| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477825
Identifier: 186477825
GI number: 186477825
Start: 3459753
End: 3460532
Strand: Direct
Name: 186477825
Synonym: Bphy_3081
Alternate gene names: NA
Gene position: 3459753-3460532 (Clockwise)
Preceding gene: 186477824
Following gene: 186477833
Centisome position: 99.44
GC content: 67.82
Gene sequence:
>780_bases ATGAGTTTCTGGATGCGGCGATTGCGCGCCGCGCTGCCCTGGCTGATCGTCGCACTGATCGCGAACGTCCTGGTGTTGCT CGTGATGGCGCCCGCCGCGTGGATCACGCCGCAGTTCACGAAGGCGACCGCCGGGCGTGTCAATCTCGTCGATGCGTCGG GGTCGCTGTGGCACGGCTCGGCTTCGCTGATGCTCGCCGCTGGGCCCGGTGCGGAAGCGGCGACGCTGCTGCCGGGACGC ATCGAATGGCACACGTCGTTCTGGCCGCTGTTCACGGGCCGCGTGCGGATGGAGATGCGGCAGAGCGAAGCGATGCCCGG GCCTGTCTTTGTCGATGCGACGCTGCGCAGCGCGACGCTGTCGGGCGGCAGCATCGCGGTGCCGGCGTCGTTGCTCGCGG GCCTCGGCGCACCGTTCAACACACTCGATCTGCAAGGCGACGTGCGGCTCGCATGGACCGACTGGCGCAGCTTCAATCGA CAGGCGTTCGGCCAGCTGATCGTCACGCTCAACGACATGAGCTCGCGGGTGTCGCGCGTGAAGCCGCTGGGATCGTATCG CGTGGTATTCCAGGCGCAGGGCGCGTCGGGCGCGCTCGATCTGTCGACGACGAAGGGGCCGTTGCTGCTCAACGGTCACG GCACGGTCAGCGAAGCGTCGACGTCGTTCACGGGCATCGCGAGCACGACGCCCGACGCCGTCGACAATCTCGCCGGGCTG CTGAATCTGCTCGGACGACCGATAGGTCCTGGCCAGGTCGCGCTCACGTTCACGCACTGA
Upstream 100 bases:
>100_bases GAGGCGCACGTGACGGCGCTGAAGCAGGACGGACAGGTCGATCTGACGGCATCGCTGCAGCCGGCCATCGTTAAATGACG GCGCTGCCACAGGATCACGC
Downstream 100 bases:
>100_bases CTTTTCCGGGCCGCTCCAAAACACGACGGCCGCCATGTTTGCGCATGGCGGCCGTTTTGCGTCGCGCGGATAACGACTGC GATCAGCGTGCCGCGGCGGA
Product: type II secretion system protein N
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSFWMRRLRAALPWLIVALIANVLVLLVMAPAAWITPQFTKATAGRVNLVDASGSLWHGSASLMLAAGPGAEAATLLPGR IEWHTSFWPLFTGRVRMEMRQSEAMPGPVFVDATLRSATLSGGSIAVPASLLAGLGAPFNTLDLQGDVRLAWTDWRSFNR QAFGQLIVTLNDMSSRVSRVKPLGSYRVVFQAQGASGALDLSTTKGPLLLNGHGTVSEASTSFTGIASTTPDAVDNLAGL LNLLGRPIGPGQVALTFTH
Sequences:
>Translated_259_residues MSFWMRRLRAALPWLIVALIANVLVLLVMAPAAWITPQFTKATAGRVNLVDASGSLWHGSASLMLAAGPGAEAATLLPGR IEWHTSFWPLFTGRVRMEMRQSEAMPGPVFVDATLRSATLSGGSIAVPASLLAGLGAPFNTLDLQGDVRLAWTDWRSFNR QAFGQLIVTLNDMSSRVSRVKPLGSYRVVFQAQGASGALDLSTTKGPLLLNGHGTVSEASTSFTGIASTTPDAVDNLAGL LNLLGRPIGPGQVALTFTH >Mature_258_residues SFWMRRLRAALPWLIVALIANVLVLLVMAPAAWITPQFTKATAGRVNLVDASGSLWHGSASLMLAAGPGAEAATLLPGRI EWHTSFWPLFTGRVRMEMRQSEAMPGPVFVDATLRSATLSGGSIAVPASLLAGLGAPFNTLDLQGDVRLAWTDWRSFNRQ AFGQLIVTLNDMSSRVSRVKPLGSYRVVFQAQGASGALDLSTTKGPLLLNGHGTVSEASTSFTGIASTTPDAVDNLAGLL NLLGRPIGPGQVALTFTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27420; Mature: 27289
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFWMRRLRAALPWLIVALIANVLVLLVMAPAAWITPQFTKATAGRVNLVDASGSLWHGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCEEECC ASLMLAAGPGAEAATLLPGRIEWHTSFWPLFTGRVRMEMRQSEAMPGPVFVDATLRSATL CEEEEEECCCCCCEEECCCEEEEECCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEEEC SGGSIAVPASLLAGLGAPFNTLDLQGDVRLAWTDWRSFNRQAFGQLIVTLNDMSSRVSRV CCCCEEHHHHHHHHCCCCCCEEECCCCEEEEEECHHHCCHHHHHEEEEEEHHHHHHHHHH KPLGSYRVVFQAQGASGALDLSTTKGPLLLNGHGTVSEASTSFTGIASTTPDAVDNLAGL CCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LNLLGRPIGPGQVALTFTH HHHHCCCCCCCCEEEEEEC >Mature Secondary Structure SFWMRRLRAALPWLIVALIANVLVLLVMAPAAWITPQFTKATAGRVNLVDASGSLWHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCEEECC ASLMLAAGPGAEAATLLPGRIEWHTSFWPLFTGRVRMEMRQSEAMPGPVFVDATLRSATL CEEEEEECCCCCCEEECCCEEEEECCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEEEC SGGSIAVPASLLAGLGAPFNTLDLQGDVRLAWTDWRSFNRQAFGQLIVTLNDMSSRVSRV CCCCEEHHHHHHHHCCCCCCEEECCCCEEEEEECHHHCCHHHHHEEEEEEHHHHHHHHHH KPLGSYRVVFQAQGASGALDLSTTKGPLLLNGHGTVSEASTSFTGIASTTPDAVDNLAGL CCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LNLLGRPIGPGQVALTFTH HHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA