| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734729
Identifier: 187734729
GI number: 187734729
Start: 269680
End: 270333
Strand: Reverse
Name: 187734729
Synonym: Amuc_0217
Alternate gene names: NA
Gene position: 270333-269680 (Counterclockwise)
Preceding gene: 187734733
Following gene: 187734727
Centisome position: 10.15
GC content: 59.17
Gene sequence:
>654_bases ATGTGGAATGATCTTTCTCATGGATTTTCCGTGCTGGCGGATGCCCTGGCCTTCCTTTCCCGTTCCTGGGGGTTCTGGGT TTGCGCGGGCAGTGTGGCGGGGCTGGCCGCCGTTTATGCGTGGTGGAGAAAGCGGCTGGCCCTGTGGGCGTTTGTCCTGG CGTTCCTTTCCCTGCTGGCCGTGGTGGGGCTGGCGTGCCGCCAGGCGGTGTGTCAAAAAGCTTTCCTGTGGATTCATGAG CCGGATGTGCAGGCCCTTTCCGGAAAGTATGAGGTGGAACCATCTCCCAGAGAAAGGCGGTTTTTCCGCCCTCCGGAGTT GAAGCGTTTTTTCCAGGTCAGTTCTTCCACGCTCCTCCTGAATGAAGACGGGACGTGCGAGATTTCTTCCTTTCCCCGTC CGGAGGCATGGGGCAGGTGGATTGCCCGTCCGGAAGAGAGGGAGGACCTTTCCGTGCTGGAGGAAGATCTCGTTTCTTCC TGCCGCGGAACCTGGGCCCTGGTGAAAAAAGGGGGATATTACGGTGTCTCCATCGCCTATTCCCCCGGCAGGAGCCTGAT GTTGTACCTGGGCGGGGAAGGTGCGGAATGCCTGGTGATGCCGGTCAACCCTGCCGATCCGCTGGAAGCGGTGACGTTTG AAAAAACATTCTGA
Upstream 100 bases:
>100_bases TGACGGGAGTTTTTTATCGGGGCACAGCCTGAGGCCCGTGCCTTGAAAGGCGGCATTGTTGTCTTGACTTTGACTATGTT CCGGAGATTCTGGAGCACCT
Downstream 100 bases:
>100_bases CCCGGATTCTGTCCGCACGGGAACAAGGAAGGGAGGCGGGAATCCCGCCTCCCCCAATATGTTTTTTCCAACGCCGTTCC GGCTTTGACCGGGCGTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MWNDLSHGFSVLADALAFLSRSWGFWVCAGSVAGLAAVYAWWRKRLALWAFVLAFLSLLAVVGLACRQAVCQKAFLWIHE PDVQALSGKYEVEPSPRERRFFRPPELKRFFQVSSSTLLLNEDGTCEISSFPRPEAWGRWIARPEEREDLSVLEEDLVSS CRGTWALVKKGGYYGVSIAYSPGRSLMLYLGGEGAECLVMPVNPADPLEAVTFEKTF
Sequences:
>Translated_217_residues MWNDLSHGFSVLADALAFLSRSWGFWVCAGSVAGLAAVYAWWRKRLALWAFVLAFLSLLAVVGLACRQAVCQKAFLWIHE PDVQALSGKYEVEPSPRERRFFRPPELKRFFQVSSSTLLLNEDGTCEISSFPRPEAWGRWIARPEEREDLSVLEEDLVSS CRGTWALVKKGGYYGVSIAYSPGRSLMLYLGGEGAECLVMPVNPADPLEAVTFEKTF >Mature_217_residues MWNDLSHGFSVLADALAFLSRSWGFWVCAGSVAGLAAVYAWWRKRLALWAFVLAFLSLLAVVGLACRQAVCQKAFLWIHE PDVQALSGKYEVEPSPRERRFFRPPELKRFFQVSSSTLLLNEDGTCEISSFPRPEAWGRWIARPEEREDLSVLEEDLVSS CRGTWALVKKGGYYGVSIAYSPGRSLMLYLGGEGAECLVMPVNPADPLEAVTFEKTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24320; Mature: 24320
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNDLSHGFSVLADALAFLSRSWGFWVCAGSVAGLAAVYAWWRKRLALWAFVLAFLSLLA CCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGLACRQAVCQKAFLWIHEPDVQALSGKYEVEPSPRERRFFRPPELKRFFQVSSSTLLL HHHHHHHHHHHHHHHEEEECCCHHHHCCCEECCCCCHHCCCCCCHHHHHHHHHCCCEEEE NEDGTCEISSFPRPEAWGRWIARPEEREDLSVLEEDLVSSCRGTWALVKKGGYYGVSIAY CCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE SPGRSLMLYLGGEGAECLVMPVNPADPLEAVTFEKTF CCCCEEEEEECCCCCEEEEEECCCCCCCHHCCCCCCC >Mature Secondary Structure MWNDLSHGFSVLADALAFLSRSWGFWVCAGSVAGLAAVYAWWRKRLALWAFVLAFLSLLA CCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGLACRQAVCQKAFLWIHEPDVQALSGKYEVEPSPRERRFFRPPELKRFFQVSSSTLLL HHHHHHHHHHHHHHHEEEECCCHHHHCCCEECCCCCHHCCCCCCHHHHHHHHHCCCEEEE NEDGTCEISSFPRPEAWGRWIARPEEREDLSVLEEDLVSSCRGTWALVKKGGYYGVSIAY CCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE SPGRSLMLYLGGEGAECLVMPVNPADPLEAVTFEKTF CCCCEEEEEECCCCCEEEEEECCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA