| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is bsoBIM [H]
Identifier: 187734834
GI number: 187734834
Start: 382474
End: 383769
Strand: Reverse
Name: bsoBIM [H]
Synonym: Amuc_0325
Alternate gene names: 187734834
Gene position: 383769-382474 (Counterclockwise)
Preceding gene: 187734835
Following gene: 187734833
Centisome position: 14.41
GC content: 34.03
Gene sequence:
>1296_bases ATGTACAAAGACTATAAATTCATAGATTGCACAGAAAAATACCATTCGGTTATGCAATTTGACAAAAACAAGAATGTTTT TGTACATCGTTGGTACCCTTTTGTGGAAGGATATTCTAAGGAGTTTATTGAAGACATACTAGGCGAATTACCTTTTGCGC CAACCTGTGCATTAGAGCCTTTCTGTGGTAGCGGAACAACTCCTGTTGAACTGCAAAACCACGGAATAAAGTGCTATTCT TTTGAGGTCAGTCCTTTTATGCATCTCCTATCAACGGTCAAATTGGGTAGAAAATATAATGTCGATACCTTTACGTATTA TGTTAAAGCCGTAACAAAGAAGCTGTCACGTACAAGTCGAAATATACGTAAAATAGAATCATTACCTTTTGGCGATACGA TTGTAAAAAAAGAGCAGAGTAAGAAGTGGAATTTTCACGACACTGCTATAGATGGAATACTTGATGTAAGACATGCCATT AGAACGATTGTTGATAATGATGATTATAAGAATTTATTTACAATCGCATTGGCTTCGATTATCATTCAAGCAAGCAATAT GTTTCGTAATGGCAAGTGCTTGTCGTACAAGAAAGGATGGGAAACTAGAATCTTTAGTAGAAAAGATATTCATAATTTTT TTCTGGACAGATTAAATTCAATTTTTACAGAAGATATTAGAATCATTTCCAAACAGAATCCATCTGTACAAAATTCTGAG ATATGCTATTTGGGAGATGTTCGGAAAAACATACAACAGGTTCCAGATAGAGAAGTGGATTTGATTATTACTTCTCCACC CTATCTAAACTCCAGAGATTACACGGATATTTATATGTTAGAGCTAAAAGTTTTACAATTAATTAACTCTTATGAGGAAC TTCGTGAATTACGTAAAAACACATTACGTTCTCATGTTCAAGTTCCATATGGAAAAGTCTTTCCGATAGCAAATGAAAGA CTTAAGAATAGCCTTCTAGAGATGTCTAATAAAGAGTTAAATACATGGAATACAGATATTACAAATATGATATGTGCCTA TTTTGAGGATATGCAATTTTTATTCTCGGAATTTGCAAAGAAAATGCATAAAGGGGGTGTCATATATTTCAATGTGGCTA ATTCTGCTTACTATGGAGTTGAAGTTCCTGTTGATTATATCATTGCTGACATAGCAGAATCTTGTGGATTTAAGGTTCGC GAAATAAGAAAAGCGAGGGATTTAAAAACCAGCCCACAGCAAAGTGATAAAATCGGCAAACTAAGAGAAAGTGTAATTGT GATTGATTACCAGTGA
Upstream 100 bases:
>100_bases GATCAAATACCTAAGAAAGATAGACCAGCTTATTACAGACACATTAAATTAGATGATTTTAGAGTAATAAATGAACATCC CAACTGAATAATTAACAACT
Downstream 100 bases:
>100_bases TTTACTTCCAGATCTAGTTTGAATATAAATTTGGAAGTAAAGTTAATGATATTGGTCTCATTAGTGGGAGCTTTTAGAGC TGGATGATAGGCTTGAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: M.BsoBI; N(4)- cytosine-specific methyltransferase BsoBI [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MYKDYKFIDCTEKYHSVMQFDKNKNVFVHRWYPFVEGYSKEFIEDILGELPFAPTCALEPFCGSGTTPVELQNHGIKCYS FEVSPFMHLLSTVKLGRKYNVDTFTYYVKAVTKKLSRTSRNIRKIESLPFGDTIVKKEQSKKWNFHDTAIDGILDVRHAI RTIVDNDDYKNLFTIALASIIIQASNMFRNGKCLSYKKGWETRIFSRKDIHNFFLDRLNSIFTEDIRIISKQNPSVQNSE ICYLGDVRKNIQQVPDREVDLIITSPPYLNSRDYTDIYMLELKVLQLINSYEELRELRKNTLRSHVQVPYGKVFPIANER LKNSLLEMSNKELNTWNTDITNMICAYFEDMQFLFSEFAKKMHKGGVIYFNVANSAYYGVEVPVDYIIADIAESCGFKVR EIRKARDLKTSPQQSDKIGKLRESVIVIDYQ
Sequences:
