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The map label for this gene is recJ [H]

Identifier: 187734566

GI number: 187734566

Start: 68018

End: 69757

Strand: Reverse

Name: recJ [H]

Synonym: Amuc_0051

Alternate gene names: 187734566

Gene position: 69757-68018 (Counterclockwise)

Preceding gene: 187734567

Following gene: 187734565

Centisome position: 2.62

GC content: 58.91

Gene sequence:

>1740_bases
ATGACGCCGGGTTTTCATTGGACTCTACGCCCTTCCGTGAAGGAGGATGATCCGGTCTTGAAAGCGTTTCCTGCGGAACT
GCCCCTGCTGGTCAAGCAGCTCCTGCTGCAGCGCGGCTTCACCGGGGGAATGGAAACGGAACTCTTTCTGGACCCCAGGC
TCTCCCACCTGAGCGACCCTTTCCTGATGGGGGAAATGAGGGCTGCCGTGGACCGCATTTTCCGGGCCGTGGATGAAGGG
GAAACCGTGTGCATTTATGGGGACTATGATGTGGACGGTGTCACCTCCGTGGCGCTTCTCCGGGCCATTTTGATGGCTTA
TGACCTGGATCCCCAGTATTTTATTCCCGTCCGTTCCCGGGAAGGCTACGGACTCAGCGAGGCCGGCATCAAGCGTTGCC
TTTGCGAATGTGCGGACCCTCCCAGCCTGCTTATTACGGTGGACTGCGGCACTTCCTCCGTGAAGGAGGTGGACATGCTT
AACAGTCTGGGGATAGACGTAATCATTCTGGATCACCATGAGGCGGGCCCTTTGGGGCGTCCGGATGCAGCGGCGGTGGT
CAATGCCAAAATTGAGGAAAACAGCCCATATACTTATCTGTGCAGCGCGGGCGTAGTCTTCAAGCTGGCGCATGCCCTCC
TGAAGGAGCGGAAACTGAAAACCTTTGACCTGAAACTTTATCTGGACCTGGTGGCCGTGGCAACCGTGGCGGACATTGTT
CCCCTGGTGGCGGAAAACAGGATTCTGGTTCGCCACGGCCTGGGCAGGCTGGCGCACAGCCGCCATACGGGCCTCAAAAC
CCTGACGGAAATAGCGGGCATCCGACCTTCCGACTCCGTCAACCACGCGGGCTTCCTGAACGCCGCCCACGTGGGGTTCA
GGATAGGCCCGCGCATTAATGCCGCCGGGCGCATGGATTCCCCCATGGATGCGTTGGAACTCCTGCTGACCATGGATGCC
AGGAGGGCCGTGCAGCTTGCCCAAATGCTGGATTCCCACAACCGCAAGCGGCAGGAGGAAGAGGAGGCCATCCGGACGGA
TGCGGTGGAAATGCTTCATAACTCCTTTGACCCGGAGAGGGATAACGTCATTGTGCTGGGTTCCCGCGCGTGGCATCCCG
GCGTGGTGGGCATTGTAGCCTCCCAGCTGATGAGGCGGTACCACAAGCCGACCTTCGTCATCGCCTTTGACGAAAGCGGC
GTGGGGAAGGGCTCCGGCCGTTCCATTCCCGGCGTGTCCCTGGTGCAGGCCATTCACCATTGTGCGGATACGCTGGTTTC
CGGCGGCGGCCATGACATGGCGGCGGGGCTGGTGATTGAAGAATCCCGCATGGACGATTTCCGCCGGGCATTCAACCGTT
ATGTGTCTGAAACCACGACGGAGGAACAGCGCAGCCCCGTGCTCAACATAGACATGGAAGTGTCCTTCCAGGCGTTGACG
CTGGATTTGCTGGACAGCTATGAAAAGCTGGAACCTTTCGGCAACTCCAATCCACAGCCTCTCTTCATGAGTTCCGACGT
TTTTCCCACGGAACCGCCCAAGCGCGTGGGAACCAATCATCTGAAGCTTTTCATGCGCCAGGGCATCGTGGAGCGTGACG
CTATTTTCTTCAACGGAGCGGAACGGGAGCTTCCCAATCCTCCCTGGGATATCGCTTTCACGATTGACCGCAACGTGTAC
CGCGGCCGCGCCTCCCTGTCCATTTCCATTCAGGAAATACGTTCCCACCGGGAAATGTAG

Upstream 100 bases:

>100_bases
ACTGTTTCCGGAAACGGAAGCGGACGCTTCTTTTCTCCGCTTTGGCCGTCTGTTGCGGAAACAACCTTGACCCTGTTGGA
TGCGGGGCTAAAATACTGCC

Downstream 100 bases:

>100_bases
AAAACGGCCTATTGCTGTGAATAGCAATAGGCCGTTGAGTTGTGAATAATGTGTCAAACCTTATCCTATGGTAATCTTAA
TAGATTGTTATTAGGCGTAT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MTPGFHWTLRPSVKEDDPVLKAFPAELPLLVKQLLLQRGFTGGMETELFLDPRLSHLSDPFLMGEMRAAVDRIFRAVDEG
ETVCIYGDYDVDGVTSVALLRAILMAYDLDPQYFIPVRSREGYGLSEAGIKRCLCECADPPSLLITVDCGTSSVKEVDML
NSLGIDVIILDHHEAGPLGRPDAAAVVNAKIEENSPYTYLCSAGVVFKLAHALLKERKLKTFDLKLYLDLVAVATVADIV
PLVAENRILVRHGLGRLAHSRHTGLKTLTEIAGIRPSDSVNHAGFLNAAHVGFRIGPRINAAGRMDSPMDALELLLTMDA
RRAVQLAQMLDSHNRKRQEEEEAIRTDAVEMLHNSFDPERDNVIVLGSRAWHPGVVGIVASQLMRRYHKPTFVIAFDESG
VGKGSGRSIPGVSLVQAIHHCADTLVSGGGHDMAAGLVIEESRMDDFRRAFNRYVSETTTEEQRSPVLNIDMEVSFQALT
LDLLDSYEKLEPFGNSNPQPLFMSSDVFPTEPPKRVGTNHLKLFMRQGIVERDAIFFNGAERELPNPPWDIAFTIDRNVY
RGRASLSISIQEIRSHREM

Sequences:

>Translated_579_residues
MTPGFHWTLRPSVKEDDPVLKAFPAELPLLVKQLLLQRGFTGGMETELFLDPRLSHLSDPFLMGEMRAAVDRIFRAVDEG
ETVCIYGDYDVDGVTSVALLRAILMAYDLDPQYFIPVRSREGYGLSEAGIKRCLCECADPPSLLITVDCGTSSVKEVDML
NSLGIDVIILDHHEAGPLGRPDAAAVVNAKIEENSPYTYLCSAGVVFKLAHALLKERKLKTFDLKLYLDLVAVATVADIV
PLVAENRILVRHGLGRLAHSRHTGLKTLTEIAGIRPSDSVNHAGFLNAAHVGFRIGPRINAAGRMDSPMDALELLLTMDA
RRAVQLAQMLDSHNRKRQEEEEAIRTDAVEMLHNSFDPERDNVIVLGSRAWHPGVVGIVASQLMRRYHKPTFVIAFDESG
VGKGSGRSIPGVSLVQAIHHCADTLVSGGGHDMAAGLVIEESRMDDFRRAFNRYVSETTTEEQRSPVLNIDMEVSFQALT
LDLLDSYEKLEPFGNSNPQPLFMSSDVFPTEPPKRVGTNHLKLFMRQGIVERDAIFFNGAERELPNPPWDIAFTIDRNVY
RGRASLSISIQEIRSHREM
>Mature_578_residues
TPGFHWTLRPSVKEDDPVLKAFPAELPLLVKQLLLQRGFTGGMETELFLDPRLSHLSDPFLMGEMRAAVDRIFRAVDEGE
TVCIYGDYDVDGVTSVALLRAILMAYDLDPQYFIPVRSREGYGLSEAGIKRCLCECADPPSLLITVDCGTSSVKEVDMLN
SLGIDVIILDHHEAGPLGRPDAAAVVNAKIEENSPYTYLCSAGVVFKLAHALLKERKLKTFDLKLYLDLVAVATVADIVP
LVAENRILVRHGLGRLAHSRHTGLKTLTEIAGIRPSDSVNHAGFLNAAHVGFRIGPRINAAGRMDSPMDALELLLTMDAR
RAVQLAQMLDSHNRKRQEEEEAIRTDAVEMLHNSFDPERDNVIVLGSRAWHPGVVGIVASQLMRRYHKPTFVIAFDESGV
GKGSGRSIPGVSLVQAIHHCADTLVSGGGHDMAAGLVIEESRMDDFRRAFNRYVSETTTEEQRSPVLNIDMEVSFQALTL
DLLDSYEKLEPFGNSNPQPLFMSSDVFPTEPPKRVGTNHLKLFMRQGIVERDAIFFNGAERELPNPPWDIAFTIDRNVYR
GRASLSISIQEIRSHREM

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=580, Percent_Identity=34.8275862068965, Blast_Score=245, Evalue=5e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64213; Mature: 64082

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGFHWTLRPSVKEDDPVLKAFPAELPLLVKQLLLQRGFTGGMETELFLDPRLSHLSDP
CCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCC
FLMGEMRAAVDRIFRAVDEGETVCIYGDYDVDGVTSVALLRAILMAYDLDPQYFIPVRSR
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
EGYGLSEAGIKRCLCECADPPSLLITVDCGTSSVKEVDMLNSLGIDVIILDHHEAGPLGR
CCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC
PDAAAVVNAKIEENSPYTYLCSAGVVFKLAHALLKERKLKTFDLKLYLDLVAVATVADIV
CCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
PLVAENRILVRHGLGRLAHSRHTGLKTLTEIAGIRPSDSVNHAGFLNAAHVGFRIGPRIN
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCCC
AAGRMDSPMDALELLLTMDARRAVQLAQMLDSHNRKRQEEEEAIRTDAVEMLHNSFDPER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNVIVLGSRAWHPGVVGIVASQLMRRYHKPTFVIAFDESGVGKGSGRSIPGVSLVQAIHH
CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
CADTLVSGGGHDMAAGLVIEESRMDDFRRAFNRYVSETTTEEQRSPVLNIDMEVSFQALT
HHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEEHHHH
LDLLDSYEKLEPFGNSNPQPLFMSSDVFPTEPPKRVGTNHLKLFMRQGIVERDAIFFNGA
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHCHHHHHHHHHHCCCCCCEEEECCC
ERELPNPPWDIAFTIDRNVYRGRASLSISIQEIRSHREM
CCCCCCCCCCEEEEEECCEECCCCEEEEEHHHHHHHCCC
>Mature Secondary Structure 
TPGFHWTLRPSVKEDDPVLKAFPAELPLLVKQLLLQRGFTGGMETELFLDPRLSHLSDP
CCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCC
FLMGEMRAAVDRIFRAVDEGETVCIYGDYDVDGVTSVALLRAILMAYDLDPQYFIPVRSR
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
EGYGLSEAGIKRCLCECADPPSLLITVDCGTSSVKEVDMLNSLGIDVIILDHHEAGPLGR
CCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC
PDAAAVVNAKIEENSPYTYLCSAGVVFKLAHALLKERKLKTFDLKLYLDLVAVATVADIV
CCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
PLVAENRILVRHGLGRLAHSRHTGLKTLTEIAGIRPSDSVNHAGFLNAAHVGFRIGPRIN
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCCC
AAGRMDSPMDALELLLTMDARRAVQLAQMLDSHNRKRQEEEEAIRTDAVEMLHNSFDPER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNVIVLGSRAWHPGVVGIVASQLMRRYHKPTFVIAFDESGVGKGSGRSIPGVSLVQAIHH
CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
CADTLVSGGGHDMAAGLVIEESRMDDFRRAFNRYVSETTTEEQRSPVLNIDMEVSFQALT
HHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEEHHHH
LDLLDSYEKLEPFGNSNPQPLFMSSDVFPTEPPKRVGTNHLKLFMRQGIVERDAIFFNGA
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHCHHHHHHHHHHCCCCCCEEEECCC
ERELPNPPWDIAFTIDRNVYRGRASLSISIQEIRSHREM
CCCCCCCCCCEEEEEECCEECCCCEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]