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The map label for this gene is cheD [H]

Identifier: 186477716

GI number: 186477716

Start: 3327194

End: 3327985

Strand: Reverse

Name: cheD [H]

Synonym: Bphy_2970

Alternate gene names: 186477716

Gene position: 3327985-3327194 (Counterclockwise)

Preceding gene: 186477717

Following gene: 186477715

Centisome position: 95.65

GC content: 66.16

Gene sequence:

>792_bases
ATGAGCGGCCTGCCCATCGCCACCAACCTGTATTTCGACAACCACTTCAAGCGCCCCGGCGTGAAGCTGCTGCCGAACGA
GTTCTACACGACGCACGACGACATGGTGCTCGTCACGGTGCTCGGCTCGTGCGTGGCGGCGTGCATTCAGGATCGGACGG
CAGGCATCGGCGGCATGAATCACTTCATGCTGCCCGACGACGGCGCCGATGTCGCGCAAGCTGCCTCCGATTCGATGCGC
TACGGCGCCTACGCGATGGAAGTGCTGATCAACGAACTGATCAAGGCGGGCGGCCGCCGCGAGCGTTTCGAGGCGAAGGT
GTTCGGCGGCGCGGCCGTGCTGGCGGGCATGACGACGATGAACATCGGCGATCGCAACTCGGCGTTCGTGCGCCGTTACC
TCGCGCTCGAAAAAATCCGCATCGTCGCCGAAGACCTGGAAGGCAAGCATCCGCGCAAGGTCGCGTTCATGCCGCGCACG
GGTCAGGTGATGGTGAAGAAACTGCGTCTGCAGCAGGAAGAGGGCGTCGCCGAGCGCGAACAGGCGCTCGCACGTCAAAC
GGCCGAAGAGCGCGCCGAGCGGCTTGCGAAAGCCCGTGCGCGCGTCGAGCTGTTCTCGTCGCCTGCCGCCGCGAAACCGC
GCATCGAACTGTTCGGGGCCGGCGCAGCGTCGGGCGCAGGCGTAGCGACGGGCACGGCGCGCCCGGCCGGCGCGAAGCCC
CGTATCGAACTATTTGGCGCGACCGCGCGCCCGACTCAACCAAATAACGCCAGGACTGTAGAGGAGGCGTGA

Upstream 100 bases:

>100_bases
GGCTGCGCGGCCAGACCGTCTATGAGCTGACGCGCGACACGGGCGCGAGCCGTACGGCCCAGCGTGCGTCGAGCCACGGT
GTGACGAGCGGGGTGCCAGC

Downstream 100 bases:

>100_bases
TCGCTGTGCAAAAGATCAAAGTATTGTGCGTCGACGATTCGGCGTTGATTCGTAGCTTGATGACGGAAATCATCAATAGT
CAGCCCGACATGACGGTCGT

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSGLPIATNLYFDNHFKRPGVKLLPNEFYTTHDDMVLVTVLGSCVAACIQDRTAGIGGMNHFMLPDDGADVAQAASDSMR
YGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTMNIGDRNSAFVRRYLALEKIRIVAEDLEGKHPRKVAFMPRT
GQVMVKKLRLQQEEGVAEREQALARQTAEERAERLAKARARVELFSSPAAAKPRIELFGAGAASGAGVATGTARPAGAKP
RIELFGATARPTQPNNARTVEEA

Sequences:

>Translated_263_residues
MSGLPIATNLYFDNHFKRPGVKLLPNEFYTTHDDMVLVTVLGSCVAACIQDRTAGIGGMNHFMLPDDGADVAQAASDSMR
YGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTMNIGDRNSAFVRRYLALEKIRIVAEDLEGKHPRKVAFMPRT
GQVMVKKLRLQQEEGVAEREQALARQTAEERAERLAKARARVELFSSPAAAKPRIELFGAGAASGAGVATGTARPAGAKP
RIELFGATARPTQPNNARTVEEA
>Mature_262_residues
SGLPIATNLYFDNHFKRPGVKLLPNEFYTTHDDMVLVTVLGSCVAACIQDRTAGIGGMNHFMLPDDGADVAQAASDSMRY
GAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTMNIGDRNSAFVRRYLALEKIRIVAEDLEGKHPRKVAFMPRTG
QVMVKKLRLQQEEGVAEREQALARQTAEERAERLAKARARVELFSSPAAAKPRIELFGAGAASGAGVATGTARPAGAKPR
IELFGATARPTQPNNARTVEEA

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 28403; Mature: 28272

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPIATNLYFDNHFKRPGVKLLPNEFYTTHDDMVLVTVLGSCVAACIQDRTAGIGGMN
CCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
HFMLPDDGADVAQAASDSMRYGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCEE
NIGDRNSAFVRRYLALEKIRIVAEDLEGKHPRKVAFMPRTGQVMVKKLRLQQEEGVAERE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHH
QALARQTAEERAERLAKARARVELFSSPAAAKPRIELFGAGAASGAGVATGTARPAGAKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
RIELFGATARPTQPNNARTVEEA
CEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGLPIATNLYFDNHFKRPGVKLLPNEFYTTHDDMVLVTVLGSCVAACIQDRTAGIGGMN
CCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
HFMLPDDGADVAQAASDSMRYGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCEE
NIGDRNSAFVRRYLALEKIRIVAEDLEGKHPRKVAFMPRTGQVMVKKLRLQQEEGVAERE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHH
QALARQTAEERAERLAKARARVELFSSPAAAKPRIELFGAGAASGAGVATGTARPAGAKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
RIELFGATARPTQPNNARTVEEA
CEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA