| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734620
Identifier: 187734620
GI number: 187734620
Start: 131881
End: 133017
Strand: Reverse
Name: 187734620
Synonym: Amuc_0106
Alternate gene names: NA
Gene position: 133017-131881 (Counterclockwise)
Preceding gene: 187734621
Following gene: 187734610
Centisome position: 4.99
GC content: 60.07
Gene sequence:
>1137_bases ATGAATGAGTACCGGCAGATAACTGAAGCTTTTCAGGAAAACTTCCGTAACTACGGAGAATTGGGCGCCTCCGTTTCTGT CTGGAAGGAGGGAAGGGAAATCGTTTCCCTGCATTCCGGGTTTGCCGCAGCGGATAAAACGCGTCCATGGACGGAACATT CGCTGGTGCCCGTTTACTCCGCCACCAAGGGAGCCGCATCCGCCACCCTTCTGCTGGCCCTGCACCAGCAGGGAGCCTCG CCGCAGATGAGCATGGGGGAACTGTGGCCTGAATTCCCGCTGCCCTATGCATCCATCGCGCAGATGATGTCCCATCAATG CGGTTTGGCGGCTTTCTCCCGGACGGCAAGCGTGTTTGACCATGAGGATTGCGTGCGCGCCCTGGAGGAAACCGTTCCGG CGTGGCAGCCGCCGGAACACGGTTACCATCCGCATACTTACGGAGTGATGCTTGATGAACTCATGCTGCGGCTGACCGGG GAACGCCTGTGGCGTTACTGGGAGGAATGCATCCGCAAACCGTTGAATCTGGATTTTTACATCGGGTTGCCGGAATCCGA ATGGAACCGCGTGGCGACGCTGTATCCCGGCAAGATGGACATGTCCAACATGGGTACGCCGTTTTATCTGGAATACATGA ACAAGGGCACGCCCGTAAACCGTGCGTTCAATACTCTGATAGGGCTGAACAGTGTGCGGCAGATGAACACGCCGGAAGCG TGGGTGTACGGAGTTCCGGCCTTTGGCGGCGTGGCTTCCGCCCGCGGCATGGCGCAGTTCTACCAGGCCTGCCTGGGGCT GGATGAACTCCGGGTATTCCCGTCCGACGTGCGCGGCTGGATGCGGAACGTCGTCATTGACGGGCCGGACCTGACGCTGA AAACGCCCACCGCCTTTTCCTGCGGCTTCATGCACGATCCCGCAGACCCCGCCACGGGCCGCAAGCTGCGCCATCTGTTC GGCTCCGGCGGCTTCGGTCATGCCGGGGCGGGCGGTTCCCATGCCTTTGCGGATCCGGCCCACGGCCTTTCCTTCGGCTA CGCGATGAACCGCATGGACTTGAACGTGCTGCCCGGCGTGAAGACCCGGAACCTTATCAGCGCAGTCATGAAAGAAGTGG CTGGAGAGTGTTCTTAA
Upstream 100 bases:
>100_bases GCGCTGACCATCCAGGGCAGCGCCGGAGCTTGCTTTCGGAACCGGAGGGGAGTATTTTCTTGTCCGGACGCCGGGAGTAA CGCCGGGTCATTTTAAGGGA
Downstream 100 bases:
>100_bases CCTGAGCCCCGGCTATCTGTTCAATTCCATCGGAAGTTTCCGGATAGTTTATTCGTTCCTATTCTTGCGGCCTTTTTTAA TCTGAATGTGGGGGGACAAA
Product: beta-lactamase
Products: NA
Alternate protein names: Esterase; Carboxylesterase; Esterase/Lipase LipP; Beta-Lactamase Class C; Esterase A; Lactone Hydrolase; Lipase LipD; Beta-Lactamase-Like Protein; Beta-Lactamase Protein; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNEYRQITEAFQENFRNYGELGASVSVWKEGREIVSLHSGFAAADKTRPWTEHSLVPVYSATKGAASATLLLALHQQGAS PQMSMGELWPEFPLPYASIAQMMSHQCGLAAFSRTASVFDHEDCVRALEETVPAWQPPEHGYHPHTYGVMLDELMLRLTG ERLWRYWEECIRKPLNLDFYIGLPESEWNRVATLYPGKMDMSNMGTPFYLEYMNKGTPVNRAFNTLIGLNSVRQMNTPEA WVYGVPAFGGVASARGMAQFYQACLGLDELRVFPSDVRGWMRNVVIDGPDLTLKTPTAFSCGFMHDPADPATGRKLRHLF GSGGFGHAGAGGSHAFADPAHGLSFGYAMNRMDLNVLPGVKTRNLISAVMKEVAGECS
Sequences:
>Translated_378_residues MNEYRQITEAFQENFRNYGELGASVSVWKEGREIVSLHSGFAAADKTRPWTEHSLVPVYSATKGAASATLLLALHQQGAS PQMSMGELWPEFPLPYASIAQMMSHQCGLAAFSRTASVFDHEDCVRALEETVPAWQPPEHGYHPHTYGVMLDELMLRLTG ERLWRYWEECIRKPLNLDFYIGLPESEWNRVATLYPGKMDMSNMGTPFYLEYMNKGTPVNRAFNTLIGLNSVRQMNTPEA WVYGVPAFGGVASARGMAQFYQACLGLDELRVFPSDVRGWMRNVVIDGPDLTLKTPTAFSCGFMHDPADPATGRKLRHLF GSGGFGHAGAGGSHAFADPAHGLSFGYAMNRMDLNVLPGVKTRNLISAVMKEVAGECS >Mature_378_residues MNEYRQITEAFQENFRNYGELGASVSVWKEGREIVSLHSGFAAADKTRPWTEHSLVPVYSATKGAASATLLLALHQQGAS PQMSMGELWPEFPLPYASIAQMMSHQCGLAAFSRTASVFDHEDCVRALEETVPAWQPPEHGYHPHTYGVMLDELMLRLTG ERLWRYWEECIRKPLNLDFYIGLPESEWNRVATLYPGKMDMSNMGTPFYLEYMNKGTPVNRAFNTLIGLNSVRQMNTPEA WVYGVPAFGGVASARGMAQFYQACLGLDELRVFPSDVRGWMRNVVIDGPDLTLKTPTAFSCGFMHDPADPATGRKLRHLF GSGGFGHAGAGGSHAFADPAHGLSFGYAMNRMDLNVLPGVKTRNLISAVMKEVAGECS
