Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734734

Identifier: 187734734

GI number: 187734734

Start: 279411

End: 279683

Strand: Reverse

Name: 187734734

Synonym: Amuc_0222

Alternate gene names: NA

Gene position: 279683-279411 (Counterclockwise)

Preceding gene: 187734735

Following gene: 187734733

Centisome position: 10.5

GC content: 58.61

Gene sequence:

>273_bases
ATGGGACAGCAAATCCGCAAAGTCACCAAGCGCCGCAGACGTATTGAATACCTCAAGCGTAAGAAGGAACAGTCCAAGTT
GAATTCCAATGCGCCTATCCGTCTGGCCGTTCCCGTTGCCAAGGATGCCAAGCCTGCCGCCAAGGAAGCTCCCGCCAAGA
AGACTGCGGCCAAGGCCCCGGCCAAAAAGACTGAAACCAAGGCTGCCGCCGCCAAGAAGGCCCCCGCTAAAAAGCCGGCT
GCCAAGAAGGCCGCTGAACCCGCCGCCGAATAA

Upstream 100 bases:

>100_bases
CTTTGTGCTTGCGTAAGGGAGGTGGGGTTGGTAGTTGTATCCACGCCCATGTGCCACATGGAGCTCGTAAGAATTAGTAA
ATATCATAGCAATTATCACT

Downstream 100 bases:

>100_bases
TTGCCCGGGCGGAGGCTGCCCCTCCGCGCGCCAGTCAAACAGTTGTTACAAGCCGCCGTGCGATTGCATGGCGGTTTTTT
GCGTGTATGGGCTTCCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MGQQIRKVTKRRRRIEYLKRKKEQSKLNSNAPIRLAVPVAKDAKPAAKEAPAKKTAAKAPAKKTETKAAAAKKAPAKKPA
AKKAAEPAAE

Sequences:

>Translated_90_residues
MGQQIRKVTKRRRRIEYLKRKKEQSKLNSNAPIRLAVPVAKDAKPAAKEAPAKKTAAKAPAKKTETKAAAAKKAPAKKPA
AKKAAEPAAE
>Mature_89_residues
GQQIRKVTKRRRRIEYLKRKKEQSKLNSNAPIRLAVPVAKDAKPAAKEAPAKKTAAKAPAKKTETKAAAAKKAPAKKPAA
KKAAEPAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9695; Mature: 9563

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQIRKVTKRRRRIEYLKRKKEQSKLNSNAPIRLAVPVAKDAKPAAKEAPAKKTAAKAP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHCC
AKKTETKAAAAKKAPAKKPAAKKAAEPAAE
CHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
GQQIRKVTKRRRRIEYLKRKKEQSKLNSNAPIRLAVPVAKDAKPAAKEAPAKKTAAKAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHCC
AKKTETKAAAAKKAPAKKPAAKKAAEPAAE
CHHHHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA