| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734542
Identifier: 187734542
GI number: 187734542
Start: 33610
End: 34827
Strand: Direct
Name: 187734542
Synonym: Amuc_0026
Alternate gene names: NA
Gene position: 33610-34827 (Clockwise)
Preceding gene: 187734541
Following gene: 187734549
Centisome position: 1.26
GC content: 56.16
Gene sequence:
>1218_bases ATGCTTCATCACATCAATCCCGTTTCCGGCCTGCTGGCCGCAGCCCTCTTCCTGTCCGCCCCTGTTCAGGCGGCCCTCCC CGTTTACAGCGCCGTGAAAGACGAGGCGAAAACCGTCAATAAATACATGATCGTCGTATGGGCCGGCACGGACTGGTCCC CAAAATCACGTGAAATCACCCGCGCTGTGGAACACCTGGCCAAGAACTCCCCGGAACCCGTGCTCTGGTGTATCCAGGAC GAGCGTGAGGAAATGACGGAAGAAGAGCAGAAACTGCCCAAGCCCCCGGGGGAAATCTGGAACATCCCCGCCATTCAGGT GGTCTCCCCCACCGGAAACATGGTATTCCTGTCGGAAGGTGTCTCCAGGGAAACATTGCCAGCCGTCATGAAGCAGGCAA TGGAAGCCGTAAAACAGCAAAACAAGGCCAATGCCCTGTGGGAAAAAGCCGCCGCTTCATCCGGAACGGCCGCGGCCCTT CTTTACGGAGAAGGGCTTCAGCAGCTTCCTCCTTATGCGGCCTCTTCCAGAAAGGATATTCTGGAAAAAATCAAGAAGGC GGATCCGGAAGACATCAAGGGAGTGCACTTCAAATACACGTTCAGGCATCTGCCCTACATCGAAAAAGTGCAGAGAATGG TGAATGATTCCGCCAAAGACGGCGGTCCAAAGGATTACAAAACCGCCCATGCCTATGTAAACAAACAGCTCAAAACCCCC GGCCTGACTCCCCTTCAAAAACAACAGGTCATGGCGGCCAGGTTCTGGCTCTACCGCAATGAAGGGAAAAAGGACCAGGC GCTGAAGACCCTGACGGACATCGCCAGGATATCCCCTAAAACCCTCATGGGAATAGGCGCCCAGAACTACTACCGCTACC TGACGGAACCCGTCACCCTGAAAAGTCCTCACTTCACAGGCTACGACCTGCGTCCGGAACTGACGCCTACCCGCGTCAAC GTCAGCAGCATGCTTGACGGCCCCGGAAACTACAAGATTACCTTCAAGATGAACAGCGGCGGCTGCAATATCCGCAACCC CCGCTTCATGAAGGGCAACCGCGTAGTCAGCGAACTGCCCAAGGACCGGCAGGACAAAAACGGGCGCGAATTCACCCTGC GCCTCTCCGGTTCCGAAAAGCCGGACTTGGTTTTCGACTGCCAGGGCCAGGGATGGTTCGATGCGGACTGCGACATCATC GTGACCAAGGAATCCTGA
Upstream 100 bases:
>100_bases AAAGCCAAGTGGATCAAGGTGGAAGCCAAAAACGCACAGCCGGAATTCATGCACCTGCGCCATATCCTCGTTTACGAAAA ATAAATTCTCCATTAACGCC
Downstream 100 bases:
>100_bases CTCCTGCCGGCAAACGAACAAAACCGCCATTCACAACCTTCACGAAGGCAGGACATTCCCAAGGAATTTCCTGCCTTTTT TCCGATGGGAGAAGAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII VTKES
Sequences:
>Translated_405_residues MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII VTKES >Mature_405_residues MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII VTKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45322; Mature: 45322
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREIT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH RAVEHLAKNSPEPVLWCIQDEREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEG HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC VSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAALLYGEGLQQLPPYAASSRKDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCHHHHH LEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP HHHHHCCCCCHHCCEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTL CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCEEE KSPHFTGYDLRPELTPTRVNVSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELP CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHCC KDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDIIVTKES CCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREIT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH RAVEHLAKNSPEPVLWCIQDEREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEG HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC VSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAALLYGEGLQQLPPYAASSRKDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCHHHHH LEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP HHHHHCCCCCHHCCEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTL CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCEEE KSPHFTGYDLRPELTPTRVNVSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELP CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHCC KDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDIIVTKES CCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA