| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is pheA [H]
Identifier: 187734525
GI number: 187734525
Start: 11054
End: 12211
Strand: Direct
Name: pheA [H]
Synonym: Amuc_0009
Alternate gene names: 187734525
Gene position: 11054-12211 (Clockwise)
Preceding gene: 187734524
Following gene: 187734526
Centisome position: 0.41
GC content: 57.43
Gene sequence:
>1158_bases ATGGAGACCACGCACCACGGGGAGGACGCCTCTCCGGACAATCCCCCCAGGCAGCAAAAAAGCGGAAACACGGATGAACA GACCATCGCCCTGACAAAGGCGCGTCTGGCCATTGACGAGGTGGACGCCCGGATTGTAGAGCTGTTAAAAAAACGCGCCG AATGGGTGCATGAAGTCGGCCGCATTAAAAAGGAAAAAAATTCCCCCATCTTCGTTCCCGAACGGGAAACGGCCCTGCTC AACAAATTGAACCGCCTGAATGCGGGCGTGCTGCCGGAAGCCTCCCTCCAGGCTATTTACCGTGAAATCATTTCCTGCTC CTTCTTTCTGGAAGGCGGCCTGACCATTGCCTACCTGGGCCCCAAAGGAACCTGGAGCCACCAGGCGGCCCTCAAGCAGT TCGGAAAAAGTTGCGAACTCATTCCGTGCCAGAGCTTCAAGGACGTATTTGACATGGTGGACCGGGGGAAGGCCCAGTAC GGCGTAGTTCCCGTGGAAAACTCTTCGGAAGGTTCCGTCACCGCCGTGATGGATCTTTTCGTCACCTCTCCCCTCAAAAT CTGCGCCCAAATCAATCTGAACATCCGCAACAGCCTGATGGCGGATATTCCGCGGGAACACATCCGCATCCTGTATTCCC ACCCCCAGGTTCTCGGCCAGACGCGGAACTGGATCCAGCGGCATTTCCCAAACGCGGAACTCGTGGAAACGTCCTCCACC ACGAAAGCCAGCATTCTTGCCAAGGAGAACGCCGCCATGGGCGCGGCATCCCTCGGCTGTCCGCTGGCCGCGGAATTGTT CGGCCTGAACATCCTGGAAGAAGACGTGCAGGACCAGTCCTGCAACACCACCCGTTTTGCCGTCATCGGACGCCAGGAAA CGCAGCCCAGCGGCAGGGACCGCACCTCCCTGCTCATCCGCATCCAGCATAAACCCGGCACCCTGGCGGAAGTAGTCAAC TGCTTCCAGCGGCACAACAATAACCTGATACGCATTGAATCCCGCCCGTCCAAAGTCATCAACTGGGAATACGTCTTTTA CATAGATGCCGCCGGCCACATTCAGGAATCCCCCTTACGGGAAACCCTTCCGGAGCTGGAGCAGCACTGCTCCATGCTGA AGATTCTGGGCAGCTACGCGGATACGGACGTCATTTAA
Upstream 100 bases:
>100_bases GCAAGAAGAATCCGCGGCGGAGACCTCCCCTTTAATCTTGATTTGCCCCCCCGGAACCGCTACCCTGACACGGCTTTAAC CACACAGCTTTCACAGAGAC
Downstream 100 bases:
>100_bases GCAGGTTCAGCCTTCCCCCCCAGCCTCACACCATTCTGAACAACCATGAACATAGCCACGATTGCCGCCCTGGCCGTCAC TCTGGGACTTCCCGCCCCGG
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues METTHHGEDASPDNPPRQQKSGNTDEQTIALTKARLAIDEVDARIVELLKKRAEWVHEVGRIKKEKNSPIFVPERETALL NKLNRLNAGVLPEASLQAIYREIISCSFFLEGGLTIAYLGPKGTWSHQAALKQFGKSCELIPCQSFKDVFDMVDRGKAQY GVVPVENSSEGSVTAVMDLFVTSPLKICAQINLNIRNSLMADIPREHIRILYSHPQVLGQTRNWIQRHFPNAELVETSST TKASILAKENAAMGAASLGCPLAAELFGLNILEEDVQDQSCNTTRFAVIGRQETQPSGRDRTSLLIRIQHKPGTLAEVVN CFQRHNNNLIRIESRPSKVINWEYVFYIDAAGHIQESPLRETLPELEQHCSMLKILGSYADTDVI
Sequences:
>Translated_385_residues METTHHGEDASPDNPPRQQKSGNTDEQTIALTKARLAIDEVDARIVELLKKRAEWVHEVGRIKKEKNSPIFVPERETALL NKLNRLNAGVLPEASLQAIYREIISCSFFLEGGLTIAYLGPKGTWSHQAALKQFGKSCELIPCQSFKDVFDMVDRGKAQY GVVPVENSSEGSVTAVMDLFVTSPLKICAQINLNIRNSLMADIPREHIRILYSHPQVLGQTRNWIQRHFPNAELVETSST TKASILAKENAAMGAASLGCPLAAELFGLNILEEDVQDQSCNTTRFAVIGRQETQPSGRDRTSLLIRIQHKPGTLAEVVN CFQRHNNNLIRIESRPSKVINWEYVFYIDAAGHIQESPLRETLPELEQHCSMLKILGSYADTDVI >Mature_385_residues METTHHGEDASPDNPPRQQKSGNTDEQTIALTKARLAIDEVDARIVELLKKRAEWVHEVGRIKKEKNSPIFVPERETALL NKLNRLNAGVLPEASLQAIYREIISCSFFLEGGLTIAYLGPKGTWSHQAALKQFGKSCELIPCQSFKDVFDMVDRGKAQY GVVPVENSSEGSVTAVMDLFVTSPLKICAQINLNIRNSLMADIPREHIRILYSHPQVLGQTRNWIQRHFPNAELVETSST TKASILAKENAAMGAASLGCPLAAELFGLNILEEDVQDQSCNTTRFAVIGRQETQPSGRDRTSLLIRIQHKPGTLAEVVN CFQRHNNNLIRIESRPSKVINWEYVFYIDAAGHIQESPLRETLPELEQHCSMLKILGSYADTDVI
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=376, Percent_Identity=30.5851063829787, Blast_Score=170, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324013, Length=304, Percent_Identity=28.2894736842105, Blast_Score=107, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 42978; Mature: 42978
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTHHGEDASPDNPPRQQKSGNTDEQTIALTKARLAIDEVDARIVELLKKRAEWVHEVG CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKKEKNSPIFVPERETALLNKLNRLNAGVLPEASLQAIYREIISCSFFLEGGLTIAYLG HHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEC PKGTWSHQAALKQFGKSCELIPCQSFKDVFDMVDRGKAQYGVVPVENSSEGSVTAVMDLF CCCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH VTSPLKICAQINLNIRNSLMADIPREHIRILYSHPQVLGQTRNWIQRHFPNAELVETSST HHCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCC TKASILAKENAAMGAASLGCPLAAELFGLNILEEDVQDQSCNTTRFAVIGRQETQPSGRD CHHHEEECCCCCCCHHHCCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC RTSLLIRIQHKPGTLAEVVNCFQRHNNNLIRIESRPSKVINWEYVFYIDAAGHIQESPLR CEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCHHH ETLPELEQHCSMLKILGSYADTDVI HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure METTHHGEDASPDNPPRQQKSGNTDEQTIALTKARLAIDEVDARIVELLKKRAEWVHEVG CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKKEKNSPIFVPERETALLNKLNRLNAGVLPEASLQAIYREIISCSFFLEGGLTIAYLG HHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEC PKGTWSHQAALKQFGKSCELIPCQSFKDVFDMVDRGKAQYGVVPVENSSEGSVTAVMDLF CCCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH VTSPLKICAQINLNIRNSLMADIPREHIRILYSHPQVLGQTRNWIQRHFPNAELVETSST HHCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCC TKASILAKENAAMGAASLGCPLAAELFGLNILEEDVQDQSCNTTRFAVIGRQETQPSGRD CHHHEEECCCCCCCHHHCCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC RTSLLIRIQHKPGTLAEVVNCFQRHNNNLIRIESRPSKVINWEYVFYIDAAGHIQESPLR CEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCHHH ETLPELEQHCSMLKILGSYADTDVI HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]