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The map label for this gene is ybcL [H]

Identifier: 186477621

GI number: 186477621

Start: 3228145

End: 3228762

Strand: Direct

Name: ybcL [H]

Synonym: Bphy_2873

Alternate gene names: 186477621

Gene position: 3228145-3228762 (Clockwise)

Preceding gene: 186477619

Following gene: 186477622

Centisome position: 92.78

GC content: 62.78

Gene sequence:

>618_bases
ATGCGCTTGCGTTGCACGGTCGTTCCGCCCGCTTCGTTACGTTCGTTCCAGCCGTTTCTGAATTTTGTGCCGATGTTCGC
CGCTTTGCTCGTCGCCGTCCTGTTGGCGCCTTACGCTTCGGCGGTCCGTGCAGACACCGTCTTCACGGTCACGAGCGCGA
ACCTTCGCGCAGGCGCCACCGTGGACAATGCGCAGGTACTCGACCGATACGACTGCAAGGGGCAAAACCGTTCGCCACAA
CTTAGCTGGCACAACCCGCCCGACGGCACACGCAGCTTTGCGGTCACGATGTTCGATCCTGATGCACCCGGACGCGGCTG
GTGGCATTGGGCCGTCACGGGCATTCCCGCGACCGTCGATCGATTGCCGGAAAACGCGAGCGCGTCCGGCTTTCTTAAGA
AGCTCGGCGCCGTCGAGGCGCGCAACGATTTCGACATCGACGGCTATGGCGGCCCGTGCCCGCCGCCCGGCAAGCCGCAT
CGGTATGTGATTACGGTGTATGCGCTGAACACGTCCAATCTCAGGCTCGCGCAGGGTCGGCCGTCGCTGATGTTCGACCA
TGAAATCAGCACTGCAACGCTCGGCTACGCACGCATGATCGTCACGTACGGCCGCTAG

Upstream 100 bases:

>100_bases
TAAGATGTAATGTTAGACTCGATTCGTCGCTTGGGCACTAAAAAGGACAACAATCCCTCGTAAAGACAATTCTTTGCGAC
CCTGACAGGAGATTCGGCAC

Downstream 100 bases:

>100_bases
AATTCGTCGCCGTTTTAGGAGCGGCGTGACCTCTTCTCCACGACTCCCGAAGCAGCGACGTCGTTCGCTGATTAGACTTA
CGTTAATTCTCGCAACGATG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRLRCTVVPPASLRSFQPFLNFVPMFAALLVAVLLAPYASAVRADTVFTVTSANLRAGATVDNAQVLDRYDCKGQNRSPQ
LSWHNPPDGTRSFAVTMFDPDAPGRGWWHWAVTGIPATVDRLPENASASGFLKKLGAVEARNDFDIDGYGGPCPPPGKPH
RYVITVYALNTSNLRLAQGRPSLMFDHEISTATLGYARMIVTYGR

Sequences:

>Translated_205_residues
MRLRCTVVPPASLRSFQPFLNFVPMFAALLVAVLLAPYASAVRADTVFTVTSANLRAGATVDNAQVLDRYDCKGQNRSPQ
LSWHNPPDGTRSFAVTMFDPDAPGRGWWHWAVTGIPATVDRLPENASASGFLKKLGAVEARNDFDIDGYGGPCPPPGKPH
RYVITVYALNTSNLRLAQGRPSLMFDHEISTATLGYARMIVTYGR
>Mature_205_residues
MRLRCTVVPPASLRSFQPFLNFVPMFAALLVAVLLAPYASAVRADTVFTVTSANLRAGATVDNAQVLDRYDCKGQNRSPQ
LSWHNPPDGTRSFAVTMFDPDAPGRGWWHWAVTGIPATVDRLPENASASGFLKKLGAVEARNDFDIDGYGGPCPPPGKPH
RYVITVYALNTSNLRLAQGRPSLMFDHEISTATLGYARMIVTYGR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=178, Percent_Identity=39.8876404494382, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=35.4838709677419, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22397; Mature: 22397

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRCTVVPPASLRSFQPFLNFVPMFAALLVAVLLAPYASAVRADTVFTVTSANLRAGAT
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
VDNAQVLDRYDCKGQNRSPQLSWHNPPDGTRSFAVTMFDPDAPGRGWWHWAVTGIPATVD
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHHH
RLPENASASGFLKKLGAVEARNDFDIDGYGGPCPPPGKPHRYVITVYALNTSNLRLAQGR
HCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCC
PSLMFDHEISTATLGYARMIVTYGR
CCEEEECCCCHHHHHHEEEEEEECC
>Mature Secondary Structure
MRLRCTVVPPASLRSFQPFLNFVPMFAALLVAVLLAPYASAVRADTVFTVTSANLRAGAT
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
VDNAQVLDRYDCKGQNRSPQLSWHNPPDGTRSFAVTMFDPDAPGRGWWHWAVTGIPATVD
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHHH
RLPENASASGFLKKLGAVEARNDFDIDGYGGPCPPPGKPHRYVITVYALNTSNLRLAQGR
HCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCC
PSLMFDHEISTATLGYARMIVTYGR
CCEEEECCCCHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]