| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 186477767
GI number: 186477767
Start: 3391677
End: 3393098
Strand: Reverse
Name: yeiH [C]
Synonym: Bphy_3021
Alternate gene names: 186477767
Gene position: 3393098-3391677 (Counterclockwise)
Preceding gene: 186477768
Following gene: 186477766
Centisome position: 97.53
GC content: 64.63
Gene sequence:
>1422_bases ATGAGCGATACGAGACATAGTTTGCCGGCGGGCGCGCAACCTTCGCGACGGGCGAGCACGACAGGCGGCGGATTGTTTTC GACGGAGGACTGGTGGGCCGTGTGGGTCGGGCTGCTGGTGATTGTCGTTGCGTGGGCTTTGTTCGCGTCGGGCAGCAGCA TCAAATGGATAGCGACGGCCCCCGCGAAATGGTCTGACTTCGGCGCGGCGGGGCACGATCTCGCGAAGCATCTGCCGAAC TACGTCGCCCTCTTCGTCGCGTTCGCCGTGTTGTTCGGCGTTAGCCTGAGCGTGCTGAAACAGCGAATCACGCACTTCCT GCCGTCGTTCGCCATTCTGTTCGTCGTGTCGGTGCTGATTTTCGAGGTCGGCGCCTGGGCCAACGCGTCGAAGTACAACC TCGAGCCGCCGCTCGTCGCACTCGCGCTCGGTCTGCTGATTTCCAACGTTTTCGCGTTGCCCGAGTGGTTCTCGGCGGGA CTGCGTGTCGAGTTTTACATCAAGGTGGGAATCGTGCTGCTCGGTGCGACGCTGCCGTTCACGCTGCTCGTGTGGGCCGG CCCCGTTGCCGTCGGACAGGCGACGATCGTCTCGCTCGTGACGTTCTTCGTGATCTTCTTTGCCGCCAAGGCGCTCGGTC TCGACAAGCGCTTCGCCGCGGTACTCGGCGTGGGGGGCGCGGTGTGCGGCGTGTCGGCGTCCATCGCGATTGCGGGCGCG GTGCGCGCGAAGCGCGAACATGCGTCGGTGGCGATCACGCTGGTGATTCTGTGGGCCATCGTCATGATCTTCGTGCTGCC GTTCGTGTCGCGCTCACTGGGACTGTCGACGGCCGTCGCGGGCGCATGGATAGGCACGTCGGAGTTCGCGGATGCCGCCG GGATCGCCGCCGCGCAGGCGTACGGCGACTTCGCGAAGCATGCGGGCGGCGCGATTGCCGGCTCTCCCGAAGCGTCGCTT CAGGCGTTCACGCTGATGAAGGTAGTAGGCCGCGACATCTGGATCGGCATCTGGGCGTTCCTGCTGGCGATCGTCGCGAC CACGCGCTGGGAGTCGGATGAAAGCGGCGTTGTCGCGAAAGCCGACGCCCGCGAGATCTGGGCGCGCTTTCCGAAATTCG TGATCGGCTTCGTGATCGCGTCGGCGCTCGTCACGTGGATTGCCAGCCACTACTCGCTTGCCGATTACCGCAAGGTGGTG ACGCCCGAGTTCGTCGCGCCGATCACCGCACTGCGCACGTGGGCGTTCATCTTCTGCTTCTTCAGCATCGGACTGACGAC GCGCGTCCGTTCACTTGCGGCGACGGGCATCAAGCCGTTCATCGCGTTCACGGTCGGCGTGGCCGTCAATATCGCCATCG GCTACGCGCTGTCCGCGCACCTGTTCGCACCGTATTGGAATAGCTTGGGGCAGGGCTCGTGA
Upstream 100 bases:
>100_bases CGTTTGGCGAGATCGCTCGACTATATTTCGCCGAATCGGCGCATGAATAACAACAATCGACAACACGTGCGCCGTCATCT CATCCTTCGGGGCACTGCAC
Downstream 100 bases:
>100_bases GCGCGGCCGCCGTTCTCGACGACCGCATCCATTCTGAGCCCGAGGTGTGCGCGCCACGCTGCGCCGATTGCCGGTTTCGC GCCGATGATCGGCATTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSDTRHSLPAGAQPSRRASTTGGGLFSTEDWWAVWVGLLVIVVAWALFASGSSIKWIATAPAKWSDFGAAGHDLAKHLPN YVALFVAFAVLFGVSLSVLKQRITHFLPSFAILFVVSVLIFEVGAWANASKYNLEPPLVALALGLLISNVFALPEWFSAG LRVEFYIKVGIVLLGATLPFTLLVWAGPVAVGQATIVSLVTFFVIFFAAKALGLDKRFAAVLGVGGAVCGVSASIAIAGA VRAKREHASVAITLVILWAIVMIFVLPFVSRSLGLSTAVAGAWIGTSEFADAAGIAAAQAYGDFAKHAGGAIAGSPEASL QAFTLMKVVGRDIWIGIWAFLLAIVATTRWESDESGVVAKADAREIWARFPKFVIGFVIASALVTWIASHYSLADYRKVV TPEFVAPITALRTWAFIFCFFSIGLTTRVRSLAATGIKPFIAFTVGVAVNIAIGYALSAHLFAPYWNSLGQGS
Sequences:
>Translated_473_residues MSDTRHSLPAGAQPSRRASTTGGGLFSTEDWWAVWVGLLVIVVAWALFASGSSIKWIATAPAKWSDFGAAGHDLAKHLPN YVALFVAFAVLFGVSLSVLKQRITHFLPSFAILFVVSVLIFEVGAWANASKYNLEPPLVALALGLLISNVFALPEWFSAG LRVEFYIKVGIVLLGATLPFTLLVWAGPVAVGQATIVSLVTFFVIFFAAKALGLDKRFAAVLGVGGAVCGVSASIAIAGA VRAKREHASVAITLVILWAIVMIFVLPFVSRSLGLSTAVAGAWIGTSEFADAAGIAAAQAYGDFAKHAGGAIAGSPEASL QAFTLMKVVGRDIWIGIWAFLLAIVATTRWESDESGVVAKADAREIWARFPKFVIGFVIASALVTWIASHYSLADYRKVV TPEFVAPITALRTWAFIFCFFSIGLTTRVRSLAATGIKPFIAFTVGVAVNIAIGYALSAHLFAPYWNSLGQGS >Mature_472_residues SDTRHSLPAGAQPSRRASTTGGGLFSTEDWWAVWVGLLVIVVAWALFASGSSIKWIATAPAKWSDFGAAGHDLAKHLPNY VALFVAFAVLFGVSLSVLKQRITHFLPSFAILFVVSVLIFEVGAWANASKYNLEPPLVALALGLLISNVFALPEWFSAGL RVEFYIKVGIVLLGATLPFTLLVWAGPVAVGQATIVSLVTFFVIFFAAKALGLDKRFAAVLGVGGAVCGVSASIAIAGAV RAKREHASVAITLVILWAIVMIFVLPFVSRSLGLSTAVAGAWIGTSEFADAAGIAAAQAYGDFAKHAGGAIAGSPEASLQ AFTLMKVVGRDIWIGIWAFLLAIVATTRWESDESGVVAKADAREIWARFPKFVIGFVIASALVTWIASHYSLADYRKVVT PEFVAPITALRTWAFIFCFFSIGLTTRVRSLAATGIKPFIAFTVGVAVNIAIGYALSAHLFAPYWNSLGQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 50146; Mature: 50015
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTRHSLPAGAQPSRRASTTGGGLFSTEDWWAVWVGLLVIVVAWALFASGSSIKWIATA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PAKWSDFGAAGHDLAKHLPNYVALFVAFAVLFGVSLSVLKQRITHFLPSFAILFVVSVLI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEVGAWANASKYNLEPPLVALALGLLISNVFALPEWFSAGLRVEFYIKVGIVLLGATLPF HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHHH TLLVWAGPVAVGQATIVSLVTFFVIFFAAKALGLDKRFAAVLGVGGAVCGVSASIAIAGA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH VRAKREHASVAITLVILWAIVMIFVLPFVSRSLGLSTAVAGAWIGTSEFADAAGIAAAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHH YGDFAKHAGGAIAGSPEASLQAFTLMKVVGRDIWIGIWAFLLAIVATTRWESDESGVVAK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ADAREIWARFPKFVIGFVIASALVTWIASHYSLADYRKVVTPEFVAPITALRTWAFIFCF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FSIGLTTRVRSLAATGIKPFIAFTVGVAVNIAIGYALSAHLFAPYWNSLGQGS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDTRHSLPAGAQPSRRASTTGGGLFSTEDWWAVWVGLLVIVVAWALFASGSSIKWIATA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PAKWSDFGAAGHDLAKHLPNYVALFVAFAVLFGVSLSVLKQRITHFLPSFAILFVVSVLI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEVGAWANASKYNLEPPLVALALGLLISNVFALPEWFSAGLRVEFYIKVGIVLLGATLPF HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHHH TLLVWAGPVAVGQATIVSLVTFFVIFFAAKALGLDKRFAAVLGVGGAVCGVSASIAIAGA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH VRAKREHASVAITLVILWAIVMIFVLPFVSRSLGLSTAVAGAWIGTSEFADAAGIAAAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHH YGDFAKHAGGAIAGSPEASLQAFTLMKVVGRDIWIGIWAFLLAIVATTRWESDESGVVAK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ADAREIWARFPKFVIGFVIASALVTWIASHYSLADYRKVVTPEFVAPITALRTWAFIFCF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FSIGLTTRVRSLAATGIKPFIAFTVGVAVNIAIGYALSAHLFAPYWNSLGQGS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]