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The map label for this gene is flgF [H]

Identifier: 186477698

GI number: 186477698

Start: 3305175

End: 3305933

Strand: Direct

Name: flgF [H]

Synonym: Bphy_2952

Alternate gene names: 186477698

Gene position: 3305175-3305933 (Clockwise)

Preceding gene: 186477697

Following gene: 186477699

Centisome position: 95.0

GC content: 66.53

Gene sequence:

>759_bases
ATGGACCGGCTCATATACACCGCGATGTCGGGCGCGACCCAGGCGCTCGAACAGCAGGCCGTGGTCGCGAACAACCTCGC
GAACACCTCGACCACGGGTTTCAAGGCGCAGCTCGCGACGTTCCGCGCCGTGCCGATGGCGTTCGGCGACGGCAGCACGA
TTCAGGACGACACCACTCGCACTTTTGTGCTGTCGTCCACGCCGGGCGCGGATTACACGCCCGGCCCGATCCAGCAGACG
GGCAACCCGCTCGACGTCGCGATCCAGGGTCCGGGCTGGCTGTCCGTTTTGACGCCTGACGGCGAGGAAGCGTACACGCG
TGCAGGCAACCTTCATGTCGACGAAAACGGCCAGCTCGTGACGGCCAACAACCTGCCCGTGGTCGGCGGCGGCGGCCCGG
TGGCCGTGCCACCCGGCGCGCAGGTGACCATCGGCAAGGACGGCACCGTATCGGCGCTGATGCCGGGCGACCCCGCCACG
ACGATCGCACTGGTCGATCAGTTGAAGCTGGTGAATCCCGCCCCCGGCGCGCTCAAGCGCGGCGACGACGGCCTCTTTCA
CACGAACGACGGCAATCCCGCCGACGCCGATCCCGCTGTGGTCGTCGCGGCAGGCGCGCTGGAAGGCAGCAACGTGAACC
CGGTATCGGCGATGGTCTCGATGATCACCAACGCTCGCCAGTTCCAGATGCAGACGAAGATGATCGAGTCCGCCGACCAG
AACGAGCAGTCGGCCAACAAGCTGCTGAACTTCAGCTAA

Upstream 100 bases:

>100_bases
GCGCAACGCAATTACCAGGCGAACGCGCAGACGATCAAGACCCAGCAGACCGTCGACCAGACGCTCATCAACCTGTAATC
GCTGACGTACCGACACCATC

Downstream 100 bases:

>100_bases
TCCCGACGCAGATTTAACGGAACGCACCACCCTGCGTTCAGGAGAAACAAGTGAACCGCTCACTCTATATCGCCGCGACC
GGCATGAATGCGCAACAGGC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLVTANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPAT
TIALVDQLKLVNPAPGALKRGDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ
NEQSANKLLNFS

Sequences:

>Translated_252_residues
MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLVTANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPAT
TIALVDQLKLVNPAPGALKRGDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ
NEQSANKLLNFS
>Mature_252_residues
MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLVTANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPAT
TIALVDQLKLVNPAPGALKRGDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ
NEQSANKLLNFS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=258, Percent_Identity=53.4883720930233, Blast_Score=248, Evalue=4e-67,
Organism=Escherichia coli, GI1787318, Length=245, Percent_Identity=34.6938775510204, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25917; Mature: 25917

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTR
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHEEEEEEECCCCEECCCCCE
TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLV
EEEEECCCCCCCCCCCHHHCCCCEEEEEECCCEEEEECCCCHHHHHCCCCEEECCCCCEE
TANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPATTIALVDQLKLVNPAPGALKR
EECCCEEEECCCCEEECCCCEEEECCCCCEEEEECCCCCHHHEEEHHHHCCCCCCCCCCC
GDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ
CCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC
NEQSANKLLNFS
CHHHHHHHCCCC
>Mature Secondary Structure
MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTR
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHEEEEEEECCCCEECCCCCE
TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLV
EEEEECCCCCCCCCCCHHHCCCCEEEEEECCCEEEEECCCCHHHHHCCCCEEECCCCCEE
TANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPATTIALVDQLKLVNPAPGALKR
EECCCEEEECCCCEEECCCCEEEECCCCCEEEEECCCCCHHHEEEHHHHCCCCCCCCCCC
GDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ
CCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC
NEQSANKLLNFS
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]