Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734660

Identifier: 187734660

GI number: 187734660

Start: 180882

End: 181847

Strand: Reverse

Name: 187734660

Synonym: Amuc_0147

Alternate gene names: NA

Gene position: 181847-180882 (Counterclockwise)

Preceding gene: 187734663

Following gene: 187734658

Centisome position: 6.83

GC content: 54.04

Gene sequence:

>966_bases
ATGATTAAACAAATTCTGCCAATTGTTGTTGCCGCCTGCGTCGCTCCCTGCTTTGCCGCGGAAGGGTGGATTACCGATAT
GGATGCCGCCAAAAAACAGGCCGCCGAACAGAAAAAGGATTTAATGATTGAGTTCACCGGTTCCGACTGGTGTCCTCCTT
GCATGCAGCTCCGCGCCAACGTATTCAGCAAGCCTGACTTCCAGAAGGAAGCGCAGAAAAATTTCGTGCTGGTGGAGCTG
GATTATCCGCGCGGCAAGGAACAGTCCAAGGAAATGAAAGCCGCCAATGAAAAGCTTGCCCAGCAGTACGGCGTGCGGGG
ATTCCCGACCGTTGTGTTTGCGGACGCTTCCGGCAAGCCTTTTGGGGGATTTGTTGGAGGGCGCTCCGGGGATGATGTCA
TGAAAGCCATGCAGGATGCCCTGAAGAACAAGGAAGCTCTTAATGCCGCGGAAGCGAATGTTGCCAAGGCTGCTACGGAT
GAAGCGAAAGTTGCCGCTCTGATGGAAGTGCTCAAGCTGGCTCCTCAGGAATATGTGGACAATTTTTATGGTGACGTGAA
AGCGGAAATCAAGAAGCTGGACAAGGATGACAAGTCCGGCCTGAAAGCTGCAGACGCCCTCTCCGACCAGCTTAAAAAGG
AACGGAAAGATGTTCGAAATTATCTTGCCGGCAAGCTGACGGACAAGACTACGCCTGCGGAAGCCCTTCAGGTGGTTAAG
GCATATCCCGACCGCGACAAGCTTCTGCCGGAAACACAGCAGGAGTTGCTGATGATGGAGTTCGGGACCTACCTGAATTC
CACCGGTGACGTGGACGGCGCCGTTCTGATTCTGGATAAGGTGGCCGAGTTGAAGCCGGGAACGGAAGCCGGAATGCAGG
CCCCCCGCATCAAGGCCGGCATTCTTGCCAACAAGGATAAGATCAAGGCCCAGATTGACGCTGCCAAAAAGGCGCAGGGC
AAATAA

Upstream 100 bases:

>100_bases
GACTTCCCTGCGGAAGACGCACCCTTTTGGAGATTTTCTAAAAATGATTGAACAGGGGATTGACGCGGGCTGTCCGATTC
TACAATATTGAATTGTAGAT

Downstream 100 bases:

>100_bases
TTAAAGCCGCTTTTCTTTTCCCTTGCTTTGGGAAAACAGCCCCGCAACGGTTTTCTGCCGTTGCGGGGTTTTGCTTTCCC
CCTGTTTCTCCGGTTACTCA

Product: Thioredoxin domain

Products: NA

Alternate protein names: Protein Disulfide Isomerase; Thiol-Disulfide Isomerase Or Thioredoxin; Thioredoxin Family Protein; Thioredoxin Disulfide Isomerase; Thioredoxin/Thiol-Disulfide Isomerase

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL
DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD
EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK
AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG
K

Sequences:

>Translated_321_residues
MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL
DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD
EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK
AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG
K
>Mature_321_residues
MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL
DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD
EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK
AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG
K

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34967; Mature: 34967

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRAN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHH
VFSKPDFQKEAQKNFVLVELDYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKP
HCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
FGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATDEAKVAALMEVLKLAPQEYVD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHH
ILANKDKIKAQIDAAKKAQGK
HHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRAN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHH
VFSKPDFQKEAQKNFVLVELDYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKP
HCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
FGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATDEAKVAALMEVLKLAPQEYVD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHH
ILANKDKIKAQIDAAKKAQGK
HHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA