| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734810
Identifier: 187734810
GI number: 187734810
Start: 357230
End: 357940
Strand: Reverse
Name: 187734810
Synonym: Amuc_0299
Alternate gene names: NA
Gene position: 357940-357230 (Counterclockwise)
Preceding gene: 187734811
Following gene: 187734809
Centisome position: 13.44
GC content: 59.49
Gene sequence:
>711_bases ATGTCGAATTCTTCTTCCATCCTTGCATACTCTCTTACCACCCTGGTAGGGCTGGGCGGGGCGTTGCAGGGAGCGGAAGA GGATACGGCGGCACTGACGCGCAGAATCGAGCGCCTCGAAAAGCAGAATGCGGCCCTCAAGGCATCCTATGTCCAGGCCC GCAGCGACGCCGACAAGGCGGCCGCACAGCTGGTGGACATCCGTTCCAGGCTGGAAGCTTTGGGGGGCGCTGCGCTAGGT AACAGCGAGGAACGCCTGATTCAGGCGATGGCGGACATCGAAGCTTTTAATGACCGCGTCCAGCGGCTGGAGCAGGCATC CGTCAAGCTCTCCGGAGCCATCCTTGCCTACATGAAACAAGCCATATCCGAAGATGCGAATGCCAGGACGGCTGTGGAGA GTTCTCTGCGCCTGCTGGAATCCGTTCTGGGATACAGGCAACAGCCCGTGCGAGATGGCGCGGGAACCCTGGCGGAAGCC AAGGTGCTCAGCATTGATTCCGAATCCGGAGTGGTGGTGCTGAATACCGGCAGAACGGCAGGAATGCAAGTCGGGATGCC GGTTCGGTTAACCCGGGGAGCTCAAACCATCGGAGAAGCCGTAGTCACGGACGTCCGCAAGGAAGTATGTGGCGCGCTTG TTCAGAAACTTGAGACGCCAGCCGATCCGGTGCGCGTCGGAGATTCTGCCTCAGTAAAAACCAACGACTAA
Upstream 100 bases:
>100_bases AAAACATGGTAGGCCACAAGCTTGGTGAATTTGCCCCGACTCGTGTCTTCAAACAGCACGGCGGTATCGGTAAGAAGTAA TCAGTAAGTTAACAATCAAC
Downstream 100 bases:
>100_bases ATCATCTTCATAATAACCTGCACTACGAGGAAAAACCCATGGAAGTGAAAGCTGTTTACAAATACGCCCGCATCTCCGCC AAGAAGATGCGCGATGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSNSSSILAYSLTTLVGLGGALQGAEEDTAALTRRIERLEKQNAALKASYVQARSDADKAAAQLVDIRSRLEALGGAALG NSEERLIQAMADIEAFNDRVQRLEQASVKLSGAILAYMKQAISEDANARTAVESSLRLLESVLGYRQQPVRDGAGTLAEA KVLSIDSESGVVVLNTGRTAGMQVGMPVRLTRGAQTIGEAVVTDVRKEVCGALVQKLETPADPVRVGDSASVKTND
Sequences:
>Translated_236_residues MSNSSSILAYSLTTLVGLGGALQGAEEDTAALTRRIERLEKQNAALKASYVQARSDADKAAAQLVDIRSRLEALGGAALG NSEERLIQAMADIEAFNDRVQRLEQASVKLSGAILAYMKQAISEDANARTAVESSLRLLESVLGYRQQPVRDGAGTLAEA KVLSIDSESGVVVLNTGRTAGMQVGMPVRLTRGAQTIGEAVVTDVRKEVCGALVQKLETPADPVRVGDSASVKTND >Mature_235_residues SNSSSILAYSLTTLVGLGGALQGAEEDTAALTRRIERLEKQNAALKASYVQARSDADKAAAQLVDIRSRLEALGGAALGN SEERLIQAMADIEAFNDRVQRLEQASVKLSGAILAYMKQAISEDANARTAVESSLRLLESVLGYRQQPVRDGAGTLAEAK VLSIDSESGVVVLNTGRTAGMQVGMPVRLTRGAQTIGEAVVTDVRKEVCGALVQKLETPADPVRVGDSASVKTND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24855; Mature: 24724
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSSSILAYSLTTLVGLGGALQGAEEDTAALTRRIERLEKQNAALKASYVQARSDADKA CCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQLVDIRSRLEALGGAALGNSEERLIQAMADIEAFNDRVQRLEQASVKLSGAILAYMKQ HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISEDANARTAVESSLRLLESVLGYRQQPVRDGAGTLAEAKVLSIDSESGVVVLNTGRTA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCEEEEECCCCC GMQVGMPVRLTRGAQTIGEAVVTDVRKEVCGALVQKLETPADPVRVGDSASVKTND CEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC >Mature Secondary Structure SNSSSILAYSLTTLVGLGGALQGAEEDTAALTRRIERLEKQNAALKASYVQARSDADKA CCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQLVDIRSRLEALGGAALGNSEERLIQAMADIEAFNDRVQRLEQASVKLSGAILAYMKQ HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISEDANARTAVESSLRLLESVLGYRQQPVRDGAGTLAEAKVLSIDSESGVVVLNTGRTA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCEEEEECCCCC GMQVGMPVRLTRGAQTIGEAVVTDVRKEVCGALVQKLETPADPVRVGDSASVKTND CEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA