The gene/protein map for NC_010622 is currently unavailable.
Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477743

Identifier: 186477743

GI number: 186477743

Start: 3358300

End: 3360426

Strand: Reverse

Name: 186477743

Synonym: Bphy_2997

Alternate gene names: NA

Gene position: 3360426-3358300 (Counterclockwise)

Preceding gene: 186477744

Following gene: 186477742

Centisome position: 96.59

GC content: 66.2

Gene sequence:

>2127_bases
ATGCAAGCGCCCCCCGATCACGACTCACGCACGAACGGCGACGTCCCAATGGACGCGACCGCGCACGCACCCGCGCCGCT
GCCGGACTTCGATGCGTCCGCCATGTTGCAAGCTGCCTTCGCGCATCACCAGGCGGGCCGCACGGGCGAAGCCGCCGAAT
GCTACAAACAGATTCTCCAGCACGACGGGATGCACCCGGATGCAATGCATTTTCTCGGCGTGCTCGCTTGCGACGTCGGT
AATCTGCCAGCGGGCATCGACCTGATCGAAAAATCGATCCAGCTGCATCCGAACGCGATCTATCTGAACAACCTCGGCAA
CATGCGCGGCCGCGCGCGCGACCTTCAGGGCGCGATCGCTGCGTATCGCGCGGCGCTTTCGCTCGCGCCCGATTACGCGC
AAGCGCACAGCAACCTCGGCCACACGCTGCGCGAAGCGGGCGATCCGGCGGCGGCGATCGACAGCTGCACGGTGGCCACG
CGTCTCAAGCCGGATCTCCCGCAAGCTTGGACCCATCTCGGCAACGCGTTGCTGGAACTCGGCAGCGACGAGGGCGCGCT
GGACAGCTACATGAAGGCGCTCGCGCTCCAGCCCAACGATGCGAACGCGCATAACAACGTCGGCAACATTCTGGAGAAGT
ACGGCCGCGCAGCGGGCGCGGCCGAGTCGTATCGCCGCGCGCTCGCGCTCGAACCGCACCGCGCGTCGCTGCACAACAAT
CTCGGCAATGTGCTGCGCGATCAGGGCCAGCTCGATCAGGCGACAGCGTGCTACCGGCAGGCCGTCGCGCTCGATCCCGG
TTTCGCGCAGGCGCACAGCAACCTGCTGCTGCTGCTCAACTCGCGGCTCGACGTCGCGTTGCGCGAGCAGTTCGATGAAG
CGCGTGCATTCGGCGAACACCAGTCCGCTAAGGCGCAGCCATTCCAGCACAGTGCAAACGCGAACGACGCAGGCAGGCGT
CTGCGCGTCGGCTTCGTGTCCGGCGATCTCAACTCGCATCCCGTCGGCTTTTTCCTCGAAAGCGTGCTCGGCCATCTGGA
CCGCACGCGCATCGAACTGGTCGCCTACGCGACGCGCAAACGCGAAGACGCGGTGTCGCAGCGTCTGATGCCGCAGTTCA
GCGCGTGGCACGACATCTCGCGCCTCGACGACGCAGCCTGCGCGCGCCGCATCCGCGACGACGGGATCGATATTCTCGTG
GACCTGTCGGGTCACACGAATCACAACCGCTTGTCCGTGTTTGCGTGGAAGCCCGCACCCGTGCAGGCGACGTGGCTCGG
CTACTTCGCGACGACGGGTCTTGCCGCGATCGATTACGTGATTGCGGACCGCCACGTGCTGCCGTTGGACGAAGCGTCGC
AATTCGTCGAAGCGCCGTGGCACTTGCCCGACAGCTATCTGTGCTTTACCCCGCCGCCGTTCGATATCGAGGTCGGCCCA
TTGCCCGCGAGTGCGAACGGCGCGATCACGTTCGGCTGCTTCAACCATCTGGTAAAGCTCAACGAGGCCGTCGTCGCGCT
GTGGGCGCGCGTGCTCGACGCCATGCCGGGTTCGCGTCTGCTGCTGAAAACGCGGCAACTCGACGACCCGGCCGTGCAGC
ACGCCACCCTCGCGCGCTTCGCCGCGCACGGCATCGACGGCGCGCGTCTGATGCTCGAAGGCCAGTCGCCGCGTGCAGAA
CTGCTCGCGGCGTACAACCGCGTCGACATCGCGCTCGACCCATTCCCATACGCGGGCGGCACGACGAGCATCGAAGCGTT
GTGGATGGGCGTGCCCGTGCTGACGCGGCGTGGCGAACGCTTTCTGTCGCATGTCGGCGAAAGCATCGTGGATACGGTGG
GCCTGCCAGACTGGATCGCGAGCGACGACGCGGACTATATCGCCAAGGCCGTTCGCGTCGGCGTGCAGCGCGACGAACTG
GCGACGCTCAGACGCACATTGCGCCAACGCCTGCTGGCTTCGCCACTGTGCGACGCGCCGCGTTTCGCGCGCCATCTCGA
GGACGCATTTCACGGCATGTGGGCGCGCCGCGTCGCATGCCATCAAGCAAACGACGGGCATCCCGCCCAACCGCATCGAC
ATTCATCAGGGGACGCCCGCCACGCCGCGGAGCGCAATTTCGCATGA

Upstream 100 bases:

>100_bases
TCGTTCGGCAGCCCGGCATGGCGCGGCGCATACGAGCGCTACATGCAGAAATACATGGGCGTCTGAGCGCGCCGTCAGCC
GCATCACGTCAGGATTGCCG

Downstream 100 bases:

>100_bases
CAGACTTCAATCAGAACCACAATGGCTCGTGGCAGCGCATTCCGACGCCCGCGAACTTCGGCGCGGCACCGGCACAGGCG
GCGCCCGACGCGGCTGCGCA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Domain Protein; Methyltransferase Type; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; FkbM Family Methyltransferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MQAPPDHDSRTNGDVPMDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQHDGMHPDAMHFLGVLACDVG
NLPAGIDLIEKSIQLHPNAIYLNNLGNMRGRARDLQGAIAAYRAALSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVAT
RLKPDLPQAWTHLGNALLELGSDEGALDSYMKALALQPNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNN
LGNVLRDQGQLDQATACYRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEHQSAKAQPFQHSANANDAGRR
LRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRKREDAVSQRLMPQFSAWHDISRLDDAACARRIRDDGIDILV
DLSGHTNHNRLSVFAWKPAPVQATWLGYFATTGLAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGP
LPASANGAITFGCFNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARFAAHGIDGARLMLEGQSPRAE
LLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGERFLSHVGESIVDTVGLPDWIASDDADYIAKAVRVGVQRDEL
ATLRRTLRQRLLASPLCDAPRFARHLEDAFHGMWARRVACHQANDGHPAQPHRHSSGDARHAAERNFA

Sequences:

>Translated_708_residues
MQAPPDHDSRTNGDVPMDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQHDGMHPDAMHFLGVLACDVG
NLPAGIDLIEKSIQLHPNAIYLNNLGNMRGRARDLQGAIAAYRAALSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVAT
RLKPDLPQAWTHLGNALLELGSDEGALDSYMKALALQPNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNN
LGNVLRDQGQLDQATACYRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEHQSAKAQPFQHSANANDAGRR
LRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRKREDAVSQRLMPQFSAWHDISRLDDAACARRIRDDGIDILV
DLSGHTNHNRLSVFAWKPAPVQATWLGYFATTGLAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGP
LPASANGAITFGCFNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARFAAHGIDGARLMLEGQSPRAE
LLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGERFLSHVGESIVDTVGLPDWIASDDADYIAKAVRVGVQRDEL
ATLRRTLRQRLLASPLCDAPRFARHLEDAFHGMWARRVACHQANDGHPAQPHRHSSGDARHAAERNFA
>Mature_708_residues
MQAPPDHDSRTNGDVPMDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQHDGMHPDAMHFLGVLACDVG
NLPAGIDLIEKSIQLHPNAIYLNNLGNMRGRARDLQGAIAAYRAALSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVAT
RLKPDLPQAWTHLGNALLELGSDEGALDSYMKALALQPNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNN
LGNVLRDQGQLDQATACYRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEHQSAKAQPFQHSANANDAGRR
LRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRKREDAVSQRLMPQFSAWHDISRLDDAACARRIRDDGIDILV
DLSGHTNHNRLSVFAWKPAPVQATWLGYFATTGLAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGP
LPASANGAITFGCFNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARFAAHGIDGARLMLEGQSPRAE
LLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGERFLSHVGESIVDTVGLPDWIASDDADYIAKAVRVGVQRDEL
ATLRRTLRQRLLASPLCDAPRFARHLEDAFHGMWARRVACHQANDGHPAQPHRHSSGDARHAAERNFA

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=441, Percent_Identity=29.7052154195011, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI32307150, Length=441, Percent_Identity=29.7052154195011, Blast_Score=188, Evalue=2e-47,
Organism=Homo sapiens, GI118766328, Length=202, Percent_Identity=30.6930693069307, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI118766330, Length=202, Percent_Identity=30.6930693069307, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI301336134, Length=208, Percent_Identity=31.25, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI83415184, Length=208, Percent_Identity=31.25, Blast_Score=75, Evalue=3e-13,
Organism=Homo sapiens, GI224809432, Length=182, Percent_Identity=28.021978021978, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI296531396, Length=212, Percent_Identity=26.8867924528302, Blast_Score=67, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=451, Percent_Identity=28.8248337028825, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI115532692, Length=451, Percent_Identity=28.8248337028825, Blast_Score=188, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI25147174, Length=231, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17647755, Length=452, Percent_Identity=28.9823008849558, Blast_Score=186, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24585827, Length=452, Percent_Identity=28.9823008849558, Blast_Score=186, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24585829, Length=452, Percent_Identity=28.9823008849558, Blast_Score=186, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24647123, Length=222, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281364285, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581187, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076610, Length=222, Percent_Identity=29.2792792792793, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19920486, Length=222, Percent_Identity=29.2792792792793, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77141; Mature: 77141

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPPDHDSRTNGDVPMDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HDGMHPDAMHFLGVLACDVGNLPAGIDLIEKSIQLHPNAIYLNNLGNMRGRARDLQGAIA
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
AYRAALSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLEL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GSDEGALDSYMKALALQPNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNN
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
LGNVLRDQGQLDQATACYRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEH
HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCC
QSAKAQPFQHSANANDAGRRLRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRK
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REDAVSQRLMPQFSAWHDISRLDDAACARRIRDDGIDILVDLSGHTNHNRLSVFAWKPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC
VQATWLGYFATTGLAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEECCC
LPASANGAITFGCFNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARF
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCHHHHHHHHHHH
AAHGIDGARLMLEGQSPRAELLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGER
HHCCCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHH
FLSHVGESIVDTVGLPDWIASDDADYIAKAVRVGVQRDELATLRRTLRQRLLASPLCDAP
HHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
RFARHLEDAFHGMWARRVACHQANDGHPAQPHRHSSGDARHAAERNFA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MQAPPDHDSRTNGDVPMDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HDGMHPDAMHFLGVLACDVGNLPAGIDLIEKSIQLHPNAIYLNNLGNMRGRARDLQGAIA
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
AYRAALSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLEL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GSDEGALDSYMKALALQPNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNN
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
LGNVLRDQGQLDQATACYRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEH
HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCC
QSAKAQPFQHSANANDAGRRLRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRK
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REDAVSQRLMPQFSAWHDISRLDDAACARRIRDDGIDILVDLSGHTNHNRLSVFAWKPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC
VQATWLGYFATTGLAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEECCC
LPASANGAITFGCFNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARF
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCHHHHHHHHHHH
AAHGIDGARLMLEGQSPRAELLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGER
HHCCCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHH
FLSHVGESIVDTVGLPDWIASDDADYIAKAVRVGVQRDELATLRRTLRQRLLASPLCDAP
HHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
RFARHLEDAFHGMWARRVACHQANDGHPAQPHRHSSGDARHAAERNFA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA