| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flgM [C]
Identifier: 186477692
GI number: 186477692
Start: 3299903
End: 3300244
Strand: Reverse
Name: flgM [C]
Synonym: Bphy_2946
Alternate gene names: 186477692
Gene position: 3300244-3299903 (Counterclockwise)
Preceding gene: 186477693
Following gene: 186477691
Centisome position: 94.86
GC content: 64.04
Gene sequence:
>342_bases GTGAAAGTTGATTCCACTCCCCATTCAGGCCTGCAGACGTTGAAAGACGGCCTGCAGCGCACGCAGCAAGGCGACACCCC GACGACGGGCGGTGTCGGTGCGTCGACGTCGACGGCCACGGGCGCGTCGGGTGACGCGAGTGTCAATCTGTCGGGACTGT CGTCGCAGTTGCACAGCCTCGCGAGCGCCGGTTCGTCGGACATCGACACGTCGCATGTCGCGTCGATCAAGCAGGCGATC AAGGACGGTACGTTGACGATCGACTCCGGAAAGATCGCCGACGGCGTGCTGGCAACGGCGCGCGACCTGTTGCAGAAGAA GAGCCAGTCGTCCGGCAACTGA
Upstream 100 bases:
>100_bases AATTGCGGTGGTTACAACCTGAAAAATGTGTCGGATCGGCTCAGCTAAAGTTCGATGGATGAATGCCGTTATTACATTCA AATCGTTCAGGAAGCCGATC
Downstream 100 bases:
>100_bases CGACGCATCGATGAACGGTGCGCCGGGTGCGGGGCGGTATTTGTGACAAATCCGGGCTGCGAAAGACGCAATCCGGTGCC TAGCGAGTTGTTTTGTGATG
Product: anti-sigma28 factor FlgM
Products: NA
Alternate protein names: Anti-Sigma-28 Factor FlgM Family Protein; Negative Regulator Of Flagellin Synthesis FlgM
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKVDSTPHSGLQTLKDGLQRTQQGDTPTTGGVGASTSTATGASGDASVNLSGLSSQLHSLASAGSSDIDTSHVASIKQAI KDGTLTIDSGKIADGVLATARDLLQKKSQSSGN
Sequences:
>Translated_113_residues MKVDSTPHSGLQTLKDGLQRTQQGDTPTTGGVGASTSTATGASGDASVNLSGLSSQLHSLASAGSSDIDTSHVASIKQAI KDGTLTIDSGKIADGVLATARDLLQKKSQSSGN >Mature_113_residues MKVDSTPHSGLQTLKDGLQRTQQGDTPTTGGVGASTSTATGASGDASVNLSGLSSQLHSLASAGSSDIDTSHVASIKQAI KDGTLTIDSGKIADGVLATARDLLQKKSQSSGN
Specific function: Responsible For The Coupling Of Flagellin Expression To Flagellar Assembly By Preventing Expression Of The Flagellin Genes When A Component Of The Middle Class Of Proteins Is Defective. It Negatively Regulates Flagellar Genes By Inhibiting The Activity O
COG id: COG2747
COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11224; Mature: 11224
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDSTPHSGLQTLKDGLQRTQQGDTPTTGGVGASTSTATGASGDASVNLSGLSSQLHSL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH ASAGSSDIDTSHVASIKQAIKDGTLTIDSGKIADGVLATARDLLQKKSQSSGN HHCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKVDSTPHSGLQTLKDGLQRTQQGDTPTTGGVGASTSTATGASGDASVNLSGLSSQLHSL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH ASAGSSDIDTSHVASIKQAIKDGTLTIDSGKIADGVLATARDLLQKKSQSSGN HHCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA