| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734660
Identifier: 187734660
GI number: 187734660
Start: 180882
End: 181847
Strand: Reverse
Name: 187734660
Synonym: Amuc_0147
Alternate gene names: NA
Gene position: 181847-180882 (Counterclockwise)
Preceding gene: 187734663
Following gene: 187734658
Centisome position: 6.83
GC content: 54.04
Gene sequence:
>966_bases ATGATTAAACAAATTCTGCCAATTGTTGTTGCCGCCTGCGTCGCTCCCTGCTTTGCCGCGGAAGGGTGGATTACCGATAT GGATGCCGCCAAAAAACAGGCCGCCGAACAGAAAAAGGATTTAATGATTGAGTTCACCGGTTCCGACTGGTGTCCTCCTT GCATGCAGCTCCGCGCCAACGTATTCAGCAAGCCTGACTTCCAGAAGGAAGCGCAGAAAAATTTCGTGCTGGTGGAGCTG GATTATCCGCGCGGCAAGGAACAGTCCAAGGAAATGAAAGCCGCCAATGAAAAGCTTGCCCAGCAGTACGGCGTGCGGGG ATTCCCGACCGTTGTGTTTGCGGACGCTTCCGGCAAGCCTTTTGGGGGATTTGTTGGAGGGCGCTCCGGGGATGATGTCA TGAAAGCCATGCAGGATGCCCTGAAGAACAAGGAAGCTCTTAATGCCGCGGAAGCGAATGTTGCCAAGGCTGCTACGGAT GAAGCGAAAGTTGCCGCTCTGATGGAAGTGCTCAAGCTGGCTCCTCAGGAATATGTGGACAATTTTTATGGTGACGTGAA AGCGGAAATCAAGAAGCTGGACAAGGATGACAAGTCCGGCCTGAAAGCTGCAGACGCCCTCTCCGACCAGCTTAAAAAGG AACGGAAAGATGTTCGAAATTATCTTGCCGGCAAGCTGACGGACAAGACTACGCCTGCGGAAGCCCTTCAGGTGGTTAAG GCATATCCCGACCGCGACAAGCTTCTGCCGGAAACACAGCAGGAGTTGCTGATGATGGAGTTCGGGACCTACCTGAATTC CACCGGTGACGTGGACGGCGCCGTTCTGATTCTGGATAAGGTGGCCGAGTTGAAGCCGGGAACGGAAGCCGGAATGCAGG CCCCCCGCATCAAGGCCGGCATTCTTGCCAACAAGGATAAGATCAAGGCCCAGATTGACGCTGCCAAAAAGGCGCAGGGC AAATAA
Upstream 100 bases:
>100_bases GACTTCCCTGCGGAAGACGCACCCTTTTGGAGATTTTCTAAAAATGATTGAACAGGGGATTGACGCGGGCTGTCCGATTC TACAATATTGAATTGTAGAT
Downstream 100 bases:
>100_bases TTAAAGCCGCTTTTCTTTTCCCTTGCTTTGGGAAAACAGCCCCGCAACGGTTTTCTGCCGTTGCGGGGTTTTGCTTTCCC CCTGTTTCTCCGGTTACTCA
Product: Thioredoxin domain
Products: NA
Alternate protein names: Protein Disulfide Isomerase; Thiol-Disulfide Isomerase Or Thioredoxin; Thioredoxin Family Protein; Thioredoxin Disulfide Isomerase; Thioredoxin/Thiol-Disulfide Isomerase
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG K
Sequences:
>Translated_321_residues MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG K >Mature_321_residues MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRANVFSKPDFQKEAQKNFVLVEL DYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKPFGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATD EAKVAALMEVLKLAPQEYVDNFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAGILANKDKIKAQIDAAKKAQG K
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34967; Mature: 34967
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRAN CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHH VFSKPDFQKEAQKNFVLVELDYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKP HCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC FGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATDEAKVAALMEVLKLAPQEYVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH NFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAG HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHH ILANKDKIKAQIDAAKKAQGK HHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKQILPIVVAACVAPCFAAEGWITDMDAAKKQAAEQKKDLMIEFTGSDWCPPCMQLRAN CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHH VFSKPDFQKEAQKNFVLVELDYPRGKEQSKEMKAANEKLAQQYGVRGFPTVVFADASGKP HCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC FGGFVGGRSGDDVMKAMQDALKNKEALNAAEANVAKAATDEAKVAALMEVLKLAPQEYVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH NFYGDVKAEIKKLDKDDKSGLKAADALSDQLKKERKDVRNYLAGKLTDKTTPAEALQVVK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AYPDRDKLLPETQQELLMMEFGTYLNSTGDVDGAVLILDKVAELKPGTEAGMQAPRIKAG HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHH ILANKDKIKAQIDAAKKAQGK HHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA