The gene/protein map for NC_003909 is currently unavailable.
Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is yebN [C]

Identifier: 187734540

GI number: 187734540

Start: 30657

End: 31256

Strand: Direct

Name: yebN [C]

Synonym: Amuc_0024

Alternate gene names: 187734540

Gene position: 30657-31256 (Clockwise)

Preceding gene: 187734539

Following gene: 187734541

Centisome position: 1.15

GC content: 60.33

Gene sequence:

>600_bases
ATGAGCATGCCGCTTGCCGACTTGATCTTCCTGGCTTTTGCCCTCTCCGTGGACGCTTTCGTCGTGGCGTTCTCCTACGG
CCTGCTCATTAAGCAAAAGCGTTTGAGCAACGGAATCAAGCTCTCCCTGTCCACCGGGGCCGGTCAATTCCTGATGCCCG
TCCTGGGTTTTCTGCTTACAGGCTCCGTGCACCGGTATATTGCGGCCTGGGACCACTGGCTGGGCTTCGCCGTGTTCACC
TTCCTCGGGGTCAACGTCCTCCGCGAAGGCTGGAATCACCGCAACGAAGAAGAGGATATGCCCCACGTCACCAGCCTGAC
GTTTCCTACCCTTATGGCCGTGGGAATCGCCACCAGCATCGACGCGCTGGTAGCGGGCATCAGCATTTACCTTTCATCCG
CCCAGTGTGGAACCGACCCTACCCTCCACGCGGTGCTTCTCCCCGCCGCCGCCATCGGCTTCACCACCTTCCTGTGCACG
GCGGCCGGCTTTTTCCTGACCAGACGGCTGCACCGCTTTCCGACCTTTCATCTGGAAGCGGGAGCCGGGCTCATCCTCAT
CGGCCTGGGCGTCAAAATGCTCTGTGACCATTTGTGCTGA

Upstream 100 bases:

>100_bases
AATCCAGCCGACCCGCCTGTGCCGCATTTGGAATCAGGAAAAAGCGCAAGGAACAAAAAAATTGCTTTTTCCCGGGGATA
TCCTAGAGTGCCTCTCCGCA

Downstream 100 bases:

>100_bases
AATATGCCGCGAAGGATGATAAAAACGTCCTTCTGGCATCGTAATAAGTCGAAAAACGCACTGGTTCCCTCCCACCTCTT
TCTGCTATTATCAAGTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSMPLADLIFLAFALSVDAFVVAFSYGLLIKQKRLSNGIKLSLSTGAGQFLMPVLGFLLTGSVHRYIAAWDHWLGFAVFT
FLGVNVLREGWNHRNEEEDMPHVTSLTFPTLMAVGIATSIDALVAGISIYLSSAQCGTDPTLHAVLLPAAAIGFTTFLCT
AAGFFLTRRLHRFPTFHLEAGAGLILIGLGVKMLCDHLC

Sequences:

>Translated_199_residues
MSMPLADLIFLAFALSVDAFVVAFSYGLLIKQKRLSNGIKLSLSTGAGQFLMPVLGFLLTGSVHRYIAAWDHWLGFAVFT
FLGVNVLREGWNHRNEEEDMPHVTSLTFPTLMAVGIATSIDALVAGISIYLSSAQCGTDPTLHAVLLPAAAIGFTTFLCT
AAGFFLTRRLHRFPTFHLEAGAGLILIGLGVKMLCDHLC
>Mature_198_residues
SMPLADLIFLAFALSVDAFVVAFSYGLLIKQKRLSNGIKLSLSTGAGQFLMPVLGFLLTGSVHRYIAAWDHWLGFAVFTF
LGVNVLREGWNHRNEEEDMPHVTSLTFPTLMAVGIATSIDALVAGISIYLSSAQCGTDPTLHAVLLPAAAIGFTTFLCTA
AGFFLTRRLHRFPTFHLEAGAGLILIGLGVKMLCDHLC

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family [H]

Homologues:

Organism=Escherichia coli, GI87081981, Length=195, Percent_Identity=27.6923076923077, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003810
- InterPro:   IPR022929 [H]

Pfam domain/function: PF02659 DUF204 [H]

EC number: NA

Molecular weight: Translated: 21502; Mature: 21370

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPLADLIFLAFALSVDAFVVAFSYGLLIKQKRLSNGIKLSLSTGAGQFLMPVLGFLLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
GSVHRYIAAWDHWLGFAVFTFLGVNVLREGWNHRNEEEDMPHVTSLTFPTLMAVGIATSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DALVAGISIYLSSAQCGTDPTLHAVLLPAAAIGFTTFLCTAAGFFLTRRLHRFPTFHLEA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GAGLILIGLGVKMLCDHLC
CCCEEEEHHCHHHHHHHCC
>Mature Secondary Structure 
SMPLADLIFLAFALSVDAFVVAFSYGLLIKQKRLSNGIKLSLSTGAGQFLMPVLGFLLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
GSVHRYIAAWDHWLGFAVFTFLGVNVLREGWNHRNEEEDMPHVTSLTFPTLMAVGIATSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DALVAGISIYLSSAQCGTDPTLHAVLLPAAAIGFTTFLCTAAGFFLTRRLHRFPTFHLEA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GAGLILIGLGVKMLCDHLC
CCCEEEEHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA