| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is glkA [H]
Identifier: 187734611
GI number: 187734611
Start: 123193
End: 124152
Strand: Direct
Name: glkA [H]
Synonym: Amuc_0097
Alternate gene names: 187734611
Gene position: 123193-124152 (Clockwise)
Preceding gene: 187734603
Following gene: 187734612
Centisome position: 4.62
GC content: 58.96
Gene sequence:
>960_bases ATGACAGCTTCAACCATTCCCTCCATCGGCATTGACTTCGGAGGCACCTCCATCAAGATGGGGGTCGTCAAGGGCGCGGA AGTAATCGCCCACGCTCCTTCAATAGCCACCCAGGAATACGGCAATCCCGATCAACTGATTGAAGCCATAGCCCAGTTCG TGAATATGCTGCGGCTGAATCACCCGGAAGTGCAGGCCATCGGCATGGGAATGCCGGGGTTCGTCAATTTTTACCAGGGG ACCGTTTATACGCTTACCAACGTGCCCGGTTGGAACAACGTTCCGGTAAAGGACATGCTCCAGGCTGCCTGCGGACTGCC CGTATACGTGGAAAACGACGCCAACTGCATGGCTTATGCGGAATGGAAGCTGGGCGCCGGAAAAGGAAAAAGGCATCTGG TCTGCCTGACCCTCGGCACCGGCGTTGGCAGCGGCCTGATCGTGAACGGAGAACTTCTGCGCGGGGCTACCTGCTCCGCC GGGGAGCTGGGGCAGACGAGCATCGACTACCGGGGGCGTCTGGGCCATTACGGAAACCGCGGCTCCCTGGAAGATTATGT AGGCAACCGGGAAATAGCTGCGGATGCACGCACGCTGTATGCCAGCCACGGCATTGACAAGGCCATTGTGGACTGCAACC CCATCTCTTTGGAACGGGCCGCATTGGCTGGTGATGAAGTAGCCGAGCAAGTATGGCGGGACCTGGCCGTAAAACTCTCC TGCGCCCTGATGAATTGCTGCTATCTCCTGAACCCGGAAGCCATCATCATCGGCGGGGGCGTGGCCAAGGCCAGAACCCT GCTTTTCCAGCCCCTTCAGGAAATCATGAAAACCCAGCTCGCCGCCCCTCTGGTGGAATACCTTGAAATCCTTCCCGCCC AGTTCGGTACGGAGGCGGGCATCCTGGGGGCCGCCCATCTGGCTCTCAACACCCACTTCGGAGAAACATTCCGGGCCTGA
Upstream 100 bases:
>100_bases CCCCCCCCTTTTGCACCCTCTATTTTCCTGTCGGGATTTTACCGGGAACATACTTCTTTTAACCTTTTCAACGCCCGGTA AAATTCTATATTGGCGTTAT
Downstream 100 bases:
>100_bases TCTCGTGTCTTCCTCCCAAATACTCAAACTCGCCCGCAAACTGGAATTGACGGCGGAACAGGAACGGGATTTCCTGGACG CCATGCAGGCCGGGAACCGT
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTASTIPSIGIDFGGTSIKMGVVKGAEVIAHAPSIATQEYGNPDQLIEAIAQFVNMLRLNHPEVQAIGMGMPGFVNFYQG TVYTLTNVPGWNNVPVKDMLQAACGLPVYVENDANCMAYAEWKLGAGKGKRHLVCLTLGTGVGSGLIVNGELLRGATCSA GELGQTSIDYRGRLGHYGNRGSLEDYVGNREIAADARTLYASHGIDKAIVDCNPISLERAALAGDEVAEQVWRDLAVKLS CALMNCCYLLNPEAIIIGGGVAKARTLLFQPLQEIMKTQLAAPLVEYLEILPAQFGTEAGILGAAHLALNTHFGETFRA
Sequences:
>Translated_319_residues MTASTIPSIGIDFGGTSIKMGVVKGAEVIAHAPSIATQEYGNPDQLIEAIAQFVNMLRLNHPEVQAIGMGMPGFVNFYQG TVYTLTNVPGWNNVPVKDMLQAACGLPVYVENDANCMAYAEWKLGAGKGKRHLVCLTLGTGVGSGLIVNGELLRGATCSA GELGQTSIDYRGRLGHYGNRGSLEDYVGNREIAADARTLYASHGIDKAIVDCNPISLERAALAGDEVAEQVWRDLAVKLS CALMNCCYLLNPEAIIIGGGVAKARTLLFQPLQEIMKTQLAAPLVEYLEILPAQFGTEAGILGAAHLALNTHFGETFRA >Mature_318_residues TASTIPSIGIDFGGTSIKMGVVKGAEVIAHAPSIATQEYGNPDQLIEAIAQFVNMLRLNHPEVQAIGMGMPGFVNFYQGT VYTLTNVPGWNNVPVKDMLQAACGLPVYVENDANCMAYAEWKLGAGKGKRHLVCLTLGTGVGSGLIVNGELLRGATCSAG ELGQTSIDYRGRLGHYGNRGSLEDYVGNREIAADARTLYASHGIDKAIVDCNPISLERAALAGDEVAEQVWRDLAVKLSC ALMNCCYLLNPEAIIIGGGVAKARTLLFQPLQEIMKTQLAAPLVEYLEILPAQFGTEAGILGAAHLALNTHFGETFRA
