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The map label for this gene is ycgM [C]

Identifier: 187734578

GI number: 187734578

Start: 86946

End: 87824

Strand: Reverse

Name: ycgM [C]

Synonym: Amuc_0064

Alternate gene names: 187734578

Gene position: 87824-86946 (Counterclockwise)

Preceding gene: 187734589

Following gene: 187734577

Centisome position: 3.3

GC content: 56.31

Gene sequence:

>879_bases
GTGAAGATCAGATTTTACCTGAATGACCAGGCGGAGCGCATCATGGCTCTGTGGAGCGAAAGCCGCGGGGAATACCTGGC
GGCGGACTCCGTGCTTGCCGAGGCTGATGCCTGCATTTGCGGAGAAACGGGTTCCTGCGGAGAGGAAATGAAGCGCATTG
TCGCGTTTCTGGATAGTGCCGCCGCCAAAGCTGTCAACCCTGAATGGATGATTGATACCGCGCTGCCCTGTTCCCCTTCC
AAGCTGGTGTGCCTGGGAAAAAGTTATGCAGACCATGCGAAGGAGTTTGACGGGGATTCCGTGCAGGAACCGGCTGTTTT
TCTGAAGTCGCCTTCCGCCATTACTTCCTGCAGTGATGTTGTTTTGTATCCGCCCGGCTGCGACAAGCTGGATTATGAGA
TTGAATTGGCCGTAGTGATTAAGGATGTGCTGAAAAACGCTTCCCCAGAGGAGGCCGCACGGGCTATCAGCGGCTATACC
CTGATGTGCGACTATTCGGAAAGGGCCAACCAGCTGGAACATGGCGGGCAGTGGACCAAGGGGAAGAGCTATGACAGCTT
TGCCCCGATGGGGCCCACGTTCATTTCCGCTGATGAACTTGGGGACGGCTCCGGCATTCCTCTGGAATTGAAAGTGAACG
GGGAAGTGCGCCAGAGCGGCAATACGGACGGCTTGATCTGGCCTGTTCCGCGTCTGATTGCCTATGTTTCCCGGTTCATG
ACTTTATGGCCCGGAGATGTGGTTTCCACCGGCACTCCGGGAGGCGTGGGGATGGGGATGAAGCCTCCGGTATATTTGAA
ACCCGGGGATGTGGTGGAATGGGGAAGCCCCGCTTTTGGCTTCGCTTCCCAGGCTGTGGTAATTGATGATGAGGGGTAG

Upstream 100 bases:

>100_bases
ATGCTTTCACAGAGCGTCCGGGCGGCGGAAGAGGGCCGCCGGAGAGAAGAATGACGGAACCGCTCTTTGCTTAAAAGGAG
GAGCTTTGTAGGATGGAAGG

Downstream 100 bases:

>100_bases
GGGAATGGTTCTCCGGCCTTGTTGAATGTGGAGGGGGAAGGGAAAGCTCTGTCCCTTCCCGCTTCTGCGTATTTCTTCTG
TATCCGGCGCATTGTTTTCC

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKIRFYLNDQAERIMALWSESRGEYLAADSVLAEADACICGETGSCGEEMKRIVAFLDSAAAKAVNPEWMIDTALPCSPS
KLVCLGKSYADHAKEFDGDSVQEPAVFLKSPSAITSCSDVVLYPPGCDKLDYEIELAVVIKDVLKNASPEEAARAISGYT
LMCDYSERANQLEHGGQWTKGKSYDSFAPMGPTFISADELGDGSGIPLELKVNGEVRQSGNTDGLIWPVPRLIAYVSRFM
TLWPGDVVSTGTPGGVGMGMKPPVYLKPGDVVEWGSPAFGFASQAVVIDDEG

Sequences:

>Translated_292_residues
MKIRFYLNDQAERIMALWSESRGEYLAADSVLAEADACICGETGSCGEEMKRIVAFLDSAAAKAVNPEWMIDTALPCSPS
KLVCLGKSYADHAKEFDGDSVQEPAVFLKSPSAITSCSDVVLYPPGCDKLDYEIELAVVIKDVLKNASPEEAARAISGYT
LMCDYSERANQLEHGGQWTKGKSYDSFAPMGPTFISADELGDGSGIPLELKVNGEVRQSGNTDGLIWPVPRLIAYVSRFM
TLWPGDVVSTGTPGGVGMGMKPPVYLKPGDVVEWGSPAFGFASQAVVIDDEG
>Mature_292_residues
MKIRFYLNDQAERIMALWSESRGEYLAADSVLAEADACICGETGSCGEEMKRIVAFLDSAAAKAVNPEWMIDTALPCSPS
KLVCLGKSYADHAKEFDGDSVQEPAVFLKSPSAITSCSDVVLYPPGCDKLDYEIELAVVIKDVLKNASPEEAARAISGYT
LMCDYSERANQLEHGGQWTKGKSYDSFAPMGPTFISADELGDGSGIPLELKVNGEVRQSGNTDGLIWPVPRLIAYVSRFM
TLWPGDVVSTGTPGGVGMGMKPPVYLKPGDVVEWGSPAFGFASQAVVIDDEG

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=230, Percent_Identity=40.4347826086956, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI40786394, Length=196, Percent_Identity=42.3469387755102, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI215422413, Length=180, Percent_Identity=38.8888888888889, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI13654274, Length=180, Percent_Identity=38.8888888888889, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI66348062, Length=181, Percent_Identity=38.6740331491713, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI1787428, Length=181, Percent_Identity=39.7790055248619, Blast_Score=127, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17557057, Length=199, Percent_Identity=35.1758793969849, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324161, Length=228, Percent_Identity=30.7017543859649, Blast_Score=108, Evalue=9e-25,
Organism=Drosophila melanogaster, GI28572127, Length=276, Percent_Identity=34.0579710144928, Blast_Score=144, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24663695, Length=263, Percent_Identity=31.1787072243346, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28571789, Length=198, Percent_Identity=35.3535353535354, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 31328; Mature: 31328

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRFYLNDQAERIMALWSESRGEYLAADSVLAEADACICGETGSCGEEMKRIVAFLDSA
CEEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
AAKAVNPEWMIDTALPCSPSKLVCLGKSYADHAKEFDGDSVQEPAVFLKSPSAITSCSDV
HHHCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCCE
VLYPPGCDKLDYEIELAVVIKDVLKNASPEEAARAISGYTLMCDYSERANQLEHGGQWTK
EEECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCEEEEEECHHHHHHHHCCCCCCC
GKSYDSFAPMGPTFISADELGDGSGIPLELKVNGEVRQSGNTDGLIWPVPRLIAYVSRFM
CCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHH
TLWPGDVVSTGTPGGVGMGMKPPVYLKPGDVVEWGSPAFGFASQAVVIDDEG
HHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKIRFYLNDQAERIMALWSESRGEYLAADSVLAEADACICGETGSCGEEMKRIVAFLDSA
CEEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
AAKAVNPEWMIDTALPCSPSKLVCLGKSYADHAKEFDGDSVQEPAVFLKSPSAITSCSDV
HHHCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCCE
VLYPPGCDKLDYEIELAVVIKDVLKNASPEEAARAISGYTLMCDYSERANQLEHGGQWTK
EEECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCEEEEEECHHHHHHHHCCCCCCC
GKSYDSFAPMGPTFISADELGDGSGIPLELKVNGEVRQSGNTDGLIWPVPRLIAYVSRFM
CCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHH
TLWPGDVVSTGTPGGVGMGMKPPVYLKPGDVVEWGSPAFGFASQAVVIDDEG
HHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA