Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734785

Identifier: 187734785

GI number: 187734785

Start: 335338

End: 336189

Strand: Reverse

Name: 187734785

Synonym: Amuc_0274

Alternate gene names: NA

Gene position: 336189-335338 (Counterclockwise)

Preceding gene: 187734786

Following gene: 187734784

Centisome position: 12.62

GC content: 56.81

Gene sequence:

>852_bases
ATGTTTATCTTGTCATGTTCCGCAGCGCTGGCGTTCGGTCTGTTCCCGTTTGCGGCAGGGCAATCCGTGGCTTCCGGTGA
CCGCGGGAAAATGGAAACTGTCCCCAGGCCCGGACTGGAATGCCTTCAGGTGACTTTGCTCATCCGCCAAATGGTTTTGG
ACCGCTATGACAGCACGAGTACGGGAATTTTGTCCGAACAGGACAAGGCCCGGTTGGTGGAGGATGCCCGCTCTGCGCGG
AGGGAGGCCAGAAAAGCCTTCCTGAGGAAGTTTGATAAGGATGGGGACGGAAGGCTTTCCCCGGAAGAGTGCAGGGCTTT
CCGGGAACATGTAGAGAAGCGGCGCGGGGTGCGCAGGCCGGATGCCGGGCCGGACAAGAGAGACGGAATTCCGTTTTACC
CTCCCGCCGAGAGGAAGGAAATTCCTCCGCTCCCCCCTCCGGCAGAGGGGGTGGAAATGCCCATGGTGGAAATTCGCACG
GTGGGACGGAAGCGCTTCATGGTTGCTCCCGGATTGTTTCTGCTGACTCGTAACATGTTGCTGCAGAATTATGATGCCAA
CGGGAACGGCCGCATTGATCCGGAGGAACATGCCGTTGTCATGAAAGATGCCGCGGCTCTGTACCAGGCCAAAATGAAGG
AAATGATGGAGCTTTACGATTTGGACCAGGACGGTGTGCTCAGCCCGGTGGAGAGAGAGCAGGCTCTGGCGGACAGCCAT
AAAGACAGCCCTTTGTATGCCATGGAAGAACCGGACGATATTGATTTGTTCATCCGGGCCAATATTAGTGAAGTGCTGCT
GAAGGAGTCGCCGGTGGATGCCGGGGATGACAAGGATAAAGGTACGGAGTAA

Upstream 100 bases:

>100_bases
CTGCATCCGCCCGTGTCGCCCGCCGGCAGGGGCGGATGTTTATTTTTGAAACCGTCTTTTTCCGGCGGGGTTAGTAAAAG
TGGTTATGAGATTGCTCCAC

Downstream 100 bases:

>100_bases
TTTATTCTTCATGATGAGGATTCCTCTGGAACCGGAACAGGACTTTCTTCAATATCTGGAGGTGGAAAAGCAGGCTTCTC
CTCATACGGTGGAGGTGTAC

Product: signal transduction protein with EFhand domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MFILSCSAALAFGLFPFAAGQSVASGDRGKMETVPRPGLECLQVTLLIRQMVLDRYDSTSTGILSEQDKARLVEDARSAR
REARKAFLRKFDKDGDGRLSPEECRAFREHVEKRRGVRRPDAGPDKRDGIPFYPPAERKEIPPLPPPAEGVEMPMVEIRT
VGRKRFMVAPGLFLLTRNMLLQNYDANGNGRIDPEEHAVVMKDAAALYQAKMKEMMELYDLDQDGVLSPVEREQALADSH
KDSPLYAMEEPDDIDLFIRANISEVLLKESPVDAGDDKDKGTE

Sequences:

>Translated_283_residues
MFILSCSAALAFGLFPFAAGQSVASGDRGKMETVPRPGLECLQVTLLIRQMVLDRYDSTSTGILSEQDKARLVEDARSAR
REARKAFLRKFDKDGDGRLSPEECRAFREHVEKRRGVRRPDAGPDKRDGIPFYPPAERKEIPPLPPPAEGVEMPMVEIRT
VGRKRFMVAPGLFLLTRNMLLQNYDANGNGRIDPEEHAVVMKDAAALYQAKMKEMMELYDLDQDGVLSPVEREQALADSH
KDSPLYAMEEPDDIDLFIRANISEVLLKESPVDAGDDKDKGTE
>Mature_283_residues
MFILSCSAALAFGLFPFAAGQSVASGDRGKMETVPRPGLECLQVTLLIRQMVLDRYDSTSTGILSEQDKARLVEDARSAR
REARKAFLRKFDKDGDGRLSPEECRAFREHVEKRRGVRRPDAGPDKRDGIPFYPPAERKEIPPLPPPAEGVEMPMVEIRT
VGRKRFMVAPGLFLLTRNMLLQNYDANGNGRIDPEEHAVVMKDAAALYQAKMKEMMELYDLDQDGVLSPVEREQALADSH
KDSPLYAMEEPDDIDLFIRANISEVLLKESPVDAGDDKDKGTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31681; Mature: 31681

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILSCSAALAFGLFPFAAGQSVASGDRGKMETVPRPGLECLQVTLLIRQMVLDRYDSTS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
TGILSEQDKARLVEDARSARREARKAFLRKFDKDGDGRLSPEECRAFREHVEKRRGVRRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DAGPDKRDGIPFYPPAERKEIPPLPPPAEGVEMPMVEIRTVGRKRFMVAPGLFLLTRNML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHEECCCHHHHHHHHHH
LQNYDANGNGRIDPEEHAVVMKDAAALYQAKMKEMMELYDLDQDGVLSPVEREQALADSH
HHCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
KDSPLYAMEEPDDIDLFIRANISEVLLKESPVDAGDDKDKGTE
CCCCEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFILSCSAALAFGLFPFAAGQSVASGDRGKMETVPRPGLECLQVTLLIRQMVLDRYDSTS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
TGILSEQDKARLVEDARSARREARKAFLRKFDKDGDGRLSPEECRAFREHVEKRRGVRRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DAGPDKRDGIPFYPPAERKEIPPLPPPAEGVEMPMVEIRTVGRKRFMVAPGLFLLTRNML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHEECCCHHHHHHHHHH
LQNYDANGNGRIDPEEHAVVMKDAAALYQAKMKEMMELYDLDQDGVLSPVEREQALADSH
HHCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
KDSPLYAMEEPDDIDLFIRANISEVLLKESPVDAGDDKDKGTE
CCCCEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA