| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aqpZ [H]
Identifier: 186477728
GI number: 186477728
Start: 3340296
End: 3341045
Strand: Direct
Name: aqpZ [H]
Synonym: Bphy_2982
Alternate gene names: 186477728
Gene position: 3340296-3341045 (Clockwise)
Preceding gene: 186477726
Following gene: 186477731
Centisome position: 96.01
GC content: 64.27
Gene sequence:
>750_bases ATGAACCTCTTCAAGCGCCTCGCGGCGGAGCTGTTCGGCACTTTTTGGCTCGTTCTCGGAGGTTGCGGCAGCGCCGTGCT CGCGGCAAATTTCGCCGGCCCGGTTCATGGGCTCGGCATCGGATTCGTGGGCGTGTCGCTCGCGTTCGGCCTGACTGTCC TGACCATGGCTTATGCAATCGGACATATTTCTGGTTGTCATCTGAATCCGGCCGTCAGCGTCGGGTTGACCGTCGCGGGC CGCTTCCCGGCGCGTGACCTAACGCCGTACGTCGTCGCGCAGGTGCTGGGCGCCGTGCTTGGCGCGTATGTGCTGTCCGT GATTGCTTCGGGCAATCCGGATTTCCATCTGGTTGCAAGCGGCTTCGCGAGCAACGGCTACGGCGACCGCTCGCCGGGCC ACTATGCGTTGCCTGCCGCGTTTGTGTGCGAAACGGTGATGACGGCTTTCTTCCTGTTCGTCATTCTCGGTGCCACCGAC AAGCGCGCGCCTGTCGGCTTCGCGCCCATCGCGATCGGCCTGTGCCTTACCTTGATCCACCTGATCTCGATTCCCGTCAC CAATACGTCGGTGAATCCGGCGCGCTCGACGGGTCCGGCGCTGTTCGTCGGCGGTGCGGCTGTCGATCAGTTGTGGCTAT TCTGGGTCGCACCTATTCTCGGCGCCGTGATCGCCGGCGTGGTGTATCCGCTGCTTGCCGGCGGCGCGCAGCACGCCGTG GAAGCCGAGCGCGAGCGTGTGACGGCGTAA
Upstream 100 bases:
>100_bases GTGCATTTGTGCAACGTTGCTTAAAATTTTTGCTCGCAAGTGCCGGGCAGCGGCGCATGCGCTCTCGTCCTTGAATCCCT GCACTTATTAGGATTACACA
Downstream 100 bases:
>100_bases TTAGCCGCTATCCAGTCTGCGTGAAAACGGGGCGCTTCGGCGCCCCGTTTGCTTGTATGTCCAAATGTAAGGCTGGTTCA GGATGGCGTTCGCCGTCTTT
Product: aquaporin Z
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNLFKRLAAELFGTFWLVLGGCGSAVLAANFAGPVHGLGIGFVGVSLAFGLTVLTMAYAIGHISGCHLNPAVSVGLTVAG RFPARDLTPYVVAQVLGAVLGAYVLSVIASGNPDFHLVASGFASNGYGDRSPGHYALPAAFVCETVMTAFFLFVILGATD KRAPVGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGAAVDQLWLFWVAPILGAVIAGVVYPLLAGGAQHAV EAERERVTA
Sequences:
>Translated_249_residues MNLFKRLAAELFGTFWLVLGGCGSAVLAANFAGPVHGLGIGFVGVSLAFGLTVLTMAYAIGHISGCHLNPAVSVGLTVAG RFPARDLTPYVVAQVLGAVLGAYVLSVIASGNPDFHLVASGFASNGYGDRSPGHYALPAAFVCETVMTAFFLFVILGATD KRAPVGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGAAVDQLWLFWVAPILGAVIAGVVYPLLAGGAQHAV EAERERVTA >Mature_249_residues MNLFKRLAAELFGTFWLVLGGCGSAVLAANFAGPVHGLGIGFVGVSLAFGLTVLTMAYAIGHISGCHLNPAVSVGLTVAG RFPARDLTPYVVAQVLGAVLGAYVLSVIASGNPDFHLVASGFASNGYGDRSPGHYALPAAFVCETVMTAFFLFVILGATD KRAPVGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGAAVDQLWLFWVAPILGAVIAGVVYPLLAGGAQHAV EAERERVTA
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI4755125, Length=231, Percent_Identity=34.6320346320346, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI4502181, Length=230, Percent_Identity=34.3478260869565, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI37694062, Length=192, Percent_Identity=35.9375, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI4502183, Length=228, Percent_Identity=35.5263157894737, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4502179, Length=223, Percent_Identity=32.7354260089686, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI6912506, Length=235, Percent_Identity=32.7659574468085, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI157266307, Length=249, Percent_Identity=30.5220883534137, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI4826645, Length=270, Percent_Identity=32.2222222222222, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI86792455, Length=188, Percent_Identity=31.3829787234043, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI45446752, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI4502187, Length=254, Percent_Identity=26.7716535433071, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI22538420, Length=248, Percent_Identity=28.6290322580645, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1787101, Length=213, Percent_Identity=67.1361502347418, Blast_Score=274, Evalue=3e-75, Organism=Escherichia coli, GI1790362, Length=268, Percent_Identity=29.1044776119403, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71993722, Length=253, Percent_Identity=31.6205533596838, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71992966, Length=241, Percent_Identity=29.8755186721992, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17558372, Length=223, Percent_Identity=29.1479820627803, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17531431, Length=261, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17531429, Length=261, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71994009, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321054, Length=214, Percent_Identity=29.9065420560748, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24652747, Length=233, Percent_Identity=33.9055793991416, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI45551084, Length=233, Percent_Identity=33.9055793991416, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24652751, Length=191, Percent_Identity=36.1256544502618, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI19922038, Length=191, Percent_Identity=36.1256544502618, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI45550503, Length=241, Percent_Identity=28.2157676348548, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762344, Length=236, Percent_Identity=30.9322033898305, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24762346, Length=236, Percent_Identity=30.9322033898305, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24762348, Length=236, Percent_Identity=30.9322033898305, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI20130305, Length=236, Percent_Identity=30.9322033898305, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 25502; Mature: 25502
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFKRLAAELFGTFWLVLGGCGSAVLAANFAGPVHGLGIGFVGVSLAFGLTVLTMAYAI CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHISGCHLNPAVSVGLTVAGRFPARDLTPYVVAQVLGAVLGAYVLSVIASGNPDFHLVAS HHCCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC GFASNGYGDRSPGHYALPAAFVCETVMTAFFLFVILGATDKRAPVGFAPIAIGLCLTLIH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LISIPVTNTSVNPARSTGPALFVGGAAVDQLWLFWVAPILGAVIAGVVYPLLAGGAQHAV HHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAERERVTA HHHHHHCCC >Mature Secondary Structure MNLFKRLAAELFGTFWLVLGGCGSAVLAANFAGPVHGLGIGFVGVSLAFGLTVLTMAYAI CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHISGCHLNPAVSVGLTVAGRFPARDLTPYVVAQVLGAVLGAYVLSVIASGNPDFHLVAS HHCCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC GFASNGYGDRSPGHYALPAAFVCETVMTAFFLFVILGATDKRAPVGFAPIAIGLCLTLIH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LISIPVTNTSVNPARSTGPALFVGGAAVDQLWLFWVAPILGAVIAGVVYPLLAGGAQHAV HHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAERERVTA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]