| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477827
Identifier: 186477827
GI number: 186477827
Start: 3462418
End: 3462687
Strand: Reverse
Name: 186477827
Synonym: Bphy_3083
Alternate gene names: NA
Gene position: 3462687-3462418 (Counterclockwise)
Preceding gene: 186477828
Following gene: 186477826
Centisome position: 99.53
GC content: 60.37
Gene sequence:
>270_bases GTGACTCATACGGGACAAGCGAGCACGATGAAGCATACACACGAAATCCGGAAGAGTCGTTGGTCGCCATCATATAGCGC CAGCTGCGTGACGATTGCGTTCCATTGTGCCGCCACGCCTTGTCCGTCGAATCCAAGCAATGACAGCCACCGCGACGGTT TGTCAGACGACCGCCGAACCGCGCATATGAACGCCGCACACGCTGCGTCGCCGCGCAAGCCGCCCAGCGGGCGGCTTTTG TGCTTCCTCGACGGCTATGCCAAGCCGTAA
Upstream 100 bases:
>100_bases GTGTCGAAATTCAGGTCGACGGCAAGTAAGTTTTTCGTTGAAGTACCGGAAGTGGCGGCGTCGGTGACCCATTGACGCCG CCGCGCCTTTTTGTGCTTTC
Downstream 100 bases:
>100_bases CAGCGCGTAACCGACACCTCACCGTCGGTAACACACACCGGGCGTGCCCAGCATTACTCTTCCGATTTCATCGCCGGGCG ACGCGTGAGCTACCATTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTHTGQASTMKHTHEIRKSRWSPSYSASCVTIAFHCAATPCPSNPSNDSHRDGLSDDRRTAHMNAAHAASPRKPPSGRLL CFLDGYAKP
Sequences:
>Translated_89_residues MTHTGQASTMKHTHEIRKSRWSPSYSASCVTIAFHCAATPCPSNPSNDSHRDGLSDDRRTAHMNAAHAASPRKPPSGRLL CFLDGYAKP >Mature_88_residues THTGQASTMKHTHEIRKSRWSPSYSASCVTIAFHCAATPCPSNPSNDSHRDGLSDDRRTAHMNAAHAASPRKPPSGRLLC FLDGYAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9690; Mature: 9559
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTGQASTMKHTHEIRKSRWSPSYSASCVTIAFHCAATPCPSNPSNDSHRDGLSDDRRT CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH AHMNAAHAASPRKPPSGRLLCFLDGYAKP HHCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure THTGQASTMKHTHEIRKSRWSPSYSASCVTIAFHCAATPCPSNPSNDSHRDGLSDDRRT CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH AHMNAAHAASPRKPPSGRLLCFLDGYAKP HHCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA