRNLIMNFQGLRFEKPGNYSIDLTVDG EEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEEEECC ELASRVPFRVVQVQEEAAQA CHHCCCCEEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA