| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yjiJ [C]
Identifier: 186477631
GI number: 186477631
Start: 3236467
End: 3237642
Strand: Reverse
Name: yjiJ [C]
Synonym: Bphy_2883
Alternate gene names: 186477631
Gene position: 3237642-3236467 (Counterclockwise)
Preceding gene: 186477635
Following gene: 186477630
Centisome position: 93.06
GC content: 68.03
Gene sequence:
>1176_bases ATGGGCAGCGCGATCGCGCTCGGGCTCGCGCGCTTTTCCTATGCATTGCTGCTGCCGCCGATGAAAATCGACCTCGGCTG GAGCTTCGCGCAATCGGGGGCGATGAACACGGCGAACGCGCTCGGCTATCTGCTCGGCGCGCTCGCGTTCACGCGCATGT CGCGCCGCTGGTCGGCGGGCGTGCTGTGCGTGGCGGGATGCATCGCAACCGCGTTGCTGATGGCGATCACGGGGATGCTG ACCGATACGAACGCGCTGTTGGCGCAGCGCGTCGCCACGGGCATCGCGAGCGCCTTCGTTTTCGTGAGCGGCGGCGTGCT GGCAGCGCGGCTCGCGACAGCGCATCCGCGCGACGCGGGGCTGGTGCTCGGTCTGTACTACGGCGGCACGGGGTGGGGCA TCGTCGCATCGGCGCTGCTCGTGCCGCTGGCGCTCGCTTCGTTTTCGTCGCTGCATCGCGCGCATGTCTGGCAGCTTGCG TGGTTCGCGCTCGCGGCGGCGTGCGTCGCGTTCTCTTTGCTCGCGGGGCGCGCGGCGCGGCGTATCGACAGGCAGCACGT GCTGCGCACGGAGACGACGAGCGTTGCGTCGGCGGCCGGGCGCGCGCCCGCGACGATGCGTTATGCGTTCGCGCTTGCCG GTTACGGGTTGTTCGGCGTCGGCTACATCGGCTACATGACGTTCATCGTCGCGCTGCTGCGCAACGGCGGCATGAGCGCA GGCGTCGTCACGGGCTTTTATGTGCTGCTGGGCGTCGCAACGATCGTGTCGGCGCGCATCTGGTCGAGGCTGCTCGATCG CACGCGCGGCGGCCAGGCGCTCGCATTGCTCAATGCGTTGCTCGCGCTTGCGACGCTGATGCCCGCAATCGTTGCGCATC CCGTCGTTGCGTTTGCGTCGGGCTTGTTGTTCGGCGCGACGTTCCTGTCGGCCGTTGCTTCGACGACGGCTTTCGTGCGT CACAATCTGCCCGCCGCGCACTGGGGCCGCGGCATCAGCGCATTCACGATCGTGTTTGCGTTCGGACAGATCGTCGGGCC AACCGTGATCGGCTGGGTGTCGGACGGCGTGGGCCTCGAGCGCGGCCTGGTTTATTCCGCATGCGTGCTCGCGGCAGGCG CGGTGCTTGCTGGACTACAGAAAGCATTGACCCGACGCGCCCCTTCGGTGAACTGA
Upstream 100 bases:
>100_bases GCATACGCAACCCGCGTCGGCGCCGCGAGTTGCTCACGACGCTGGCATTGCCGATTCGCCGCGGCGCGGTCGGGCGCTCT GGCTGGCCGTATGCCTCTCA
Downstream 100 bases:
>100_bases CGTTTTGCCGAAGCGCCGCACGACGGATGACAGCATTTTCAATGCCATTTCACGCGCCGCGCGGCCTTTTCACCTGTTGC GTTGAGGTCGCCAGCGCACA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MGSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAGVLCVAGCIATALLMAITGML TDTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAGLVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLA WFALAAACVAFSLLAGRAARRIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSA GVVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFASGLLFGATFLSAVASTTAFVR HNLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGVGLERGLVYSACVLAAGAVLAGLQKALTRRAPSVN
Sequences:
>Translated_391_residues MGSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAGVLCVAGCIATALLMAITGML TDTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAGLVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLA WFALAAACVAFSLLAGRAARRIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSA GVVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFASGLLFGATFLSAVASTTAFVR HNLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGVGLERGLVYSACVLAAGAVLAGLQKALTRRAPSVN >Mature_390_residues GSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAGVLCVAGCIATALLMAITGMLT DTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAGLVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLAW FALAAACVAFSLLAGRAARRIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSAG VVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFASGLLFGATFLSAVASTTAFVRH NLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGVGLERGLVYSACVLAAGAVLAGLQKALTRRAPSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40360; Mature: 40229
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAG CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VLCVAGCIATALLMAITGMLTDTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC LVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLAWFALAAACVAFSLLAGRAAR EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GVVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLFGATFLSAVASTTAFVRHNLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGVGLE HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RGLVYSACVLAAGAVLAGLQKALTRRAPSVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAG CCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VLCVAGCIATALLMAITGMLTDTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC LVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLAWFALAAACVAFSLLAGRAAR EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GVVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLFGATFLSAVASTTAFVRHNLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGVGLE HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RGLVYSACVLAAGAVLAGLQKALTRRAPSVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA