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The map label for this gene is fliD [H]

Identifier: 186477736

GI number: 186477736

Start: 3347484

End: 3348911

Strand: Direct

Name: fliD [H]

Synonym: Bphy_2990

Alternate gene names: 186477736

Gene position: 3347484-3348911 (Clockwise)

Preceding gene: 186477735

Following gene: 186477737

Centisome position: 96.21

GC content: 62.32

Gene sequence:

>1428_bases
ATGACCACCACGTCGACTTCGAACTCTTCAACTGACGTTACTGCCCTGCTACAGCAGGCAGCGCAGTCCATCATCAGCGG
CTCGACCAAGTCGACCCTCGATGTGAATTCACTGGTGTCGGCGCTCGTGACGGCGAAAACCGCGGCTCAATCCTCGGCAA
TCACGACCAAACAGACTTCGGACAACGCCGAGCTCTCCGCAATCGGCAAGCTCAAATCGGCGCTCTCGTCGCTGCAGACG
GCACTGAGCGGTCTGTCCGACGGCACGTCGCTCAACCAGCTCGCAGTCGCGGTCAGCGGCACGGGCGTAACGGCAACGAC
GACAACCGGCAAGGGCGCGGTGGCAGGCAACTACACGTTGCAAGTCACCAATGTCGCGACCGCCAACAAGATTTCCTCGC
AGGCCTACGCCTCGGGCGCGAGCCTCGGCAGCGGCACGCTGACGGTGGGTGTCGGCAGCAATTCCATGCAGATCAACGTG
TCGTCGTCGGATACGCTGGCGACCATCGCCAGCGCGATCAATACGGCGAACAACAATCCGGGCGTATCGGCTGCCGTCAT
TACGGCGGCCGACGGCCAGCATCTGGTCCTGACCTCGACCCAAACGGGCGCCGCCAACACCGTATCGATATCGGCGGGCG
CGGGCCTCGATGCCGGCCTCAACACGGGCAGCTTCACGCAGGTCACGGCGGGCAAGGATGCGAATTTTTCGATCGACGGC
AACGCTATCACGAGCGCGACGAACGTCATCACGTCTGCGCTGACAGGCGTGAACATCGACATCTCGGGCGCGACCGCGAA
CAGCACGCAGACCATCTCCATCACGAACGACACGTCCGCCTCCGAAAAGGCGATCAACAGCTTCGTCACCGCGTACAACA
ACTACATCACGACGGCCACCGGGCTGACGTGGGACTCGACCCAGGCGACGGGCTCGCAAGCCGGCCCGCTGCTCGGCGAT
GCAATGACGAACACGATCACGAACGGCCTCGGCAGCCTGGTCGGCGGTGGCATTACCGTCGGCGGCAAGACGATCAGCCT
GTCGTCGATCGGCATCAACCTGCAGCACGACGGCACGTTGTCCGTCGATTCGACGACGCTGGAGAACGCGCTGTCGAGCA
ACAGCTCGACCGTCGCGGCCGTGTTCAACACGACGAACGGCATCGGCACGACGCTGAACAACTTCATCAATACGTACACG
CAGACGAGCGGCACGATCGACCAGCGCACGCAAGCACTGAACACCGACCTCAGCAATCTTTCGGATCAGGCGACGCAGCT
CACGAACTATCAGAGCACGCTGACCGACCAGTACAACGCGCAGTTCTCGGCGCTGAACACGCTGATGACGACGATGCAGA
ACAACACGGCCTATCTGAACCAGCTGTTCGGCGGCGGTGGCCTGACGGGCTCGCTGAACGCCAAGTAA

Upstream 100 bases:

>100_bases
ATAAAAACAGCTGGATCGCATGGTTGGGAGGCTCGCCTCCCATCATGCATTTGAACGCCGAGAACCCAATGCAGTCCGTT
TCGCCCATCGGAGCACCCGC

Downstream 100 bases:

>100_bases
CGCGGATACGCCGCCAACCGGACCTGAAGATGAACGATTCGCTGACCCGCGCACTGGACCTGACCCGCGCTCTCGAAGAC
GCGGTTTCGCAACAAGACTG

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTTTSTSNSSTDVTALLQQAAQSIISGSTKSTLDVNSLVSALVTAKTAAQSSAITTKQTSDNAELSAIGKLKSALSSLQT
ALSGLSDGTSLNQLAVAVSGTGVTATTTTGKGAVAGNYTLQVTNVATANKISSQAYASGASLGSGTLTVGVGSNSMQINV
SSSDTLATIASAINTANNNPGVSAAVITAADGQHLVLTSTQTGAANTVSISAGAGLDAGLNTGSFTQVTAGKDANFSIDG
NAITSATNVITSALTGVNIDISGATANSTQTISITNDTSASEKAINSFVTAYNNYITTATGLTWDSTQATGSQAGPLLGD
AMTNTITNGLGSLVGGGITVGGKTISLSSIGINLQHDGTLSVDSTTLENALSSNSSTVAAVFNTTNGIGTTLNNFINTYT
QTSGTIDQRTQALNTDLSNLSDQATQLTNYQSTLTDQYNAQFSALNTLMTTMQNNTAYLNQLFGGGGLTGSLNAK

Sequences:

>Translated_475_residues
MTTTSTSNSSTDVTALLQQAAQSIISGSTKSTLDVNSLVSALVTAKTAAQSSAITTKQTSDNAELSAIGKLKSALSSLQT
ALSGLSDGTSLNQLAVAVSGTGVTATTTTGKGAVAGNYTLQVTNVATANKISSQAYASGASLGSGTLTVGVGSNSMQINV
SSSDTLATIASAINTANNNPGVSAAVITAADGQHLVLTSTQTGAANTVSISAGAGLDAGLNTGSFTQVTAGKDANFSIDG
NAITSATNVITSALTGVNIDISGATANSTQTISITNDTSASEKAINSFVTAYNNYITTATGLTWDSTQATGSQAGPLLGD
AMTNTITNGLGSLVGGGITVGGKTISLSSIGINLQHDGTLSVDSTTLENALSSNSSTVAAVFNTTNGIGTTLNNFINTYT
QTSGTIDQRTQALNTDLSNLSDQATQLTNYQSTLTDQYNAQFSALNTLMTTMQNNTAYLNQLFGGGGLTGSLNAK
>Mature_474_residues
TTTSTSNSSTDVTALLQQAAQSIISGSTKSTLDVNSLVSALVTAKTAAQSSAITTKQTSDNAELSAIGKLKSALSSLQTA
LSGLSDGTSLNQLAVAVSGTGVTATTTTGKGAVAGNYTLQVTNVATANKISSQAYASGASLGSGTLTVGVGSNSMQINVS
SSDTLATIASAINTANNNPGVSAAVITAADGQHLVLTSTQTGAANTVSISAGAGLDAGLNTGSFTQVTAGKDANFSIDGN
AITSATNVITSALTGVNIDISGATANSTQTISITNDTSASEKAINSFVTAYNNYITTATGLTWDSTQATGSQAGPLLGDA
MTNTITNGLGSLVGGGITVGGKTISLSSIGINLQHDGTLSVDSTTLENALSSNSSTVAAVFNTTNGIGTTLNNFINTYTQ
TSGTIDQRTQALNTDLSNLSDQATQLTNYQSTLTDQYNAQFSALNTLMTTMQNNTAYLNQLFGGGGLTGSLNAK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=456, Percent_Identity=30.4824561403509, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 47292; Mature: 47161

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSTSNSSTDVTALLQQAAQSIISGSTKSTLDVNSLVSALVTAKTAAQSSAITTKQTS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCC
DNAELSAIGKLKSALSSLQTALSGLSDGTSLNQLAVAVSGTGVTATTTTGKGAVAGNYTL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCEECCEEE
QVTNVATANKISSQAYASGASLGSGTLTVGVGSNSMQINVSSSDTLATIASAINTANNNP
EEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCC
GVSAAVITAADGQHLVLTSTQTGAANTVSISAGAGLDAGLNTGSFTQVTAGKDANFSIDG
CCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEECC
NAITSATNVITSALTGVNIDISGATANSTQTISITNDTSASEKAINSFVTAYNNYITTAT
CHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEC
GLTWDSTQATGSQAGPLLGDAMTNTITNGLGSLVGGGITVGGKTISLSSIGINLQHDGTL
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEEEEEEEECCCEE
SVDSTTLENALSSNSSTVAAVFNTTNGIGTTLNNFINTYTQTSGTIDQRTQALNTDLSNL
EECCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
SDQATQLTNYQSTLTDQYNAQFSALNTLMTTMQNNTAYLNQLFGGGGLTGSLNAK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TTTSTSNSSTDVTALLQQAAQSIISGSTKSTLDVNSLVSALVTAKTAAQSSAITTKQTS
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCC
DNAELSAIGKLKSALSSLQTALSGLSDGTSLNQLAVAVSGTGVTATTTTGKGAVAGNYTL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCEECCEEE
QVTNVATANKISSQAYASGASLGSGTLTVGVGSNSMQINVSSSDTLATIASAINTANNNP
EEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCC
GVSAAVITAADGQHLVLTSTQTGAANTVSISAGAGLDAGLNTGSFTQVTAGKDANFSIDG
CCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEECC
NAITSATNVITSALTGVNIDISGATANSTQTISITNDTSASEKAINSFVTAYNNYITTAT
CHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEC
GLTWDSTQATGSQAGPLLGDAMTNTITNGLGSLVGGGITVGGKTISLSSIGINLQHDGTL
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEEEEEEEECCCEE
SVDSTTLENALSSNSSTVAAVFNTTNGIGTTLNNFINTYTQTSGTIDQRTQALNTDLSNL
EECCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
SDQATQLTNYQSTLTDQYNAQFSALNTLMTTMQNNTAYLNQLFGGGGLTGSLNAK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]