Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is sopA [C]

Identifier: 186477783

GI number: 186477783

Start: 3410795

End: 3411565

Strand: Reverse

Name: sopA [C]

Synonym: Bphy_3037

Alternate gene names: 186477783

Gene position: 3411565-3410795 (Counterclockwise)

Preceding gene: 186477784

Following gene: 186477782

Centisome position: 98.06

GC content: 59.79

Gene sequence:

>771_bases
ATGGCAAAAATCTTCTGCGTTGCGAACCAGAAGGGTGGAGTCGGCAAAACGACGACTGCGGTCAATCTCGCCGCGAGCCT
CGCATCGCAGGGACAGCGGGTCCTGCTCATCGATCTCGATCCGCAAGGCAACGCCACCATGGGCAGCGGCATCGATAAGG
CCGCTTGCGAGAACACGGTTTATGAAGTCCTGGTCGACGGCGTGTCGGTCGCCGATGCGCGAGTGAAGCCCGAATCCGTT
TCATATGACGTATTGCCGGCGAATCGCGAGCTGGCAGGCGCCGAAGTCGAACTCGTCAGCATGGAAAACCGCGAGCGCCA
GCTCAGAGAAGCGCTCGCACATGTGGTAGAAGACTACGACTTCGTGCTGATCGACTGTCCGCCGGCGCTGTCGCTGCTGA
CGCTCAATGGCCTGTGTGCCGCGCACGGCGTCGTGATTCCGATGCAGTGTGAATACTTCGCACTCGAAGGTTTGTCGGAT
CTCGTCAACACCATCAAGCAGGTTCACGCGAATCTGAATCGCGACCTGAAGGTAATCGGCTTGCTGCGCGTGATGTTCGA
TCCGCGCATCACGCTGCAACAGCAGGTGTCGGACCAGTTGAAGGAGCACTTTGGCGACAAGGTGTTCGACGTCGTCATTC
CGCGGAACGTGCGACTTGCCGAGGCGCCGAGTTACGGCTTGCCAGGCGTCGTGTTCGACCGCGCGTCGCGCGGTGCGCAG
GCTTATGTGCAATTTGGCGCGGAAATGATCGAACGGGTGCGTGCGCTATGA

Upstream 100 bases:

>100_bases
GTGCCATCGCTGGATGCCGAACGGCATCTGGTCGAAGTCGCGGTAGGCTGAATTCCGATTGGGATTTCAATTAAACAGGC
TGCAAAGGGGCACCTAAAAG

Downstream 100 bases:

>100_bases
CGCTGCGCCAATCATCCAAAGCGGATCGAGGAACCACGATGAACGCAGTAGCACGAAAAAAAGGACTGGGCAGGGGGCTG
GAGGCACTGCTCGGCGGAAG

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAKIFCVANQKGGVGKTTTAVNLAASLASQGQRVLLIDLDPQGNATMGSGIDKAACENTVYEVLVDGVSVADARVKPESV
SYDVLPANRELAGAEVELVSMENRERQLREALAHVVEDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSD
LVNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKEHFGDKVFDVVIPRNVRLAEAPSYGLPGVVFDRASRGAQ
AYVQFGAEMIERVRAL

Sequences:

>Translated_256_residues
MAKIFCVANQKGGVGKTTTAVNLAASLASQGQRVLLIDLDPQGNATMGSGIDKAACENTVYEVLVDGVSVADARVKPESV
SYDVLPANRELAGAEVELVSMENRERQLREALAHVVEDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSD
LVNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKEHFGDKVFDVVIPRNVRLAEAPSYGLPGVVFDRASRGAQ
AYVQFGAEMIERVRAL
>Mature_255_residues
AKIFCVANQKGGVGKTTTAVNLAASLASQGQRVLLIDLDPQGNATMGSGIDKAACENTVYEVLVDGVSVADARVKPESVS
YDVLPANRELAGAEVELVSMENRERQLREALAHVVEDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDL
VNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKEHFGDKVFDVVIPRNVRLAEAPSYGLPGVVFDRASRGAQA
YVQFGAEMIERVRAL

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27778; Mature: 27647

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIFCVANQKGGVGKTTTAVNLAASLASQGQRVLLIDLDPQGNATMGSGIDKAACENTV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YEVLVDGVSVADARVKPESVSYDVLPANRELAGAEVELVSMENRERQLREALAHVVEDYD
HHHHHCCCHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC
FVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDLVNTIKQVHANLNRDLKVIG
EEEEECCCCHHHHHHCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLRVMFDPRITLQQQVSDQLKEHFGDKVFDVVIPRNVRLAEAPSYGLPGVVFDRASRGAQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCEECCCCCCHH
AYVQFGAEMIERVRAL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKIFCVANQKGGVGKTTTAVNLAASLASQGQRVLLIDLDPQGNATMGSGIDKAACENTV
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YEVLVDGVSVADARVKPESVSYDVLPANRELAGAEVELVSMENRERQLREALAHVVEDYD
HHHHHCCCHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC
FVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDLVNTIKQVHANLNRDLKVIG
EEEEECCCCHHHHHHCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLRVMFDPRITLQQQVSDQLKEHFGDKVFDVVIPRNVRLAEAPSYGLPGVVFDRASRGAQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCEECCCCCCHH
AYVQFGAEMIERVRAL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]