>Translated_431_residues MYKDYKFIDCTEKYHSVMQFDKNKNVFVHRWYPFVEGYSKEFIEDILGELPFAPTCALEPFCGSGTTPVELQNHGIKCYS FEVSPFMHLLSTVKLGRKYNVDTFTYYVKAVTKKLSRTSRNIRKIESLPFGDTIVKKEQSKKWNFHDTAIDGILDVRHAI RTIVDNDDYKNLFTIALASIIIQASNMFRNGKCLSYKKGWETRIFSRKDIHNFFLDRLNSIFTEDIRIISKQNPSVQNSE ICYLGDVRKNIQQVPDREVDLIITSPPYLNSRDYTDIYMLELKVLQLINSYEELRELRKNTLRSHVQVPYGKVFPIANER LKNSLLEMSNKELNTWNTDITNMICAYFEDMQFLFSEFAKKMHKGGVIYFNVANSAYYGVEVPVDYIIADIAESCGFKVR EIRKARDLKTSPQQSDKIGKLRESVIVIDYQ >Mature_431_residues MYKDYKFIDCTEKYHSVMQFDKNKNVFVHRWYPFVEGYSKEFIEDILGELPFAPTCALEPFCGSGTTPVELQNHGIKCYS FEVSPFMHLLSTVKLGRKYNVDTFTYYVKAVTKKLSRTSRNIRKIESLPFGDTIVKKEQSKKWNFHDTAIDGILDVRHAI RTIVDNDDYKNLFTIALASIIIQASNMFRNGKCLSYKKGWETRIFSRKDIHNFFLDRLNSIFTEDIRIISKQNPSVQNSE ICYLGDVRKNIQQVPDREVDLIITSPPYLNSRDYTDIYMLELKVLQLINSYEELRELRKNTLRSHVQVPYGKVFPIANER LKNSLLEMSNKELNTWNTDITNMICAYFEDMQFLFSEFAKKMHKGGVIYFNVANSAYYGVEVPVDYIIADIAESCGFKVR EIRKARDLKTSPQQSDKIGKLRESVIVIDYQ
Specific function: This methylase recognizes the double-stranded sequence CYCGRG, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the BsoBI endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 50321; Mature: 50321
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKDYKFIDCTEKYHSVMQFDKNKNVFVHRWYPFVEGYSKEFIEDILGELPFAPTCALEP CCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCC FCGSGTTPVELQNHGIKCYSFEVSPFMHLLSTVKLGRKYNVDTFTYYVKAVTKKLSRTSR CCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH NIRKIESLPFGDTIVKKEQSKKWNFHDTAIDGILDVRHAIRTIVDNDDYKNLFTIALASI HHHHHHCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IIQASNMFRNGKCLSYKKGWETRIFSRKDIHNFFLDRLNSIFTEDIRIISKQNPSVQNSE HHHHHHHHCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ICYLGDVRKNIQQVPDREVDLIITSPPYLNSRDYTDIYMLELKVLQLINSYEELRELRKN EEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLRSHVQVPYGKVFPIANERLKNSLLEMSNKELNTWNTDITNMICAYFEDMQFLFSEFAK HHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KMHKGGVIYFNVANSAYYGVEVPVDYIIADIAESCGFKVREIRKARDLKTSPQQSDKIGK HHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH LRESVIVIDYQ HHCCEEEEEEC >Mature Secondary Structure MYKDYKFIDCTEKYHSVMQFDKNKNVFVHRWYPFVEGYSKEFIEDILGELPFAPTCALEP CCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCC FCGSGTTPVELQNHGIKCYSFEVSPFMHLLSTVKLGRKYNVDTFTYYVKAVTKKLSRTSR CCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH NIRKIESLPFGDTIVKKEQSKKWNFHDTAIDGILDVRHAIRTIVDNDDYKNLFTIALASI HHHHHHCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IIQASNMFRNGKCLSYKKGWETRIFSRKDIHNFFLDRLNSIFTEDIRIISKQNPSVQNSE HHHHHHHHCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ICYLGDVRKNIQQVPDREVDLIITSPPYLNSRDYTDIYMLELKVLQLINSYEELRELRKN EEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLRSHVQVPYGKVFPIANERLKNSLLEMSNKELNTWNTDITNMICAYFEDMQFLFSEFAK HHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KMHKGGVIYFNVANSAYYGVEVPVDYIIADIAESCGFKVREIRKARDLKTSPQQSDKIGK HHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH LRESVIVIDYQ HHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8917312 [H]