| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187734636
Identifier: 187734636
GI number: 187734636
Start: 150978
End: 151466
Strand: Direct
Name: 187734636
Synonym: Amuc_0122
Alternate gene names: NA
Gene position: 150978-151466 (Clockwise)
Preceding gene: 187734635
Following gene: 187734638
Centisome position: 5.67
GC content: 62.17
Gene sequence:
>489_bases ATGAGAGAATCCGCCACATGCTCCCAATGCGGCCACGGGTACACCTACCCGGCCGGACTGGACGCCAAAACCGGCATGCG CTGCCCGGCGTGCGGCCTTCTGATTCACGTTACAACGGGGCTTCCCTTCGGGGAAGCCTCCTCTTCGCCATCCGGCCGCA AACCGGAAAACGCCATGAAAACGCACCCCGCCCTGCCTCCCGTCAGAAAAAAGCGGACGTCTTTCTCCGGACGCGATACT GACGAACGCGGCATCCGGCAGGAAAACCTGCCGCAGCGGCCAGCCGCAGCATCCGGCCGCCGGATTCCCGCTACATCATG GCTGGCATGGGGGCTGTCCCTGATCGCGTTGATTCTGGCCTTTATTTTCCCCTCCTACGGAAACGGTTCCACAGATCCGC TGTACATGCTTCAGTGCCTGCCCTCCATGGTATTCGGCTGCACTGCGGCCATCCTTTTCATCCAGGGCCTGGCGGCTATG CGCCGCTAA
Upstream 100 bases:
>100_bases ATGAAAGCCAAGCTTGAGGAAATCCGCCAGAGGCCCGAAACCAAGGCTGACCAGGAGGACCTGCTTCCCTTGGACGACTA ACATCCATTCGGGCCAGATC
Downstream 100 bases:
>100_bases AAAACAAAGCCTGCGGCCCCATCCGGGGCCCATGCGGCAGCCCCGCCCCAAAAACGGCCGGAATGCCTGGTTTCCATGCC CCTTTCCGCGGAACCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRESATCSQCGHGYTYPAGLDAKTGMRCPACGLLIHVTTGLPFGEASSSPSGRKPENAMKTHPALPPVRKKRTSFSGRDT DERGIRQENLPQRPAAASGRRIPATSWLAWGLSLIALILAFIFPSYGNGSTDPLYMLQCLPSMVFGCTAAILFIQGLAAM RR
Sequences:
>Translated_162_residues MRESATCSQCGHGYTYPAGLDAKTGMRCPACGLLIHVTTGLPFGEASSSPSGRKPENAMKTHPALPPVRKKRTSFSGRDT DERGIRQENLPQRPAAASGRRIPATSWLAWGLSLIALILAFIFPSYGNGSTDPLYMLQCLPSMVFGCTAAILFIQGLAAM RR >Mature_162_residues MRESATCSQCGHGYTYPAGLDAKTGMRCPACGLLIHVTTGLPFGEASSSPSGRKPENAMKTHPALPPVRKKRTSFSGRDT DERGIRQENLPQRPAAASGRRIPATSWLAWGLSLIALILAFIFPSYGNGSTDPLYMLQCLPSMVFGCTAAILFIQGLAAM RR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17400; Mature: 17400
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESATCSQCGHGYTYPAGLDAKTGMRCPACGLLIHVTTGLPFGEASSSPSGRKPENAMK CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH THPALPPVRKKRTSFSGRDTDERGIRQENLPQRPAAASGRRIPATSWLAWGLSLIALILA CCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FIFPSYGNGSTDPLYMLQCLPSMVFGCTAAILFIQGLAAMRR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRESATCSQCGHGYTYPAGLDAKTGMRCPACGLLIHVTTGLPFGEASSSPSGRKPENAMK CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH THPALPPVRKKRTSFSGRDTDERGIRQENLPQRPAAASGRRIPATSWLAWGLSLIALILA CCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FIFPSYGNGSTDPLYMLQCLPSMVFGCTAAILFIQGLAAMRR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA