| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is rpmC [H]
Identifier: 187734806
GI number: 187734806
Start: 355431
End: 355634
Strand: Reverse
Name: rpmC [H]
Synonym: Amuc_0295
Alternate gene names: 187734806
Gene position: 355634-355431 (Counterclockwise)
Preceding gene: 187734807
Following gene: 187734805
Centisome position: 13.35
GC content: 55.88
Gene sequence:
>204_bases ATGTCCGATAAGAACTCCGCCAAAGAACTTCGTGCTATGTCCGCCAAGGAGCTTTCCGCTCTGGTGCGCAGCCTTCGTGA AGAACTTTTCAATCTCCGCCTCCAGCAGGCCACCGGCCAGCTGGAAAACAACCAGAGAATTCGCACCGTCCGCAAGGACC TTGCCCGCGCCCTTACCATTAAGGGTGAAACCGGGGAGGTTTAA
Upstream 100 bases:
>100_bases CCCAGGCGCGTGAAGCCCTTCGACTGGCTTCCAACAAGCTGGGCGTATCCACCCGCTTCGTCTATCGTCAAGGCGTTCAA CACTAAAGCTACTCATCACC
Downstream 100 bases:
>100_bases TTGAGGATTTCCGGTAATTACAGAATATTCTAACACTTTTAGAATCCAATGTCCGAACAAACCGAAACAACCAAGAAGCC CGGCCTTCGCAAGACGCGCG
Product: ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSDKNSAKELRAMSAKELSALVRSLREELFNLRLQQATGQLENNQRIRTVRKDLARALTIKGETGEV
Sequences:
>Translated_67_residues MSDKNSAKELRAMSAKELSALVRSLREELFNLRLQQATGQLENNQRIRTVRKDLARALTIKGETGEV >Mature_66_residues SDKNSAKELRAMSAKELSALVRSLREELFNLRLQQATGQLENNQRIRTVRKDLARALTIKGETGEV
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 - InterPro: IPR018254 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 7585; Mature: 7454
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKNSAKELRAMSAKELSALVRSLREELFNLRLQQATGQLENNQRIRTVRKDLARALTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KGETGEV CCCCCCC >Mature Secondary Structure SDKNSAKELRAMSAKELSALVRSLREELFNLRLQQATGQLENNQRIRTVRKDLARALTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KGETGEV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA