| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734799
Identifier: 187734799
GI number: 187734799
Start: 345123
End: 345848
Strand: Reverse
Name: 187734799
Synonym: Amuc_0288
Alternate gene names: NA
Gene position: 345848-345123 (Counterclockwise)
Preceding gene: 187734804
Following gene: 187734798
Centisome position: 12.98
GC content: 61.57
Gene sequence:
>726_bases ATGCATGATTGCCGTTTATTGAGAGGAGTGCTCCGTTCCTCCCGTCCGGCCAATATTCCCACGCTGTTTACCAACGCGGC GGCGGCGTGGGCTTCCGTCCGTGGGGCGGAGCTGCCGCCTCCCGCCCTGTATGGGGGCGTAGTGCTGATGGGGCTGTGCT TTTATTTGTATGGCATGTGGGAGAATGACCGTGTGGACGCCAGGTGGGATGCCGCCCGTTATCCGGACCGCCCCGTGCCG TGCGGCGCGGTGAGCGTTTCCGTACTGAGGCTGTTGTCTTTGGCGGCCGGGTTGTCCGGCCTGGTGCTGAACATGGCGCT GGGCGGGGAATTTGCCGTGGGGGCTTTGCTGCTGATTGTGATTTCCCTGTATAATGTGTTCCATAAACTGTGGAGCGGCT CCATTGTTTTGATGGGGTTGTGCCGCGGGGTGTGGGTGCTGGCCGCCGGCCTGGCATTTGCCCGTTCGGGTGGAGAGTCC GTTCCTCCTCCGGCCTTGCTGTGGTATGCTTTCGGCCTGTTTTTGTTTACCTGCGTGATTTCCGCCGTAGCACGGCGTGA GGCGGGCAGGCCCCGGGTTCAAAGGGCTGTGACGGTGCTGCTTTCCGGCATGTGCCTGTTTGATGCGGTATGGCTCCTGA GTTTCGGTTCCTTGCTGTGGCTTGGTTCCGTCTTATTATGGGCGGGAACGCGGCTGCTGCAGAAGCTCGGCTGCCGGGCC ACATAG
Upstream 100 bases:
>100_bases TATGGATGCTGCCCGGCATGGGCGGGATGCCGGTTCCTGCACTTTTGCTGACTGTGGATGTGCTTGGTCATCGCCGTTTT TCCCTGTACAGTATGCGGCG
Downstream 100 bases:
>100_bases GTTTGAGTTGAATTTACATGGGAAGTGTGCATGATCTAACGCGAGAAAGAGGGTTATGAATGAATTGATCATCAAGATAG GTCCGTTGTTCTGGGTTTTG
Product: UbiA prenyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MHDCRLLRGVLRSSRPANIPTLFTNAAAAWASVRGAELPPPALYGGVVLMGLCFYLYGMWENDRVDARWDAARYPDRPVP CGAVSVSVLRLLSLAAGLSGLVLNMALGGEFAVGALLLIVISLYNVFHKLWSGSIVLMGLCRGVWVLAAGLAFARSGGES VPPPALLWYAFGLFLFTCVISAVARREAGRPRVQRAVTVLLSGMCLFDAVWLLSFGSLLWLGSVLLWAGTRLLQKLGCRA T
Sequences:
>Translated_241_residues MHDCRLLRGVLRSSRPANIPTLFTNAAAAWASVRGAELPPPALYGGVVLMGLCFYLYGMWENDRVDARWDAARYPDRPVP CGAVSVSVLRLLSLAAGLSGLVLNMALGGEFAVGALLLIVISLYNVFHKLWSGSIVLMGLCRGVWVLAAGLAFARSGGES VPPPALLWYAFGLFLFTCVISAVARREAGRPRVQRAVTVLLSGMCLFDAVWLLSFGSLLWLGSVLLWAGTRLLQKLGCRA T >Mature_241_residues MHDCRLLRGVLRSSRPANIPTLFTNAAAAWASVRGAELPPPALYGGVVLMGLCFYLYGMWENDRVDARWDAARYPDRPVP CGAVSVSVLRLLSLAAGLSGLVLNMALGGEFAVGALLLIVISLYNVFHKLWSGSIVLMGLCRGVWVLAAGLAFARSGGES VPPPALLWYAFGLFLFTCVISAVARREAGRPRVQRAVTVLLSGMCLFDAVWLLSFGSLLWLGSVLLWAGTRLLQKLGCRA T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25937; Mature: 25937
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDCRLLRGVLRSSRPANIPTLFTNAAAAWASVRGAELPPPALYGGVVLMGLCFYLYGMW CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ENDRVDARWDAARYPDRPVPCGAVSVSVLRLLSLAAGLSGLVLNMALGGEFAVGALLLIV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISLYNVFHKLWSGSIVLMGLCRGVWVLAAGLAFARSGGESVPPPALLWYAFGLFLFTCVI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SAVARREAGRPRVQRAVTVLLSGMCLFDAVWLLSFGSLLWLGSVLLWAGTRLLQKLGCRA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T C >Mature Secondary Structure MHDCRLLRGVLRSSRPANIPTLFTNAAAAWASVRGAELPPPALYGGVVLMGLCFYLYGMW CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ENDRVDARWDAARYPDRPVPCGAVSVSVLRLLSLAAGLSGLVLNMALGGEFAVGALLLIV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISLYNVFHKLWSGSIVLMGLCRGVWVLAAGLAFARSGGESVPPPALLWYAFGLFLFTCVI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SAVARREAGRPRVQRAVTVLLSGMCLFDAVWLLSFGSLLWLGSVLLWAGTRLLQKLGCRA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA