Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477789

Identifier: 186477789

GI number: 186477789

Start: 3418244

End: 3419404

Strand: Reverse

Name: 186477789

Synonym: Bphy_3043

Alternate gene names: NA

Gene position: 3419404-3418244 (Counterclockwise)

Preceding gene: 186477790

Following gene: 186477788

Centisome position: 98.28

GC content: 59.95

Gene sequence:

>1161_bases
ATGAAAACGACAAAACTGTGGGTCCGCTCAGCGATCGCAATGGCGCTCGTGTGTGGGGCGAGTGCAGCGATCGCGCAGGT
GAAGATCGGTGTGACGCTGTCGACGACGGGGCCCGCCGCATCACTCGGCATCCCTGAGAAAAACACGATTGCGCTACTGC
CGAAAGAGATCGCAGGCAAGAGCGTTCAATACATCGTGCTCGACGATGCATCGGACACGAGCCGTGCAGTGCAGAACACG
CGCAAGCTGATCGATGAGGATCACGTCGATGCGATTATCGGTTCGACGGTGACGCCGAATTCTCTCGCGATGCTCGATCC
GGTTTCCGAAGGCAAGACGCCGATGATTTCTCTCGCCGCGTCGGCGGCCATCATTTCGCCGATGGATGCGAAGCGTTCGT
GGGCATTCAAGACGCCGCAAAACGACGGCCTGATGGCCGATGCGATCGCCGGGTACATGGAAACGCACGGCGTGAAGTCG
GTCGCGTTCATTGGCTTCTCGGATGCGTATGGCGAGAACTGGTACAACGTTTTCAGCCAGGCGGCCAGTGCGCATCACCT
GAAGCTCGTCGCAAACGAGCGCTATAACCGCACCGATGCATCGGTGACGGGGCAGGTGCTGAAGCTCGTCGCTGCGAATC
CGGATGCAGTGCTGATCGCCGGTTCGGGAACGCCGTCGGCGCTGCCCGCGAAGGCGCTCAAGGAGCGCGGCTATAAAGGC
AAGATCTATCAGACGCACGGTGTGGCGAACAACGACTTCCTGCGCGTGTGCGGCAAGGACTGCGAAGGCGAATTGCTGCC
CGCGGGCCCGATTCTCGTCGCCGATCAGCTGCCGGATTCCAACCCTGTGAAGAAATCCTCGCTGGCGTACAAGAACGCGT
ATGAGAAGGCCTATGGCGCGGGTTCTGTGGCAACGTTCGGCGGCCATGCATGGGATGCAGGCCAGATGCTTCAACGCGCG
ATTCCCGAGGCGTTGAAGAAGGGCCAACCGGGTACGGAAGCGTTCCGCGTCGCGCTGCGCGAAGCACTCGAGAACGTCAA
AGACTTGCCACTCTCGCACGGCATCATGAACATCACGGCCACCGATCATAACGGCCTCGACAAGCGCGCACGCGTGATCG
TCGAGATCTCCGATGGCAAGTGGAAATTCCAAAACGATTAA

Upstream 100 bases:

>100_bases
GGAAAACCATGCTTGGCAGGCTTATACCCGATAACTAGATTCAGTTACCCGGTTCCCGAACTGGATTACGACACGCATTT
AAAGCGTTTGGAGACGAGCA

Downstream 100 bases:

>100_bases
ACAAGGTACGCGCCTCTCGCGCAGGGCGTAGTGACGAGCGTGTGAGAACGCTCTTAGGCCACGCCACCAATTCTGATCGA
TAACAATGGCAAGCTCTGCC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKTTKLWVRSAIAMALVCGASAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNT
RKLIDEDHVDAIIGSTVTPNSLAMLDPVSEGKTPMISLAASAAIISPMDAKRSWAFKTPQNDGLMADAIAGYMETHGVKS
VAFIGFSDAYGENWYNVFSQAASAHHLKLVANERYNRTDASVTGQVLKLVAANPDAVLIAGSGTPSALPAKALKERGYKG
KIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGSVATFGGHAWDAGQMLQRA
IPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITATDHNGLDKRARVIVEISDGKWKFQND

Sequences:

>Translated_386_residues
MKTTKLWVRSAIAMALVCGASAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNT
RKLIDEDHVDAIIGSTVTPNSLAMLDPVSEGKTPMISLAASAAIISPMDAKRSWAFKTPQNDGLMADAIAGYMETHGVKS
VAFIGFSDAYGENWYNVFSQAASAHHLKLVANERYNRTDASVTGQVLKLVAANPDAVLIAGSGTPSALPAKALKERGYKG
KIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGSVATFGGHAWDAGQMLQRA
IPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITATDHNGLDKRARVIVEISDGKWKFQND
>Mature_386_residues
MKTTKLWVRSAIAMALVCGASAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNT
RKLIDEDHVDAIIGSTVTPNSLAMLDPVSEGKTPMISLAASAAIISPMDAKRSWAFKTPQNDGLMADAIAGYMETHGVKS
VAFIGFSDAYGENWYNVFSQAASAHHLKLVANERYNRTDASVTGQVLKLVAANPDAVLIAGSGTPSALPAKALKERGYKG
KIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGSVATFGGHAWDAGQMLQRA
IPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITATDHNGLDKRARVIVEISDGKWKFQND

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40956; Mature: 40956

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTKLWVRSAIAMALVCGASAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGK
CCCHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCC
SVQYIVLDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPVSEGKTPMISLAA
CEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEHHH
SAAIISPMDAKRSWAFKTPQNDGLMADAIAGYMETHGVKSVAFIGFSDAYGENWYNVFSQ
HHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHH
AASAHHLKLVANERYNRTDASVTGQVLKLVAANPDAVLIAGSGTPSALPAKALKERGYKG
HCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHCCCCC
KIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGA
CEEEECCCCCCCHHEECCCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
GSVATFGGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITA
CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TDHNGLDKRARVIVEISDGKWKFQND
CCCCCCCCCCEEEEEEECCEEEECCC
>Mature Secondary Structure
MKTTKLWVRSAIAMALVCGASAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGK
CCCHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCC
SVQYIVLDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPVSEGKTPMISLAA
CEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEHHH
SAAIISPMDAKRSWAFKTPQNDGLMADAIAGYMETHGVKSVAFIGFSDAYGENWYNVFSQ
HHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHH
AASAHHLKLVANERYNRTDASVTGQVLKLVAANPDAVLIAGSGTPSALPAKALKERGYKG
HCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHCCCCC
KIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGA
CEEEECCCCCCCHHEECCCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
GSVATFGGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITA
CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TDHNGLDKRARVIVEISDGKWKFQND
CCCCCCCCCCEEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]