| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734829
Identifier: 187734829
GI number: 187734829
Start: 374898
End: 375989
Strand: Direct
Name: 187734829
Synonym: Amuc_0318
Alternate gene names: NA
Gene position: 374898-375989 (Clockwise)
Preceding gene: 187734828
Following gene: 187734830
Centisome position: 14.07
GC content: 56.68
Gene sequence:
>1092_bases ATGAAGATCCTTGACAGATACATTGCCCGCCAGCTGCTGGGTGTCACGGCCCTGGGGGTAATGGCCCTGAGCGCCCTGCT CCTTCTGGGCAACCTGTTCAAGGAACTGCGTCCCCTCCTGGTGGAAAACAAGGCTCCCATCAGCATCGTTCTGGAATTCA TCTTCCAGGTCATCCCCTTTTCGCTGATGTTCTCCATTCCGTGGGGGTTCCTGACGGCCGTTCTTCTGGTGTACGGCCGT CTGGCCTCGGACAACGAACTCACCTCCATGCGCATGTCCGGCATGAGCCTGTGGCGTCTGAGCGCCCCCGCCATCGCCAT CGGCATCGCCCTTTCCGGCCTTTGCTACTGGATTAACATAGACATCGCACCGCGCGCCAAGCAATCCATTTCCGAGTTGC TCATCAAAGCCGCATCCATCAACCCGAAGGGGCTTCTCAATGAAGGCCAGGCCATTACCAAATTCGACAACCTGGAAATC TACATCGACAAACGCGTGGACGACGTCATCCACGGCATGCATATCTACCAGAAAGCGGACGACAAATCCCCGTCTGTGGC CATGCACTCGGAACGCGTGACCATGGATTTCTCCCCCGAGAAAAAAATCCTCACCCTGCATCTCATCAATCCCCTCATCA CCACGCAGGAAGAAGGTTCCATCTCCCAAAGCGTGACCATGGACGAGATGCCTCTGAGCATCAACTTGGACAAATCCCGC TCCCGGCGCATCAAGGCCAACCGCTTCACCAACCGGGAAATCCGGGAAGCTCTGGACACGCCCGGCTATCTGGATAAAAA GCAGACCACGGAATTCGCCACGGAACTGCCCAGGCGCGCCTCCTTCTCCCTGGCCTGCATCGTCTTTGCCCTCATCGGCG TGCCACTGGCCATCAACACCCGCAGAAAAGACACCTCCACAGGATTTGCCCTGGGCATCCTGATCGCCTCACTCTACTTT CTGGCCCTGATCTTTGCAGACTTGTCCCGGAAAAACGACACGATGCTCCCCTATATTCTGCTGTGGCTTCCCAACATCAT CACGGTTGCCGTGGCGTTGCACCTTCACAAACGGGCCAAGCACAAAGGATAA
Upstream 100 bases:
>100_bases CTCAACACTTCCTTCCTCCGGGACGGGATGCGCATTGTTCCGTGCGCGAGATTGACTTGTCCGCAGCCTTCGGGCAGAAT ATCCGGCACGGTTTTACTGC
Downstream 100 bases:
>100_bases GCCCCCGGCGGAAGCCCTTCCCGCTGGCGTGGAATTAGCTTTCACAGCATGGGAGCTTCGGGTAACATGACGTGCATGCA GCACGTCCCCACCATCGCCA
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Permease; Permease Family Protein; Transporter YjgP/YjgQ; YjgP/YjgQ Permease; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Family Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPFSLMFSIPWGFLTAVLLVYGR LASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINIDIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEI YIDKRVDDVIHGMHIYQKADDKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAINTRRKDTSTGFALGILIASLYF LALIFADLSRKNDTMLPYILLWLPNIITVAVALHLHKRAKHKG
Sequences:
>Translated_363_residues MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPFSLMFSIPWGFLTAVLLVYGR LASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINIDIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEI YIDKRVDDVIHGMHIYQKADDKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAINTRRKDTSTGFALGILIASLYF LALIFADLSRKNDTMLPYILLWLPNIITVAVALHLHKRAKHKG >Mature_363_residues MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPFSLMFSIPWGFLTAVLLVYGR LASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINIDIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEI YIDKRVDDVIHGMHIYQKADDKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAINTRRKDTSTGFALGILIASLYF LALIFADLSRKNDTMLPYILLWLPNIITVAVALHLHKRAKHKG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40561; Mature: 40561
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SLMFSIPWGFLTAVLLVYGRLASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINI HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHEECCCCHHHHHHHHHCEEEEEEE DIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEIYIDKRVDDVIHGMHIYQKAD ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHCC DKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR CCCCCEEEECCEEEEECCCCCCEEEEEECCHHHCCCCCCCCHHCCCCCCCCEEEECCCHH SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAINT HCCCHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEC RRKDTSTGFALGILIASLYFLALIFADLSRKNDTMLPYILLWLPNIITVAVALHLHKRAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC HKG CCC >Mature Secondary Structure MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SLMFSIPWGFLTAVLLVYGRLASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINI HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHEECCCCHHHHHHHHHCEEEEEEE DIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEIYIDKRVDDVIHGMHIYQKAD ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHCC DKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR CCCCCEEEECCEEEEECCCCCCEEEEEECCHHHCCCCCCCCHHCCCCCCCCEEEECCCHH SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAINT HCCCHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEC RRKDTSTGFALGILIASLYFLALIFADLSRKNDTMLPYILLWLPNIITVAVALHLHKRAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC HKG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA