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The map label for this gene is ydgJ [C]

Identifier: 186477634

GI number: 186477634

Start: 3240799

End: 3241953

Strand: Direct

Name: ydgJ [C]

Synonym: Bphy_2886

Alternate gene names: 186477634

Gene position: 3240799-3241953 (Clockwise)

Preceding gene: 186477633

Following gene: 186477636

Centisome position: 93.15

GC content: 65.37

Gene sequence:

>1155_bases
ATGGTGACAGGCACAATGGGCCGGCGTATCCGGCTGGGGTTGATCGGCGGTGGCCCGGGATCGTTCATCGGCGAGACGCA
CCGCATCGCAGCACGCCTCGACGGCCACTACGACATCGTTGCGGCGGCGCTGTCGTCCCATCCCGATCGCGCGAGACAGG
CGGCGCTGGAACTCGGCGTCGACGGCGAACGCGCCTACACGTCATGGCAACAGATGCTCGACACGGAAGCGGCTCGCCCC
GATCGCATCGATGCCGTCGCGGTCATGACGCCCAATGACTCCCATCACCCGATCTGCATGCTGGCGCTCGAGCGCGGCTT
TCACGTGATCTGCGACAAGCCGCTCGCGAACGATCTCGCGCAGGCTCGCGAAATCGCCGCCTGCGCGAAGGCGGCCAATG
CCGAGTTCTGCGTGACCTATTGCTACACCGGCTTTCCGATGGTGCGCCAGGCGCGCGACATGATACGCGCCGGCGAACTC
GGCGAGATCCGTCAGGTGCATCTGCAGTACGTGCAGAGCTATCTGGCGGGCCACGATCAGACGGCGGGCTGGCGAACGGA
AGCGGGCCGCGCCGGCAGTTCGCTCGTGCTGATGGATATCGGCACTCACGCGTTTCATCTGGGCGCGTATGTCACGGGGC
TGGATGTCACGCGTCTGTGCGCGGATGTCGGCTCGGCGATTCCCGAGCGCGCCTTCGACGATTACGTGTCCGCGCTGCTG
CACTATGAGAACGGCGCGCGCGGCTCCCTGTGGGTGACGAATGCCGCAGCAGGTTCCGAGCACGGGTTGAGTTTCCGCGT
TCACGGCGACAAGGGCGGACTCGAATGGCATCAGGAGGAACCGAACCGGCTGATTCATCGCCGGCACGATGCGTTCGACG
AAATCATCACGCGCCGACTCGGTCCGTCCACGAGCGAAGGCGCGCGGCGCTCGACGCGCATCGCGATCGGCCATCCCGAA
GGATATCTGGAAGCGTTTGCGAATCTTTATACGGAGTTCGCACAGCGCGTCGCGGCACGGATCGATGGAAAACCCGGTGA
CGAGCGGCCGACGCTCTTTCCAGGCGTCAGCGATGGCGTGAAGGGACTCGCGTTCGTCGCGGCATCGGTGAAGAGCATGG
CGACGGGCGGATGGCAAGATGTCGAGCGCGCGTAG

Upstream 100 bases:

>100_bases
GGCGCTCAGTGAAGACTGGCCGGACGAGCAGTTCGCCGCCGCGCTGCACGATCTCGAATTCCGCAACGCGACGCATTGAA
TTCCCCACCAAGGAGGCAGC

Downstream 100 bases:

>100_bases
GCTGGCTCGCTGGAAGAAAAAAGAGCCCTGTTCCGCGGGGGAACAGGGCTCGGTGGATGAGACATATCGAACAGGCGCGT
GGATGCTTGCCGACTGCTGC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVTGTMGRRIRLGLIGGGPGSFIGETHRIAARLDGHYDIVAAALSSHPDRARQAALELGVDGERAYTSWQQMLDTEAARP
DRIDAVAVMTPNDSHHPICMLALERGFHVICDKPLANDLAQAREIAACAKAANAEFCVTYCYTGFPMVRQARDMIRAGEL
GEIRQVHLQYVQSYLAGHDQTAGWRTEAGRAGSSLVLMDIGTHAFHLGAYVTGLDVTRLCADVGSAIPERAFDDYVSALL
HYENGARGSLWVTNAAAGSEHGLSFRVHGDKGGLEWHQEEPNRLIHRRHDAFDEIITRRLGPSTSEGARRSTRIAIGHPE
GYLEAFANLYTEFAQRVAARIDGKPGDERPTLFPGVSDGVKGLAFVAASVKSMATGGWQDVERA

Sequences:

>Translated_384_residues
MVTGTMGRRIRLGLIGGGPGSFIGETHRIAARLDGHYDIVAAALSSHPDRARQAALELGVDGERAYTSWQQMLDTEAARP
DRIDAVAVMTPNDSHHPICMLALERGFHVICDKPLANDLAQAREIAACAKAANAEFCVTYCYTGFPMVRQARDMIRAGEL
GEIRQVHLQYVQSYLAGHDQTAGWRTEAGRAGSSLVLMDIGTHAFHLGAYVTGLDVTRLCADVGSAIPERAFDDYVSALL
HYENGARGSLWVTNAAAGSEHGLSFRVHGDKGGLEWHQEEPNRLIHRRHDAFDEIITRRLGPSTSEGARRSTRIAIGHPE
GYLEAFANLYTEFAQRVAARIDGKPGDERPTLFPGVSDGVKGLAFVAASVKSMATGGWQDVERA
>Mature_384_residues
MVTGTMGRRIRLGLIGGGPGSFIGETHRIAARLDGHYDIVAAALSSHPDRARQAALELGVDGERAYTSWQQMLDTEAARP
DRIDAVAVMTPNDSHHPICMLALERGFHVICDKPLANDLAQAREIAACAKAANAEFCVTYCYTGFPMVRQARDMIRAGEL
GEIRQVHLQYVQSYLAGHDQTAGWRTEAGRAGSSLVLMDIGTHAFHLGAYVTGLDVTRLCADVGSAIPERAFDDYVSALL
HYENGARGSLWVTNAAAGSEHGLSFRVHGDKGGLEWHQEEPNRLIHRRHDAFDEIITRRLGPSTSEGARRSTRIAIGHPE
GYLEAFANLYTEFAQRVAARIDGKPGDERPTLFPGVSDGVKGLAFVAASVKSMATGGWQDVERA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581117, Length=285, Percent_Identity=25.2631578947368, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581115, Length=171, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41685; Mature: 41685

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTGTMGRRIRLGLIGGGPGSFIGETHRIAARLDGHYDIVAAALSSHPDRARQAALELGV
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCC
DGERAYTSWQQMLDTEAARPDRIDAVAVMTPNDSHHPICMLALERGFHVICDKPLANDLA
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHH
QAREIAACAKAANAEFCVTYCYTGFPMVRQARDMIRAGELGEIRQVHLQYVQSYLAGHDQ
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
TAGWRTEAGRAGSSLVLMDIGTHAFHLGAYVTGLDVTRLCADVGSAIPERAFDDYVSALL
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
HYENGARGSLWVTNAAAGSEHGLSFRVHGDKGGLEWHQEEPNRLIHRRHDAFDEIITRRL
HHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPSTSEGARRSTRIAIGHPEGYLEAFANLYTEFAQRVAARIDGKPGDERPTLFPGVSDGV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KGLAFVAASVKSMATGGWQDVERA
HHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MVTGTMGRRIRLGLIGGGPGSFIGETHRIAARLDGHYDIVAAALSSHPDRARQAALELGV
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCC
DGERAYTSWQQMLDTEAARPDRIDAVAVMTPNDSHHPICMLALERGFHVICDKPLANDLA
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHH
QAREIAACAKAANAEFCVTYCYTGFPMVRQARDMIRAGELGEIRQVHLQYVQSYLAGHDQ
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
TAGWRTEAGRAGSSLVLMDIGTHAFHLGAYVTGLDVTRLCADVGSAIPERAFDDYVSALL
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
HYENGARGSLWVTNAAAGSEHGLSFRVHGDKGGLEWHQEEPNRLIHRRHDAFDEIITRRL
HHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPSTSEGARRSTRIAIGHPEGYLEAFANLYTEFAQRVAARIDGKPGDERPTLFPGVSDGV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KGLAFVAASVKSMATGGWQDVERA
HHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]