Specific function: Required for glucose repression of many different genes [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=274, Percent_Identity=28.8321167883212, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4885285, Length=274, Percent_Identity=28.8321167883212, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI190014632, Length=275, Percent_Identity=28.7272727272727, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI298566315, Length=274, Percent_Identity=28.8321167883212, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1787878, Length=265, Percent_Identity=25.6603773584906, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87081733, Length=310, Percent_Identity=28.7096774193548, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787363, Length=312, Percent_Identity=28.525641025641, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786891, Length=259, Percent_Identity=25.0965250965251, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33909; Mature: 33778
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTIPSIGIDFGGTSIKMGVVKGAEVIAHAPSIATQEYGNPDQLIEAIAQFVNMLRLN CCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC HPEVQAIGMGMPGFVNFYQGTVYTLTNVPGWNNVPVKDMLQAACGLPVYVENDANCMAYA CCCCEEECCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEE EWKLGAGKGKRHLVCLTLGTGVGSGLIVNGELLRGATCSAGELGQTSIDYRGRLGHYGNR EEEECCCCCCCEEEEEEECCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCC GSLEDYVGNREIAADARTLYASHGIDKAIVDCNPISLERAALAGDEVAEQVWRDLAVKLS CCHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHH CALMNCCYLLNPEAIIIGGGVAKARTLLFQPLQEIMKTQLAAPLVEYLEILPAQFGTEAG HHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ILGAAHLALNTHFGETFRA HHHHHHHEEECCCCHHHCC >Mature Secondary Structure TASTIPSIGIDFGGTSIKMGVVKGAEVIAHAPSIATQEYGNPDQLIEAIAQFVNMLRLN CCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC HPEVQAIGMGMPGFVNFYQGTVYTLTNVPGWNNVPVKDMLQAACGLPVYVENDANCMAYA CCCCEEECCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEE EWKLGAGKGKRHLVCLTLGTGVGSGLIVNGELLRGATCSAGELGQTSIDYRGRLGHYGNR EEEECCCCCCCEEEEEEECCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCC GSLEDYVGNREIAADARTLYASHGIDKAIVDCNPISLERAALAGDEVAEQVWRDLAVKLS CCHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHH CALMNCCYLLNPEAIIIGGGVAKARTLLFQPLQEIMKTQLAAPLVEYLEILPAQFGTEAG HHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ILGAAHLALNTHFGETFRA HHHHHHHEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435260; 12000953 [H]