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17538001, Length=371, Percent_Identity=26.1455525606469, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17535191, Length=368, Percent_Identity=25, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17535177, Length=403, Percent_Identity=23.5732009925558, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17538474, Length=379, Percent_Identity=24.0105540897098, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71990590, Length=379, Percent_Identity=22.6912928759894, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71983659, Length=371, Percent_Identity=23.1805929919137, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71983666, Length=300, Percent_Identity=24.3333333333333, Blast_Score=85, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41842; Mature: 41842
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYRQITEAFQENFRNYGELGASVSVWKEGREIVSLHSGFAAADKTRPWTEHSLVPVYS CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCCEEEEC ATKGAASATLLLALHQQGASPQMSMGELWPEFPLPYASIAQMMSHQCGLAAFSRTASVFD CCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC HEDCVRALEETVPAWQPPEHGYHPHTYGVMLDELMLRLTGERLWRYWEECIRKPLNLDFY HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IGLPESEWNRVATLYPGKMDMSNMGTPFYLEYMNKGTPVNRAFNTLIGLNSVRQMNTPEA EECCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC WVYGVPAFGGVASARGMAQFYQACLGLDELRVFPSDVRGWMRNVVIDGPDLTLKTPTAFS EEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHEECCCCCEEECCCCCC CGFMHDPADPATGRKLRHLFGSGGFGHAGAGGSHAFADPAHGLSFGYAMNRMDLNVLPGV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC KTRNLISAVMKEVAGECS CHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEYRQITEAFQENFRNYGELGASVSVWKEGREIVSLHSGFAAADKTRPWTEHSLVPVYS CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCCEEEEC ATKGAASATLLLALHQQGASPQMSMGELWPEFPLPYASIAQMMSHQCGLAAFSRTASVFD CCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC HEDCVRALEETVPAWQPPEHGYHPHTYGVMLDELMLRLTGERLWRYWEECIRKPLNLDFY HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IGLPESEWNRVATLYPGKMDMSNMGTPFYLEYMNKGTPVNRAFNTLIGLNSVRQMNTPEA EECCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC WVYGVPAFGGVASARGMAQFYQACLGLDELRVFPSDVRGWMRNVVIDGPDLTLKTPTAFS EEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHEECCCCCEEECCCCCC CGFMHDPADPATGRKLRHLFGSGGFGHAGAGGSHAFADPAHGLSFGYAMNRMDLNVLPGV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC KTRNLISAVMKEVAGECS CHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA