| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734613
Identifier: 187734613
GI number: 187734613
Start: 125132
End: 125641
Strand: Direct
Name: 187734613
Synonym: Amuc_0099
Alternate gene names: NA
Gene position: 125132-125641 (Clockwise)
Preceding gene: 187734612
Following gene: 187734614
Centisome position: 4.7
GC content: 60.59
Gene sequence:
>510_bases ATGAAGATAGGCATTTTTTCCGACTTGCACAACCGCACAGACCATCTGGAGCCAGCCATGCACCGGATGCGCCTGCTGGG CTGCGGACATTTCATTTTCCTGGGCGACTGCACCACCCCGGAGAGTTTCCGGCGCCTGATTGAACTGACGGAGGACTTTC CTCTGGATGCCGTTCCGGGCAACAACGACTACGATGTGGAAACCATGCGGCGGATGGCCGCCAGTTCCCCGGCGGCGCGC CTGCATCCGGAACATGCCCTTATCACCCGGTACGGCATGAAACTTTCCCTCTCCCATTACCCAAAATACGCCTTGCGGGA AGCGCGCAGCGGAAACGCAGACGCCGCCCTGTACGGCCATACCCACCAGGCCGTGAGCGAAAGATGCGGCGGCTGCCTGC TGGCCAATCCCGGAGAACTCCAGGGCAGGACCGGACGCATCGGTTTCGGCGTCCTGGATACGGACACCCGCATCATCAAC CTGCATAACCTGGACTTTTACGCCCCATGA
Upstream 100 bases:
>100_bases CACCTGCCTGCTGCGCAAGGAGGGAGGCCATCCGCTCCCGCTTTCCCTGCCGGATGAATTGAAGGCATGGCCCATTCATG CCATGAATTGTTGAAAAAAG
Downstream 100 bases:
>100_bases ACACGCTGGACGTCTGCTGTGCCCTGATTGAACTGCCCGCCGCACGGGGCCCTCTTCTTCTGGGCGCCAAAAAGAAAACG GGGCAGTCCAACGGGCTTCT
Product: phosphodiesterase, MJ0936 family
Products: NA
Alternate protein names: Phosphoesterase
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKIGIFSDLHNRTDHLEPAMHRMRLLGCGHFIFLGDCTTPESFRRLIELTEDFPLDAVPGNNDYDVETMRRMAASSPAAR LHPEHALITRYGMKLSLSHYPKYALREARSGNADAALYGHTHQAVSERCGGCLLANPGELQGRTGRIGFGVLDTDTRIIN LHNLDFYAP
Sequences:
>Translated_169_residues MKIGIFSDLHNRTDHLEPAMHRMRLLGCGHFIFLGDCTTPESFRRLIELTEDFPLDAVPGNNDYDVETMRRMAASSPAAR LHPEHALITRYGMKLSLSHYPKYALREARSGNADAALYGHTHQAVSERCGGCLLANPGELQGRTGRIGFGVLDTDTRIIN LHNLDFYAP >Mature_169_residues MKIGIFSDLHNRTDHLEPAMHRMRLLGCGHFIFLGDCTTPESFRRLIELTEDFPLDAVPGNNDYDVETMRRMAASSPAAR LHPEHALITRYGMKLSLSHYPKYALREARSGNADAALYGHTHQAVSERCGGCLLANPGELQGRTGRIGFGVLDTDTRIIN LHNLDFYAP
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18878; Mature: 18878
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIFSDLHNRTDHLEPAMHRMRLLGCGHFIFLGDCTTPESFRRLIELTEDFPLDAVPG CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCC NNDYDVETMRRMAASSPAARLHPEHALITRYGMKLSLSHYPKYALREARSGNADAALYGH CCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHCCEEECCCCCHHHHHHHCCCCCCEEEECC THQAVSERCGGCLLANPGELQGRTGRIGFGVLDTDTRIINLHNLDFYAP HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure MKIGIFSDLHNRTDHLEPAMHRMRLLGCGHFIFLGDCTTPESFRRLIELTEDFPLDAVPG CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCC NNDYDVETMRRMAASSPAARLHPEHALITRYGMKLSLSHYPKYALREARSGNADAALYGH CCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHCCEEECCCCCHHHHHHHCCCCCCEEEECC THQAVSERCGGCLLANPGELQGRTGRIGFGVLDTDTRIINLHNLDFYAP HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA