| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734575
Identifier: 187734575
GI number: 187734575
Start: 80688
End: 83234
Strand: Direct
Name: 187734575
Synonym: Amuc_0060
Alternate gene names: NA
Gene position: 80688-83234 (Clockwise)
Preceding gene: 187734574
Following gene: 187734576
Centisome position: 3.03
GC content: 54.61
Gene sequence:
>2547_bases ATGATCTCATCCTTTCCCAGAATTCTGATCTTTCTGATGATGGCAAGCCTGCATGTATTCGCGGAAGACATGCAGAAAAA CAGGGAACGGGAAGCCGCCCGCGCAGTCATCATGCGGACCGTGCCGTCTCTGGCCGCCTCCCCGGAAAAACTGCACCTGG AAACCATTGAAAAAGAAGACGGATATGATGTTTTCGAGACGAAAGCCTCCGGAGGAGTGCTGACGATCCGGGGAAGCAGC GGCACAGCCCTTTGCCGGGGATTCTATGATTTTCTGAAAACGAACCGTCTGGGAATGGTATCCTGGGAAAACAAAGACAT TCGCTGGCCGGCACAGCTGCCGGACACCGCGCCGCGCCGCATCGTTTCTCCTTTCCGCAACCACTATTATTTCAATGTGG TCACCTATGGATACACGATGCCCTACTGGACCTGGGAACGCTGGGAAAAGGAAATAGACTGGATGGCTCTGCACGGCATC AACATGCCCCTGGCTCTGGTTGCCACGGAGGGGATCGCCGTCCGGGTCTGGAAGCAACTGGGGCTGACGGAAAAAGAAAT AGAAGAATTTTACACGGGGCCGGCCCATCTTCCCTGGCAGCGGATGGGAAACATCGTCAATCATGACGGCCCCCTGCCCG CCAGCTGGCACAAGGAACAAATCGCCCTGCAGCACCGCATCCTGCACAGGATGAAATCCTTGGGCATGACCCCCATTTGT CCCGCTTTTTCCGGTTTCGTTCCCCGGGGAATCCTCCGCCTTTATCCGGAAGCGAAGCTTCACCGGCTGGGGTGGGGAGG CTGGCCTCAAAAAAACCACGCCCATTTTCTTTCTCCGGAAGAGCCCCTTTTCCTTAAAATAGGACGCCTGTACATGCAGG AATGGCAGAAGGAATTCGGAAAAAACACCTATTTTCTTGCGGACTCCTTCAATGAAATGGAACTTCCCGAAAACAAAGGA GGCGTCGAAGCCCGCAACAATATGCTCAGCTCCCTCGGGGAACAAATCTACCGCTCCATTTCCTCCACCAACCCGGATGC GGTATGGGTCATGCAGGGATGGATGTTCGGATACCAGCGCAATATCTGGAACGCAGATACTCTGAAGGCTTTGCTCAGCA AGGTTCCGGACGATAAGATGCTCCTTCTGGACCTGGCGGCGGATTACAACAAGACTTTCTGGCGCAACGGCATGAACTGG GACGTCTTCAAGGGTTTTTTCAATAAACCGTGGGTTTACAGCGTGGTTCCCAACATGGGCGGCAAATGCGCCATGACCGG GGTAATGGATTTTTACGCCAACGGCCATCTGGAAGCCTTGAACTCTTCATCCAGGGGGCGCCTCTCCGGAATGGGCATGG CCCCGGAAGGAATAGAAAATAACGATGTGATCTACGAACTGATCACGGATGCCGCATGGAGGAACCGCCAGGAAAACGTG GAACAATATCTGGAAAATTATTGCCGTGCCCGATACGGAAATTATCCGGACAGCATGAAGGAAGCCTGGAATCTGTTCCG CCGCACAGCCTATTCCAACTTAAAGGACCATCCCCGTTTCAACTGGCAAATGAAACCCGGCACCCGCGGCTGTTCCGTAA ACACAAGCGAAGATTTTCTGAAAGGCCTCTCCCTGTTCGTCAACACCCGCGGCCTGGAACAATCCCCCCTGTTCCGCCAG GATGCCGTTGAGATGGCAGTCCATTATCTTGGCATACGCATGAATGAAGCCATCCGGGCCGCCCAGGAAGCTCTGGACGA ACAGGATCAGGAAAACGCGGAAAAATGCATGGCCTATTTCCGCAAATACGCCCTTCTGGCAGATTCCCTTCTGGAAGGGC ACCCCACCTGGAGGCTGTCGCGCTGGATATCGTTTGCCCGGTCTCACGGAACTTCTCCTGAGGAAAAAAACAAGTATGAA CAAAACGCCAGAAGGCTGGTGACCAGATGGGGGCCTCCCGTAGACGACTACGCCGCCAAAATATGGAGCGGCCTTATCAG GGACTACTATCTGCCGCGCTGGGAACACTTTATTCAGAGCCGTCTTTCCGAAAAAAATCCGGATATGGGAGCATGGGAGG AAAAATGGGTCCGTTCCACTGGCGTAAGCGCTGCGCACGCTCCCGGAGATCTGGTCAACGCCTGCCGCCAGGCTATCCGG GAGGCGCCGCCCCTGCCTTCTTCCCTGAAAAGAAAAGCAGCCGGATCAATTATAGGAAACTGGACCTCCGCGACGGTATC CACGGAATGGAGTTATCTGGACTGGCCCGTTTCTTCCGCTGATCTTGAAAAACTCCGGGGGGTGCGCTTCGTCTTCACTT CCGGCAGCCATGCCCTAGAAATAGACGGCGTCGAACTCCTGGAAAACGGCAAAGTAATCGCCCACGACCGGCACGCCGGA TTGGCAGGCAAGCCTTCCCGCGGGAATTTCTACAAACTTTCCCTTCCCAAGGGAATCCATGCCAACAACGGATGCTCCCT CAGAGCCAGGGTCCGCTCCGTGGGCGGAAAATCCTCCAATGGGAAACTGGAACTGATTAAAGAATGA
Upstream 100 bases:
>100_bases GCATGTTGACATGCAGGGGCCTTTTCATTGGGCCGGATTCCGCGGAACTGCCATTTCCATCCCCTGAAAGGACAATGACC CTCCCTGCGTATTTACGGGC
Downstream 100 bases:
>100_bases ACGGCTTAAATTCAGTTAGAATTATCCACTTTAGGTTTGACAAATATCACCAAAATTAACTTATAAATAGTCATAAATTA TTTTGAATTAAAATAGATCT
Product: Alpha-N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; Truncated N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MISSFPRILIFLMMASLHVFAEDMQKNREREAARAVIMRTVPSLAASPEKLHLETIEKEDGYDVFETKASGGVLTIRGSS GTALCRGFYDFLKTNRLGMVSWENKDIRWPAQLPDTAPRRIVSPFRNHYYFNVVTYGYTMPYWTWERWEKEIDWMALHGI NMPLALVATEGIAVRVWKQLGLTEKEIEEFYTGPAHLPWQRMGNIVNHDGPLPASWHKEQIALQHRILHRMKSLGMTPIC PAFSGFVPRGILRLYPEAKLHRLGWGGWPQKNHAHFLSPEEPLFLKIGRLYMQEWQKEFGKNTYFLADSFNEMELPENKG GVEARNNMLSSLGEQIYRSISSTNPDAVWVMQGWMFGYQRNIWNADTLKALLSKVPDDKMLLLDLAADYNKTFWRNGMNW DVFKGFFNKPWVYSVVPNMGGKCAMTGVMDFYANGHLEALNSSSRGRLSGMGMAPEGIENNDVIYELITDAAWRNRQENV EQYLENYCRARYGNYPDSMKEAWNLFRRTAYSNLKDHPRFNWQMKPGTRGCSVNTSEDFLKGLSLFVNTRGLEQSPLFRQ DAVEMAVHYLGIRMNEAIRAAQEALDEQDQENAEKCMAYFRKYALLADSLLEGHPTWRLSRWISFARSHGTSPEEKNKYE QNARRLVTRWGPPVDDYAAKIWSGLIRDYYLPRWEHFIQSRLSEKNPDMGAWEEKWVRSTGVSAAHAPGDLVNACRQAIR EAPPLPSSLKRKAAGSIIGNWTSATVSTEWSYLDWPVSSADLEKLRGVRFVFTSGSHALEIDGVELLENGKVIAHDRHAG LAGKPSRGNFYKLSLPKGIHANNGCSLRARVRSVGGKSSNGKLELIKE
Sequences:
>Translated_848_residues MISSFPRILIFLMMASLHVFAEDMQKNREREAARAVIMRTVPSLAASPEKLHLETIEKEDGYDVFETKASGGVLTIRGSS GTALCRGFYDFLKTNRLGMVSWENKDIRWPAQLPDTAPRRIVSPFRNHYYFNVVTYGYTMPYWTWERWEKEIDWMALHGI NMPLALVATEGIAVRVWKQLGLTEKEIEEFYTGPAHLPWQRMGNIVNHDGPLPASWHKEQIALQHRILHRMKSLGMTPIC PAFSGFVPRGILRLYPEAKLHRLGWGGWPQKNHAHFLSPEEPLFLKIGRLYMQEWQKEFGKNTYFLADSFNEMELPENKG GVEARNNMLSSLGEQIYRSISSTNPDAVWVMQGWMFGYQRNIWNADTLKALLSKVPDDKMLLLDLAADYNKTFWRNGMNW DVFKGFFNKPWVYSVVPNMGGKCAMTGVMDFYANGHLEALNSSSRGRLSGMGMAPEGIENNDVIYELITDAAWRNRQENV EQYLENYCRARYGNYPDSMKEAWNLFRRTAYSNLKDHPRFNWQMKPGTRGCSVNTSEDFLKGLSLFVNTRGLEQSPLFRQ DAVEMAVHYLGIRMNEAIRAAQEALDEQDQENAEKCMAYFRKYALLADSLLEGHPTWRLSRWISFARSHGTSPEEKNKYE QNARRLVTRWGPPVDDYAAKIWSGLIRDYYLPRWEHFIQSRLSEKNPDMGAWEEKWVRSTGVSAAHAPGDLVNACRQAIR EAPPLPSSLKRKAAGSIIGNWTSATVSTEWSYLDWPVSSADLEKLRGVRFVFTSGSHALEIDGVELLENGKVIAHDRHAG LAGKPSRGNFYKLSLPKGIHANNGCSLRARVRSVGGKSSNGKLELIKE >Mature_848_residues MISSFPRILIFLMMASLHVFAEDMQKNREREAARAVIMRTVPSLAASPEKLHLETIEKEDGYDVFETKASGGVLTIRGSS GTALCRGFYDFLKTNRLGMVSWENKDIRWPAQLPDTAPRRIVSPFRNHYYFNVVTYGYTMPYWTWERWEKEIDWMALHGI NMPLALVATEGIAVRVWKQLGLTEKEIEEFYTGPAHLPWQRMGNIVNHDGPLPASWHKEQIALQHRILHRMKSLGMTPIC PAFSGFVPRGILRLYPEAKLHRLGWGGWPQKNHAHFLSPEEPLFLKIGRLYMQEWQKEFGKNTYFLADSFNEMELPENKG GVEARNNMLSSLGEQIYRSISSTNPDAVWVMQGWMFGYQRNIWNADTLKALLSKVPDDKMLLLDLAADYNKTFWRNGMNW DVFKGFFNKPWVYSVVPNMGGKCAMTGVMDFYANGHLEALNSSSRGRLSGMGMAPEGIENNDVIYELITDAAWRNRQENV EQYLENYCRARYGNYPDSMKEAWNLFRRTAYSNLKDHPRFNWQMKPGTRGCSVNTSEDFLKGLSLFVNTRGLEQSPLFRQ DAVEMAVHYLGIRMNEAIRAAQEALDEQDQENAEKCMAYFRKYALLADSLLEGHPTWRLSRWISFARSHGTSPEEKNKYE QNARRLVTRWGPPVDDYAAKIWSGLIRDYYLPRWEHFIQSRLSEKNPDMGAWEEKWVRSTGVSAAHAPGDLVNACRQAIR EAPPLPSSLKRKAAGSIIGNWTSATVSTEWSYLDWPVSSADLEKLRGVRFVFTSGSHALEIDGVELLENGKVIAHDRHAG LAGKPSRGNFYKLSLPKGIHANNGCSLRARVRSVGGKSSNGKLELIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=645, Percent_Identity=34.7286821705426, Blast_Score=374, Evalue=1e-103, Organism=Caenorhabditis elegans, GI32564213, Length=571, Percent_Identity=29.7723292469352, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI21356587, Length=685, Percent_Identity=28.7591240875912, Blast_Score=293, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96970; Mature: 96970
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSFPRILIFLMMASLHVFAEDMQKNREREAARAVIMRTVPSLAASPEKLHLETIEKED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCC GYDVFETKASGGVLTIRGSSGTALCRGFYDFLKTNRLGMVSWENKDIRWPAQLPDTAPRR CCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHH IVSPFRNHYYFNVVTYGYTMPYWTWERWEKEIDWMALHGINMPLALVATEGIAVRVWKQL HHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHH GLTEKEIEEFYTGPAHLPWQRMGNIVNHDGPLPASWHKEQIALQHRILHRMKSLGMTPIC CCCHHHHHHHHCCCCCCCHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PAFSGFVPRGILRLYPEAKLHRLGWGGWPQKNHAHFLSPEEPLFLKIGRLYMQEWQKEFG HHHHCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC KNTYFLADSFNEMELPENKGGVEARNNMLSSLGEQIYRSISSTNPDAVWVMQGWMFGYQR CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHC NIWNADTLKALLSKVPDDKMLLLDLAADYNKTFWRNGMNWDVFKGFFNKPWVYSVVPNMG CCCCHHHHHHHHHHCCCCCEEEEEHHHHHCHHHHCCCCCHHHHHHHCCCCEEEEECCCCC GKCAMTGVMDFYANGHLEALNSSSRGRLSGMGMAPEGIENNDVIYELITDAAWRNRQENV CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH EQYLENYCRARYGNYPDSMKEAWNLFRRTAYSNLKDHPRFNWQMKPGTRGCSVNTSEDFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH KGLSLFVNTRGLEQSPLFRQDAVEMAVHYLGIRMNEAIRAAQEALDEQDQENAEKCMAYF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKYALLADSLLEGHPTWRLSRWISFARSHGTSPEEKNKYEQNARRLVTRWGPPVDDYAAK HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IWSGLIRDYYLPRWEHFIQSRLSEKNPDMGAWEEKWVRSTGVSAAHAPGDLVNACRQAIR HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH EAPPLPSSLKRKAAGSIIGNWTSATVSTEWSYLDWPVSSADLEKLRGVRFVFTSGSHALE HCCCCCHHHHHHHCCCHHCCCCCCEEECCCCEECCCCCHHHHHHHCCEEEEEECCCCEEE IDGVELLENGKVIAHDRHAGLAGKPSRGNFYKLSLPKGIHANNGCSLRARVRSVGGKSSN ECCHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCC GKLELIKE CCEEEECC >Mature Secondary Structure MISSFPRILIFLMMASLHVFAEDMQKNREREAARAVIMRTVPSLAASPEKLHLETIEKED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCC GYDVFETKASGGVLTIRGSSGTALCRGFYDFLKTNRLGMVSWENKDIRWPAQLPDTAPRR CCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHH IVSPFRNHYYFNVVTYGYTMPYWTWERWEKEIDWMALHGINMPLALVATEGIAVRVWKQL HHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHH GLTEKEIEEFYTGPAHLPWQRMGNIVNHDGPLPASWHKEQIALQHRILHRMKSLGMTPIC CCCHHHHHHHHCCCCCCCHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PAFSGFVPRGILRLYPEAKLHRLGWGGWPQKNHAHFLSPEEPLFLKIGRLYMQEWQKEFG HHHHCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC KNTYFLADSFNEMELPENKGGVEARNNMLSSLGEQIYRSISSTNPDAVWVMQGWMFGYQR CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHC NIWNADTLKALLSKVPDDKMLLLDLAADYNKTFWRNGMNWDVFKGFFNKPWVYSVVPNMG CCCCHHHHHHHHHHCCCCCEEEEEHHHHHCHHHHCCCCCHHHHHHHCCCCEEEEECCCCC GKCAMTGVMDFYANGHLEALNSSSRGRLSGMGMAPEGIENNDVIYELITDAAWRNRQENV CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH EQYLENYCRARYGNYPDSMKEAWNLFRRTAYSNLKDHPRFNWQMKPGTRGCSVNTSEDFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH KGLSLFVNTRGLEQSPLFRQDAVEMAVHYLGIRMNEAIRAAQEALDEQDQENAEKCMAYF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKYALLADSLLEGHPTWRLSRWISFARSHGTSPEEKNKYEQNARRLVTRWGPPVDDYAAK HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IWSGLIRDYYLPRWEHFIQSRLSEKNPDMGAWEEKWVRSTGVSAAHAPGDLVNACRQAIR HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH EAPPLPSSLKRKAAGSIIGNWTSATVSTEWSYLDWPVSSADLEKLRGVRFVFTSGSHALE HCCCCCHHHHHHHCCCHHCCCCCCEEECCCCEECCCCCHHHHHHHCCEEEEEECCCCEEE IDGVELLENGKVIAHDRHAGLAGKPSRGNFYKLSLPKGIHANNGCSLRARVRSVGGKSSN ECCHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCC GKLELIKE CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA